John T. Prince

According to our database, John T. Prince authored at least 15 papers between 2006 and 2015.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2015

Current controlled vocabularies are insufficient to uniquely map molecular entities to mass spectrometry signal.

Robert Smith, Ryan M. Taylor, John T. Prince

BMC Bioinform., 2015

A coherent mathematical characterization of isotope trace extraction, isotopic envelope extraction, and LC-MS correspondence.

Robert Smith, John T. Prince, Dan Ventura

BMC Bioinform., 2015

Automated structural classification of lipids by machine learning.

Ryan M. Taylor, Ryan H. Miller, Ryan D. Miller, Michael Porter, James Dalgleish, John T. Prince

Bioinform., 2015

JAMSS: proteomics mass spectrometry simulation in Java.

Robert Smith, John T. Prince

Bioinform., 2015

LC-MS alignment in theory and practice: a comprehensive algorithmic review.

Robert Smith, Dan Ventura, John T. Prince

Briefings Bioinform., 2015

2014

Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view.

Robert Smith, Andrew D. Mathis, Dan Ventura, John T. Prince

BMC Bioinform., 2014

Massifquant: open-source Kalman filter-based XC-MS isotope trace feature detection.

Christopher J. Conley, Robert Smith, Ralf J. O. Torgrip, Ryan M. Taylor, Ralf Tautenhahn, John T. Prince

Bioinform., 2014

Controlling for confounding variables in MS-omics protocol: why modularity matters.

Robert Smith, Dan Ventura, John T. Prince

Briefings Bioinform., 2014

2013

Rubabel: Wrapping OpenBabel with Ruby.

Robert Smith, Ryan Williamson, Dan Ventura, John T. Prince

J. Cheminformatics, 2013

Metriculator: quality assessment for mass spectrometry-based proteomics.

Ryan M. Taylor, Jamison Dance, Russ J. Taylor, John T. Prince

Bioinform., 2013

Novel algorithms and the benefits of comparative validation.

Robert Smith, Dan Ventura, John T. Prince

Bioinform., 2013

Statistical agglomeration: peak summarization for direct infusion lipidomics.

Robert Smith, Tamil S. Anthonymuthu, Dan Ventura, John T. Prince

Bioinform., 2013

2009

Integrating shotgun proteomics and mRNA expression data to improve protein identification.

Smriti R. Ramakrishnan, Christine Vogel, John T. Prince, Rong Wang, Zhihua Li, Luiz O. F. Penalva, Margaret Myers, Edward M. Marcotte, Daniel P. Miranker

Bioinform., 2009

2008

mspire: mass spectrometry proteomics in Ruby.

John T. Prince, Edward M. Marcotte

Bioinform., 2008

2006

A fast coarse filtering method for peptide identification by mass spectrometry.

Smriti R. Ramakrishnan, Rui Mao, Aleksey A. Nakorchevskiy, John T. Prince, Willard S. Willard, Weijia Xu, Edward M. Marcotte, Daniel P. Miranker

Bioinform., 2006