Jörg Rahnenführer

Orcid: 0000-0002-8947-440X

According to our database1, Jörg Rahnenführer authored at least 54 papers between 2002 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
LDAPrototype: a model selection algorithm to improve reliability of latent Dirichlet allocation.
PeerJ Comput. Sci., 2024

2023
Designs for the simultaneous inference of concentration-response curves.
BMC Bioinform., December, 2023

Debunking Disinformation with GADMO: A Topic Modeling Analysis of a Comprehensive Corpus of German-language Fact-Checks.
Proceedings of the 4th Conference on Language, Data and Knowledge, 2023

2022
Correction to: Combining heterogeneous subgroups with graph-structured variable selection priors for Cox regression.
BMC Bioinform., 2022

Benchmark of filter methods for feature selection in high-dimensional gene expression survival data.
Briefings Bioinform., 2022

Survival Prediction and Model Selection.
Proceedings of the Machine Learning under Resource Constraints - Volume 3: Applications, 2022

Editorial.
Proceedings of the Machine Learning under Resource Constraints - Volume 3: Applications, 2022

2021
Implications on Feature Detection When Using the Benefit-Cost Ratio.
SN Comput. Sci., 2021

MODES: model-based optimization on distributed embedded systems.
Mach. Learn., 2021

Weighted Cox regression for the prediction of heterogeneous patient subgroups.
BMC Medical Informatics Decis. Mak., 2021

Combining heterogeneous subgroups with graph-structured variable selection priors for Cox regression.
BMC Bioinform., 2021

Employing an Adjusted Stability Measure for Multi-criteria Model Fitting on Data Sets with Similar Features.
Proceedings of the Machine Learning, Optimization, and Data Science, 2021

RollingLDA: An Update Algorithm of Latent Dirichlet Allocation to Construct Consistent Time Series from Textual Data.
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2021, 2021

2020
Benchmark for filter methods for feature selection in high-dimensional classification data.
Comput. Stat. Data Anal., 2020

Feature Selection Methods for Cost-Constrained Classification in Random Forests.
CoRR, 2020

Improving Reliability of Latent Dirichlet Allocation by Assessing Its Stability Using Clustering Techniques on Replicated Runs.
CoRR, 2020

Cost-Constrained feature selection in binary classification: adaptations for greedy forward selection and genetic algorithms.
BMC Bioinform., 2020

Assessing the Uncertainty of the Text Generating Process Using Topic Models.
Proceedings of the ECML PKDD 2020 Workshops, 2020

Improving Latent Dirichlet Allocation: On Reliability of the Novel Method LDAPrototype.
Proceedings of the Natural Language Processing and Information Systems, 2020

Adjusted Measures for Feature Selection Stability for Data Sets with Similar Features.
Proceedings of the Machine Learning, Optimization, and Data Science, 2020

Model-based optimization with concept drifts.
Proceedings of the GECCO '20: Genetic and Evolutionary Computation Conference, 2020

2019
Model-based optimization of subgroup weights for survival analysis.
Bioinform., 2019

High Dimensional Restrictive Federated Model Selection with Multi-objective Bayesian Optimization over Shifted Distributions.
Proceedings of the Intelligent Systems and Applications, 2019

2017
A Multicriteria Approach to Find Predictive and Sparse Models with Stable Feature Selection for High-Dimensional Data.
Comput. Math. Methods Medicine, 2017

DISMS2: A flexible algorithm for direct proteome- wide distance calculation of LC-MS/MS runs.
BMC Bioinform., 2017

Variable selection for disease progression models: methods for oncogenetic trees and application to cancer and HIV.
BMC Bioinform., 2017

RAMBO: Resource-Aware Model-Based Optimization with Scheduling for Heterogeneous Runtimes and a Comparison with Asynchronous Model-Based Optimization.
Proceedings of the Learning and Intelligent Optimization - 11th International Conference, 2017

2016
Machine Learning meets Data-Driven Journalism: Boosting International Understanding and Transparency in News Coverage.
CoRR, 2016

TiMEx: a waiting time model for mutually exclusive cancer alterations.
Bioinform., 2016

Faster Model-Based Optimization Through Resource-Aware Scheduling Strategies.
Proceedings of the Learning and Intelligent Optimization - 10th International Conference, 2016

2015
Invited presentations, junior research groups and research highlights at GCB 2015.
PeerJ Prepr., 2015

Poster abstracts of GCB 2015.
PeerJ Prepr., 2015

2011
Modelling non-stationary dynamic gene regulatory processes with the BGM model.
Comput. Stat., 2011

Survival models with preclustered gene groups as covariates.
BMC Bioinform., 2011

2010
YLoc - an interpretable web server for predicting subcellular localization.
Nucleic Acids Res., 2010

Comparison of scores for bimodality of gene expression distributions and genome-wide evaluation of the prognostic relevance of high-scoring genes.
BMC Bioinform., 2010

Going from where to why - interpretable prediction of protein subcellular localization.
Bioinform., 2010

Modelling Nonstationary Gene Regulatory Processes.
Adv. Bioinformatics, 2010

2009
Retention time alignment algorithms for LC/MS data must consider non-linear shifts.
Bioinform., 2009

2008
Stability analysis of mixtures of mutagenetic trees.
BMC Bioinform., 2008

Rtreemix: an R package for estimating evolutionary pathways and genetic progression scores.
Bioinform., 2008

Applications of semantic similarity measures.
Proceedings of the Ontologies and Text Mining for Life Sciences: Current Status and Future Perspectives, 24.03., 2008

2007
Conformational analysis of alternative protein structures.
Bioinform., 2007

2006
A new measure for functional similarity of gene products based on Gene Ontology.
BMC Bioinform., 2006

Improved scoring of functional groups from gene expression data by decorrelating GO graph structure.
Bioinform., 2006

2005
Learning Multiple Evolutionary Pathways from Cross-Sectional Data.
J. Comput. Biol., 2005

Confirmation of human protein interaction data by human expression data.
BMC Bioinform., 2005

Estimating cancer survival and clinical outcome based on genetic tumor progression scores.
Bioinform., 2005

Computational methods for the design of effective therapies against drug resistant HIV strains.
Bioinform., 2005

Mtreemix: a software package for learning and using mixture models of mutagenetic trees.
Bioinform., 2005

2004
Hybrid clustering for microarray image analysis combining intensity and shape features.
BMC Bioinform., 2004

Predicting protein structure classes from function predictions.
Bioinform., 2004

2002
Multivariate permutation tests for the k-sample problem with clustered data.
Comput. Stat., 2002

Unsupervised technique for robust target separation and analysis of DNA microarray spots through adaptive pixel clustering.
Bioinform., 2002


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