John M. Hancock

According to our database, John M. Hancock authored at least 32 papers between 1994 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Making PBPK models more reproducible in practice.

Elena Domínguez Romero, Stanislav Mazurenko, Martin Scheringer, Vítor A. P. Martins dos Santos, Chris T. A. Evelo, Mihail Anton, John M. Hancock, Anze Zupanic, María Suárez-Diez

Briefings Bioinform., 2024

2020

PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins.

Patryk Jarnot, Joanna Ziemska-Legiecka, Laszlo Dobson, Matthew Merski, Pablo Mier, Miguel A. Andrade-Navarro, John M. Hancock, Zsuzsanna Dosztányi, Lisanna Paladin, Marco Necci, Damiano Piovesan, Silvio C. E. Tosatto, Vasilis J. Promponas, Marcin Grynberg, Aleksandra Gruca

Nucleic Acids Res., 2020

The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research.

David Salgado, Irina M. Armean, Michael Baudis, Sergi Beltran, Salvador Capella-Gutiérrez, Denise Carvalho-Silva, Victoria Dominguez Del Angel, Joaquín Dopazo, Laura I. Furlong, Bo Gao, Leyla Jael García Castro, Dietlind Gerloff, Ivo Glynne Gut, Attila Gyenesei, Nina Habermann, John M. Hancock, Marc Hanauer, Eivind Hovig, Lennart F. Johansson, Thomas Keane, Jan Korbel, Katharina B. Lauer, Steve Laurie, Brane Leskosek, David Lloyd, Tomàs Marquès-Bonet, Hailiang Mei, Katalin Monostory, Janet Piñero, Krzysztof Poterlowicz, Ana Rath, Pubudu Samarakoon, Ferran Sanz, Gary Saunders, Daoud Sie, Morris A. Swertz, Kirill Tsukanov, Alfonso Valencia, Marko Vidak, Cristina Yenyxe González, Bauke Ylstra, Christophe Béroud

F1000Research, 2020

Disentangling the complexity of low complexity proteins.

Pablo Mier, Lisanna Paladin, Stella Tamana, Sophia Petrosian, Borbála Hajdu-Soltész, Annika Urbanek, Aleksandra Gruca, Dariusz Plewczynski, Marcin Grynberg, Pau Bernadó, Zoltán Gáspári, Christos A. Ouzounis, Vasilis J. Promponas, Andrey V. Kajava, John M. Hancock, Silvio C. E. Tosatto, Zsuzsanna Dosztányi, Miguel A. Andrade-Navarro

Briefings Bioinform., 2020

Community curation of bioinformatics software and data resources.

Jon C. Ison, Hervé Ménager, Bryan Brancotte, Erik Jaaniso, Ahto Salumets, Tomás Racek, Anna-Lena Lamprecht, Magnus Palmblad, Matús Kalas, Piotr Chmura, John M. Hancock, Veit Schwämmle, Hans-Ioan Ienasescu

Briefings Bioinform., 2020

2017

PIsCO: A Performance indicators framework for collection of bioinformatics resource metrics.

Haydee Artaza, John M. Hancock, Rafael C. Jiménez, Manuel Corpas

PeerJ Prepr., 2017

Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action.

Aleksandra Pawlik, Celia W. G. van Gelder, Aleksandra Nenadic, Patricia M. Palagi, Eija Korpelainen, Philip Lijnzaad, Diana Marek, Susanna-Assunta Sansone, John M. Hancock, Carole A. Goble

F1000Research, 2017

Introducing the Brassica Information Portal: Towards integrating genotypic and phenotypic Brassica crop data.

Annemarie H. Eckes, Tomasz Gubala, Piotr Nowakowski, Tomasz Szymczyszyn, Rachel Wells, Judith A. Irwin, Carlos Horro, John M. Hancock, Graham J. King, Sarah C. Dyer, Wiktor Jurkowski

F1000Research, 2017

BioCIDER: a Contextualisation InDEx for biological Resources discovery.

Carlos Horro, Martin Cook, Teresa K. Attwood, Michelle D. Brazas, John M. Hancock, Patricia M. Palagi, Manuel Corpas, Rafael C. Jiménez

Bioinform., 2017

2013

NucleoFinder: a statistical approach for the detection of nucleosome positions.

Jérémie Becker, Christopher Yau, John M. Hancock, Christopher C. Holmes

Bioinform., 2013

2011

Anatomy ontologies and potential users: bridging the gap.

Ravensara S. Travillian, Tomasz Adamusiak, Tony Burdett, Michael Gruenberger, John M. Hancock, Ann-Marie Mallon, James Malone, Paul N. Schofield, Helen E. Parkinson

J. Biomed. Semant., 2011

Towards BioDBcore: a community-defined information specification for biological databases.

Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna-Assunta Sansone, Chris F. Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake, Carol J. Bult, J. Michael Cherry, Rex L. Chisholm, Guy Cochrane, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin, Robert Gentleman, Carole A. Goble, Takashi Gojobori, John M. Hancock, Douglas G. Howe, Tadashi Imanishi, Janet Kelso, David Landsman, Suzanna E. Lewis, Ilene Karsch-Mizrachi, Sandra E. Orchard, B. F. Francis Ouellette, Shoba Ranganathan, Lorna J. Richardson, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki

Database J. Biol. Databases Curation, 2011

The Vertebrate Bridging Ontology (VBO).

Ravensara S. Travillian, James Malone, Chao Pang, John M. Hancock, Peter W. H. Holland, Paul N. Schofield, Helen E. Parkinson

Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

2010

EuroPhenome: a repository for high-throughput mouse phenotyping data.

Hugh Morgan, Tim Beck, Andrew Blake, Hilary Gates, Niels C. Adams, Guillaume Debouzy, Sophie Leblanc, Christoph Lengger, Holger Maier, David G. Melvin, Hamid Meziane, Dave Richardson, Sara Wells, Jacqui White, Joe Wood, Martin Hrabé de Angelis, Steve D. M. Brown, John M. Hancock, Ann-Marie Mallon

Nucleic Acids Res., 2010

MouseBook: an integrated portal of mouse resources.

Andrew Blake, Karen Pickford, Simon Greenaway, Steve Thomas, Amanda J. Pickard, Christine M. Williamson, Niels C. Adams, Alison Walling, Tim Beck, Martin Fray, Jo Peters, Tom Weaver, Steve D. M. Brown, John M. Hancock, Ann-Marie Mallon

Nucleic Acids Res., 2010

Mouse Resource Browser - a database of mouse databases.

Michael Zouberakis, Christina Chandras, Morris A. Swertz, Damian Smedley, Michael Gruenberger, Jonathan B. L. Bard, Klaus Schughart, Nadia A. Rosenthal, John M. Hancock, Paul N. Schofield, George Kollias, Vassilis Aidinis

Database J. Biol. Databases Curation, 2010

Finding and sharing: new approaches to registries of databases and services for the biomedical sciences.

Damian Smedley, Paul N. Schofield, Chao-Kung Chen, Vassilis Aidinis, Crysanthi Ainali, Jonathan B. L. Bard, Rudi Balling, Ewan Birney, Andrew Blake, Erik Bongcam-Rudloff, Anthony J. Brookes, Gianni Cesareni, Christina Chandras, Janan T. Eppig, Paul Flicek, Georgios V. Gkoutos, Simon Greenaway, Michael Gruenberger, Jean-Karim Hériché, Andrew Lyall, Ann-Marie Mallon, Dawn Muddyman, Florian Reisinger, Martin Ringwald, Nadia A. Rosenthal, Klaus Schughart, Morris A. Swertz, Gudmundur A. Thorisson, Michael Zouberakis, John M. Hancock

Database J. Biol. Databases Curation, 2010

2009

Practical application of ontologies to annotate and analyse large scale raw mouse phenotype data.

Tim Beck, Hugh Morgan, Andrew Blake, Sara Wells, John M. Hancock, Ann-Marie Mallon

BMC Bioinform., 2009

Phylogenetic inference under recombination using Bayesian stochastic topology selection.

Alex Webb, John M. Hancock, Christopher C. Holmes

Bioinform., 2009

Models for financial sustainability of biological databases and resources.

Christina Chandras, Thomas Weaver, Michael Zouberakis, Damian Smedley, Klaus Schughart, Nadia A. Rosenthal, John M. Hancock, George Kollias, Paul N. Schofield, Vassilis Aidinis

Database J. Biol. Databases Curation, 2009

2008

EuroPhenome and EMPReSS: online mouse phenotyping resource.

Ann-Marie Mallon, Andrew Blake, John M. Hancock

Nucleic Acids Res., 2008

Solutions for data integration in functional genomics: a critical assessment and case study.

Damian Smedley, Morris A. Swertz, Katy Wolstencroft, Glenn Proctor, Michael Zouberakis, Jonathan B. L. Bard, John M. Hancock, Paul N. Schofield

Briefings Bioinform., 2008

ENFIN - An Integrative Structure for Systems Biology.

Florian Reisinger, Manuel Corpas, John M. Hancock, Henning Hermjakob, Ewan Birney, Pascal Kahlem

Proceedings of the Data Integration in the Life Sciences, 5th International Workshop, 2008

The Mouse Resource Browser (MRB) - A near-complete registry of mouse resources.

Michael Zouberakis, Christina Chandras, John M. Hancock, Paul N. Schofield, Vassilis Aidinis

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

CASIMIR: Coordination and Sustainability of International Mouse Informatics Resources.

John M. Hancock, Paul N. Schofield, Christina Chandras, Michael Zouberakis, Vassilis Aidinis, Damian Smedley, Nadia A. Rosenthal, Klaus Schughart

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

Digital preservation - financial sustainability of biological data and material resources.

Christina Chandras, Tom Weaver, Michael Zouberakis, John M. Hancock, Paul N. Schofield, Vassilis Aidinis

Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, 2008

2005

EMPReSS: European Mouse Phenotyping Resource for Standardized Screens.

Eain C. J. Green, Georgios V. Gkoutos, Heena V. Lad, Andrew Blake, Joseph Weekes, John M. Hancock

Bioinform., 2005

CRAVE: a database, middleware and visualization system for phenotype ontologies.

Georgios V. Gkoutos, Eain C. J. Green, Simon Greenaway, Andrew Blake, Ann-Marie Mallon, John M. Hancock

Bioinform., 2005

2004

Building Mouse Phenotype Ontologies.

Georgios V. Gkoutos, Eain C. J. Green, Ann-Marie Mallon, John M. Hancock, Duncan Davidson

Proceedings of the Biocomputing 2004, 2004

2003

PlantProm: a database of plant promoter sequences.

Ilham A. Shahmuradov, Alex J. Gammerman, John M. Hancock, Peter M. Bramley, Victor V. Solovyev

Nucleic Acids Res., 2003

2002

Detecting cryptically simple protein sequences using the SIMPLE algorithm.

M. Mar Albà, Roman A. Laskowski, John M. Hancock

Bioinform., 2002

1994

SIMPLE34: an improved and enhanced implementation for VAX and Sun computers of the SIMPLE algorithm for analysis of clustered repetitive motifs in nucleotide sequences.

John M. Hancock, John S. Armstrong

Comput. Appl. Biosci., 1994