Jonathan D. Tyzack

Orcid: 0000-0003-4827-9023

Affiliations:
  • Unilever Centre for Molecular Science Informatics, Cambridge, UK


According to our database1, Jonathan D. Tyzack authored at least 13 papers between 2012 and 2024.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
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PhD thesis 
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Links

Online presence:

On csauthors.net:

Bibliography

2024
Large-scale annotation of biochemically relevant pockets and tunnels in cognate enzyme-ligand complexes.
J. Cheminformatics, December, 2024

2022
GRaSP-web: a machine learning strategy to predict binding sites based on residue neighborhood graphs.
Nucleic Acids Res., 2022

2020
PDBe-KB: a community-driven resource for structural and functional annotations.
Nucleic Acids Res., 2020

2019
Finding enzyme cofactors in Protein Data Bank.
Bioinform., 2019

2018
Mechanism and Catalytic Site Atlas (M-CSA): a database of enzyme reaction mechanisms and active sites.
Nucleic Acids Res., 2018

WhichP450: a multi-class categorical model to predict the major metabolising CYP450 isoform for a compound.
J. Comput. Aided Mol. Des., 2018

Transform-MinER: transforming molecules in enzyme reactions.
Bioinform., 2018

2016
Predicting Regioselectivity and Lability of Cytochrome P450 Metabolism Using Quantum Mechanical Simulations.
J. Chem. Inf. Model., 2016

2014
Cytochrome P450 site of metabolism prediction from 2D topological fingerprints using GPU accelerated probabilistic classifiers.
J. Cheminformatics, 2014

2013
Prediction of Cytochrome P450 Xenobiotic Metabolism: Tethered Docking and Reactivity Derived from Ligand Molecular Orbital Analysis.
J. Chem. Inf. Model., 2013

FAst MEtabolizer (FAME): A Rapid and Accurate Predictor of Sites of Metabolism in Multiple Species by Endogenous Enzymes.
J. Chem. Inf. Model., 2013

2012
Computational Prediction of Metabolism: Sites, Products, SAR, P450 Enzyme Dynamics, and Mechanisms.
J. Chem. Inf. Model., 2012

Probabilistic classifier: generated using randomised sub-sampling of the feature space.
J. Cheminformatics, 2012


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