John W. Pinney

According to our database, John W. Pinney authored at least 14 papers between 2006 and 2015.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2015

PathwayBooster: a tool to support the curation of metabolic pathways.

Rodrigo Liberal, Beata K. Lisowska, David J. Leak, John W. Pinney

BMC Bioinform., 2015

2013

Analysis of Metabolic Evolution in Bacteria Using Whole-Genome Metabolic Models.

William A. Bryant, Ali A. Faruqi, John W. Pinney

J. Comput. Biol., 2013

AMBIENT: Active Modules for Bipartite Networks - using high-throughput transcriptomic data to dissect metabolic response.

William A. Bryant, Michael J. E. Sternberg, John W. Pinney

BMC Syst. Biol., 2013

Simple topological properties predict functional misannotations in a metabolic network.

Rodrigo Liberal, John W. Pinney

Bioinform., 2013

2010

Patterns of HIV-1 Protein Interaction Identify Perturbed Host-Cellular Subsystems.

Jamie I. MacPherson, Jonathan E. Dickerson, John W. Pinney, David L. Robertson

PLoS Comput. Biol., 2010

The biological context of HIV-1 host interactions reveals subtle insights into a system hijack.

Jonathan E. Dickerson, John W. Pinney, David L. Robertson

BMC Syst. Biol., 2010

Low-complexity regions within protein sequences have position-dependent roles.

Alain Coletta, John W. Pinney, David Y. Weiss Solís, James Marsh, Steve Pettifer, Teresa K. Attwood

BMC Syst. Biol., 2010

2009

JNets: Exploring networks by integrating annotation.

Jamie I. MacPherson, John W. Pinney, David L. Robertson

BMC Bioinform., 2009

2008

Identifying the Important HIV-1 Recombination Breakpoints.

John P. Archer, John W. Pinney, Jun Fan, Etienne Simon-Loriere, Eric J. Arts, Matteo Negroni, David L. Robertson

PLoS Comput. Biol., 2008

Methodology capture: discriminating between the "best" and the rest of community practice.

James M. Eales, John W. Pinney, Robert D. Stevens, David L. Robertson

BMC Bioinform., 2008

2007

SHARKview: a tool for the visualization of systems biology data.

John W. Pinney, John M. Starkovich, Peter Li, David L. Robertson

BMC Syst. Biol., 2007

An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network.

Brian J. Holden, John W. Pinney, Simon C. Lovell, Grigoris D. Amoutzias, David L. Robertson

BMC Bioinform., 2007

2006

<i>Arabidopsis</i> Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis.

Iain W. Manfield, Chih-Hung Jen, John W. Pinney, Ioannis Michalopoulos, James R. Bradford, Philip M. Gilmartin, David R. Westhead

Nucleic Acids Res., 2006

metaSHARK: a WWW platform for interactive exploration of metabolic networks.

Christopher Hyland, John W. Pinney, Glenn A. McConkey, David R. Westhead

Nucleic Acids Res., 2006