John D. Holliday

According to our database1, John D. Holliday authored at least 35 papers between 1989 and 2015.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2015
Calculation of Substructural Analysis Weights Using a Genetic Algorithm.
J. Chem. Inf. Model., 2015

Maximum Common Substructure-Based Data Fusion in Similarity Searching.
J. Chem. Inf. Model., 2015

2014
The use of 2D fingerprint methods to support the assessment of structural similarity in orphan drug legislation.
J. Cheminformatics, 2014

2013
Comparison of chemical similarity measures using different numbers of query structures.
J. Inf. Sci., 2013

2012
Similarity Coefficients for Binary Chemoinformatics Data: Overview and Extended Comparison Using Simulated and Real Data Sets.
J. Chem. Inf. Model., 2012

Interactions Between Weighting Scheme and Similarity Coefficient in Similarity-Based Virtual Screening.
Int. J. Chemoinformatics Chem. Eng., 2012

2011
Multiple search methods for similarity-based virtual screening: analysis of search overlap and precision.
J. Cheminformatics, 2011

Representation and Searching of Chemical-Structure Information in Patents.
Proceedings of the Current Challenges in Patent Information Retrieval, 2011

2010
Inverse Frequency Weighting of Fragments for Similarity-Based Virtual Screening.
J. Chem. Inf. Model., 2010

2009
Turbo similarity searching: Effect of fingerprint and dataset on virtual-screening performance.
Stat. Anal. Data Min., 2009

Comparison of Nonbinary Similarity Coefficients for Similarity Searching, Clustering and Compound Selection.
J. Chem. Inf. Model., 2009

Effect of Data Standardization on Chemical Clustering and Similarity Searching.
J. Chem. Inf. Model., 2009

A Machine Learning Approach to Weighting Schemes in the Data Fusion of Similarity Coefficients.
J. Chem. Inf. Model., 2009

Analysis and use of fragment-occurrence data in similarity-based virtual screening.
J. Comput. Aided Mol. Des., 2009

Enhancing the Effectiveness of Fingerprint-Based Virtual Screening: Use of Turbo Similarity Searching and of Fragment Frequencies of Occurrence.
Proceedings of the Pattern Recognition in Bioinformatics, 2009

2008
Comparison of Similarity Coefficients for Clustering and Compound Selection.
J. Chem. Inf. Model., 2008

Structure and singly occupied molecular orbital analysis of anionic tautomers of guanine.
J. Comput. Chem., 2008

2004
Clustering Files of Chemical Structures Using the Fuzzy <i>k</i>-Means Clustering Method.
J. Chem. Inf. Model., 2004

2003
Chemoinformatics Research at the University of Sheffield: A History and Citation Analysis.
J. Inf. Sci., 2003

Combination of Fingerprint-Based Similarity Coefficients Using Data Fusion.
J. Chem. Inf. Comput. Sci., 2003

Analysis and Display of the Size Dependence of Chemical Similarity Coefficients.
J. Chem. Inf. Comput. Sci., 2003

Calculation of Intersubstituent Similarity Using R-Group Descriptors.
J. Chem. Inf. Comput. Sci., 2003

1996
The Sheffield Generic Structures Project-a Retrospective Review.
J. Chem. Inf. Comput. Sci., 1996

1995
Computer Storage and Retrieval of Generic Chemical Structures in Patents, 17. Evaluation of the Refined Search.
J. Chem. Inf. Comput. Sci., 1995

Computer Storage and Retrieval of Generic Chemical Structures in Patents, 16. The Refined Search: An Algorithm for Matching Components of Generic Chemical Structures at the Atom-Bond Level.
J. Chem. Inf. Comput. Sci., 1995

1994
Evaluation of the screening stages of the Sheffield Research Project on Computer Storage and Retrieval of Generic Chemical Structures in Patents.
J. Chem. Inf. Comput. Sci., 1994

1993
Computer storage and retrieval of generic chemical structures in patents. 15. Generation of topological fragment descriptors from nontopological representations of generic structure components.
J. Chem. Inf. Comput. Sci., 1993

1992
Computer storage and retrieval of generic chemical structures in patents. 14. Fragment generation from generic structures.
J. Chem. Inf. Comput. Sci., 1992

1991
Computer storage and retrieval of generic chemical structures in patents. 13. Reduced graph generation.
J. Chem. Inf. Comput. Sci., 1991

Computer storage and retrieval of generic chemical structures in patents. 12. Principles of search operations involving parameter lists: matching-relations, user-defined match levels, and transition from the reduced graph search to the refined search.
J. Chem. Inf. Comput. Sci., 1991

Computer storage and retrieval of generic chemical structures in patents. 11. Theoretical aspects of the use of structure languages in a retrieval system.
J. Chem. Inf. Comput. Sci., 1991

1989
Computer storage and retrieval of generic chemical structures in patents. 10. Assignment and logical bubble-up of ring screens for structurally explicit generics.
J. Chem. Inf. Comput. Sci., 1989

Computer storage and retrieval of generic chemical structures in patents. 9. An algorithm to find the extended set of smallest rings in structurally explicit generics.
J. Chem. Inf. Comput. Sci., 1989

Theoretical aspects of ring perception and development of the extended set of smallest rings concept.
J. Chem. Inf. Comput. Sci., 1989

Review of ring perception algorithms for chemical graphs.
J. Chem. Inf. Comput. Sci., 1989


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