John H. Holmes

Orcid: 0000-0003-2167-3602

According to our database1, John H. Holmes authored at least 88 papers between 1997 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
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Links

On csauthors.net:

Bibliography

2023
The IHI Rochester Report 2022 on Healthcare Informatics Research: Resuming After the CoViD-19.
J. Heal. Informatics Res., June, 2023

Informative missingness: What can we learn from patterns in missing laboratory data in the electronic health record?
J. Biomed. Informatics, March, 2023

Global Health Informatics: the state of research and lessons learned.
J. Am. Medical Informatics Assoc., March, 2023

Resuming HealthCare Informatics Research after CoViD-19: the HealthCare System Perspective.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

2022
International electronic health record-derived post-acute sequelae profiles of COVID-19 patients.
npj Digit. Medicine, 2022

SurvMaximin: Robust federated approach to transporting survival risk prediction models.
J. Biomed. Informatics, 2022

A manifesto on explainability for artificial intelligence in medicine.
Artif. Intell. Medicine, 2022

Acute Kidney Injury Prediction with Gradient Boosting Decision Trees enriched with Temporal Features.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Distinguishing Admissions Specifically for COVID-19 from Incidental SARS-CoV-2 Admissions.
Proceedings of the AMIA 2022, 2022

2021
Harnessing electronic health records to study emerging environmental disasters: a proof of concept with perfluoroalkyl substances (PFAS).
npj Digit. Medicine, 2021

Leveraging data and information systems on the sustainable development goals.
Int. J. Medical Informatics, 2021

A Reproducible ETL Approach for Window-based Prediction of Acute Kidney Injury in Critical Care Unit and Some Preliminary Results with Support Vector Machines.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

Temporal Phenotypic Pathways of Post-Acute Sequelae of SARS-CoV-2 by an International Consortium for Clinical Characterization of COVID-19 (4CE).
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
Learning from local to global: An efficient distributed algorithm for modeling time-to-event data.
J. Am. Medical Informatics Assoc., 2020

Learning from electronic health records across multiple sites: A communication-efficient and privacy-preserving distributed algorithm.
J. Am. Medical Informatics Assoc., 2020

Ideas for how informaticians can get involved with COVID-19 research.
BioData Min., 2020

Using topological data analysis and pseudo time series to infer temporal phenotypes from electronic health records.
Artif. Intell. Medicine, 2020

Mining post-surgical care processes in breast cancer patients.
Artif. Intell. Medicine, 2020

Building Trajectories Over Topology with TDA-PTS: An Application in Modelling Temporal Phenotypes of Disease.
Proceedings of the ECML PKDD 2020 Workshops, 2020

Explainable Artificial Intelligence (XAI): Current Approaches and Paths to the Future.
Proceedings of the AMIA 2020, 2020

Harnessing Electronic Health Records to Study Emerging Environmental Disasters: A Proof of Concept with PFAS.
Proceedings of the AMIA 2020, 2020

2019

Model Performance Metrics in Assessing the Value of Adding Intraoperative Data for Death Prediction: Applications to Noncardiac Surgery.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019

Agent-Based Models and Spatial Enablement: A Simulation Tool to Improve Health and Wellbeing in Big Cities.
Proceedings of the Artificial Intelligence in Medicine, 2019

Inferring Temporal Phenotypes with Topological Data Analysis and Pseudo Time-Series.
Proceedings of the Artificial Intelligence in Medicine, 2019

2018
Development and validation of the PEPPER framework (Prenatal Exposure PubMed ParsER) with applications to food additives.
J. Am. Medical Informatics Assoc., 2018

Preface: AIME 2017.
Artif. Intell. Medicine, 2018

Attribute tracking: strategies towards improved detection and characterization of complex associations.
Proceedings of the Genetic and Evolutionary Computation Conference, 2018

Implementation Science for Global Health Informatics Projects.
Proceedings of the AMIA 2018, 2018

Applying Predictive Analytics on Administrative and Perioperative Data to Assess Physician Decision Making and Post-Operative Testing for Acute Myocardial Infarction.
Proceedings of the AMIA 2018, 2018

Construction of PEPPER: Prenatal Exposure Pubmed ParsER.
Proceedings of the AMIA 2018, 2018

2017
Text mining applied to electronic cardiovascular procedure reports to identify patients with trileaflet aortic stenosis and coronary artery disease.
J. Biomed. Informatics, 2017

Temporal electronic phenotyping by mining careflows of breast cancer patients.
J. Biomed. Informatics, 2017

A System for Accessible Artificial Intelligence.
CoRR, 2017

Artificial Intelligence in Medicine AIME 2015.
Artif. Intell. Medicine, 2017

Predicting clinical outcomes in patients with traumatic bleeding: A secondary analysis of the CRASH-2 dataset.
Proceedings of the 3rd IEEE International Forum on Research and Technologies for Society and Industry, 2017

A System for Accessible Artificial Intelligence.
Proceedings of the Genetic Programming Theory and Practice XV, 2017

Nurse Generated EHR Data Supports Post-Acute Care Referral Decision Making: Development and Validation of a Two-step Algorithm.
Proceedings of the AMIA 2017, 2017

2016
Participatory design of ehealth solutions for women from vulnerable populations with perinatal depression.
J. Am. Medical Informatics Assoc., 2016

The role of tablets in accessing information throughout undergraduate medical education in Botswana.
Int. J. Medical Informatics, 2016

The golden era of biomedical informatics has begun.
BioData Min., 2016

Using Electronic Case Summaries to Elicit Multi-Disciplinary Expert Knowledge about Referrals to Post-Acute Care.
Appl. Clin. Inform., 2016

2015
Collaborative Filtering for Estimating Health Related Utilities in Decision Support Systems.
Proceedings of the Artificial Intelligence in Medicine, 2015

2014
Methods and applications of evolutionary computation in biomedicine.
J. Biomed. Informatics, 2014

Clinical research data warehouse governance for distributed research networks in the USA: a systematic review of the literature.
J. Am. Medical Informatics Assoc., 2014

Temporal data mining and process mining techniques to identify cardiovascular risk-associated clinical pathways in Type 2 diabetes patients.
Proceedings of IEEE-EMBS International Conference on Biomedical and Health Informatics, 2014

Use of Patient Generated Data from Social Media and Collaborative Filtering for Preferences Elicitation in Shared Decision Making.
Proceedings of the 2014 AAAI Fall Symposia, Arlington, Virginia, USA, November 13-15, 2014, 2014

2013
Big Data Analytics in Biomedicine and Health: Trends and Challenges.
Proceedings of the MEDINFO 2013, 2013

Informatics Capacity Building in the Developing World - Working Towards an International Educational Model and Curriculum.
Proceedings of the MEDINFO 2013, 2013

A Mobile Health Approach to Tuberculosis Contact Tracing in Resource-Limited Settings.
Proceedings of the MEDINFO 2013, 2013

Experts Speak: Advice from Key Informants to Small, Rural Hospitals on Implementing the Electronic Health Record System.
Proceedings of the MEDINFO 2013, 2013

Biomedical and Healthcare Analytics on Big Data.
Proceedings of the AMIA 2013, 2013

2012
An informatics agenda for public health: summarized recommendations from the 2011 AMIA PHI Conference.
J. Am. Medical Informatics Assoc., 2012

medpie: an information extraction package for medical message board posts.
Bioinform., 2012

HDD Terminology and Information Model Browsing Tools.
Proceedings of the AMIA 2012, 2012

2011
Identifying potential adverse effects using the web: A new approach to medical hypothesis generation.
J. Biomed. Informatics, 2011

A system for de-identifying medical message board text.
BMC Bioinform., 2011

2009
AMIA Board White Paper: Program Requirements for Fellowship Education in the Subspecialty of Clinical Informatics.
J. Am. Medical Informatics Assoc., 2009

AMIA Board White Paper: Core Content for the Subspecialty of Clinical Informatics.
J. Am. Medical Informatics Assoc., 2009

2008
Learning Classifier Systems in Data Mining: An Introduction.
Proceedings of the Learning Classifier Systems in Data Mining, 2008

2007
Intelligent data analysis in biomedicine.
J. Biomed. Informatics, 2007

2006
Knowledge-based data analysis and interpretation.
Artif. Intell. Medicine, 2006

2005
Three Methods for Covering Missing Input Data in XCS.
Proceedings of the Learning Classifier Systems, International Workshops, 2005

The EpiXCS Workbench: A Tool for Experimentation and Visualization.
Proceedings of the Learning Classifier Systems, International Workshops, 2005

Detection of Sentinel Predictor-Class Associations with XCS: A Sensitivity Analysis.
Proceedings of the Learning Classifier Systems, International Workshops, 2005

Visual Exploration of Landmarks and Trends In the Medical Informatics Literature.
Proceedings of the AMIA 2005, 2005

CiteSpace II: Visualization and Knowledge Discovery in Bibliographic Databases.
Proceedings of the AMIA 2005, 2005

Patient Preferences for Behavioral Intervention Format: The Case for (and Against) Computerization.
Proceedings of the AMIA 2005, 2005

Rule Discovery in Epidemiologic Surveillance Data Using EpiXCS: An Evolutionary Computation Approach.
Proceedings of the Artificial Intelligence in Medicine, 2005

2003
Modeling the Workflow of Prescription Writing.
Proceedings of the 2003 ACM Symposium on Applied Computing (SAC), 2003

Computer Games May Be Good For Your Health: Shifting Healthcare Behavior Via Interactive Drama Videogames.
Proceedings of the AMIA 2003, 2003

Residents' Perspectives on the Use of the Internet to Improve Infectious Disease Reporting.
Proceedings of the AMIA 2003, 2003

Developing a Patient Intervention to Reduce Antibiotic Overuse.
Proceedings of the AMIA 2003, 2003

Expert Consensus for Discharge Referral Decisions Using Online Delphi.
Proceedings of the AMIA 2003, 2003

2002
A Guide for Developing Patient Safety Curricula for Undergraduate Medical Education.
J. Am. Medical Informatics Assoc., 2002

Learning classifier systems: New models, successful applications.
Inf. Process. Lett., 2002

The Effect of Missing Data on Learning Classifier System Learning Rate and Classification Performance.
Proceedings of the Learning Classifier Systems, 5th International Workshop, 2002

2001
A Representation for Accuracy-Based Assessment of Classifier System Prediction Performance.
Proceedings of the Advances in Learning Classifier Systems, 4th International Workshop, 2001

Physician and Patient: Communication Modeling in a Medical Environment.
Proceedings of the AMIA 2001, 2001

2000
The learning classifier system: an evolutionary computation approach to knowledge discovery in epidemiologic surveillance.
Artif. Intell. Medicine, 2000

A New Bootstrapping Method to Improve Classification Performance in Learning Classifier Systems.
Proceedings of the Parallel Problem Solving from Nature, 2000

Applying a Learning Classifier System to Mining Explanatory and Predictive Models from a Large Clinical Database.
Proceedings of the Advances in Learning Classifier Systems, Third International Workshop, 2000

HEART SENSE: A Game-based Approach to Reducing Delay in Seeking Care for Acute Coronary Syndrome.
Proceedings of the AMIA 2000, 2000

Discovery of predictive models in an injury surveillance database: an application of data mining in clinical research.
Proceedings of the AMIA 2000, 2000

1999
Learning Classifier Systems Applied to Knowledge Discovery in Clinical Research Databases.
Proceedings of the Learning Classifier Systems, From Foundations to Applications, 1999

The Study Design Consultant: A CLIPS/CGI-Mediated Approach to Deploying Expert Systems on the World Wide Web.
Proceedings of the AMIA 1999, 1999

1998
The Partners for Child Passenger Safety Project: An Information Infrastructure for Injury Surveillance.
Proceedings of the AMIA 1998, 1998

1997
Discovering Risk of Disease with a Learning Classifier System.
Proceedings of the 7th International Conference on Genetic Algorithms, 1997


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