Joel S. Rozowsky

According to our database, Joel S. Rozowsky authored at least 12 papers between 2005 and 2018.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2018

Novel approaches for bioinformatic analysis of salivary RNA sequencing data for development.

Karolina Elzbieta Kaczor-Urbanowicz, Yong Kim, Feng Li, Timur Galeev, Robert R. Kitchen, Mark Gerstein, Kikuye Koyano, Sung-Hee Jeong, Xiaoyan Wang, David Elashoff, So Young Kang, Su Mi Kim, Kyoung Kim, Sung Kim, David Chia, Xinshu Xiao, Joel S. Rozowsky, David T. W. Wong

Bioinform., 2018

2015

Loregic: A Method to Characterize the Cooperative Logic of Regulatory Factors.

Daifeng Wang, Koon-Kiu Yan, Cristina Sisu, Chao Cheng, Joel S. Rozowsky, William Meyerson, Mark B. Gerstein

PLoS Comput. Biol., 2015

2014

Comparative analysis of regulatory information and circuits across distant species Open.

Alan P. Boyle, Carlos L. Araya, Cathleen Brdlik, Philip Cayting, Chao Cheng, Yong Cheng, Kathryn Gardner, LaDeana W. Hillier, Judith Janette, Lixia Jiang, Dionna Kasper, Trupti Kawli, Pouya Kheradpour, Anshul Kundaje, Jingyi Jessica Li, Lijia Ma, Wei Niu, E. Jay Rehm, Joel S. Rozowsky, Matthew Slattery, Rebecca Spokony, Robert Terrell, Dionne Vafeados, Daifeng Wang, Peter Weisdepp, Yi-Chieh Wu, Dan Xie, Koon-Kiu Yan, Elise A. Feingold, Peter J. Good, Michael J. Pazin, Haiyan Huang, Peter J. Bickel, Steven E. Brenner, Valerie Reinke, Robert H. Waterston, Mark Gerstein, Kevin P. White, Manolis Kellis, Michael Snyder

Nat., 2014

2012

VAT: a computational framework to functionally annotate variants in personal genomes within a cloud-computing environment.

Lukas Habegger, Suganthi Balasubramanian, David Z. Chen, Ekta Khurana, Andrea Sboner, Arif Ozgun Harmanci, Joel S. Rozowsky, Declan Clarke, Michael Snyder, Mark Gerstein

Bioinform., 2012

2011

Construction and Analysis of an Integrated Regulatory Network Derived from High-Throughput Sequencing Data.

Chao Cheng, Koon-Kiu Yan, Woochang Hwang, Jiang Qian, Nitin Bhardwaj, Joel S. Rozowsky, Zhi John Lu, Wei Niu, Pedro Alves, Masaomi Kato, Michael Snyder, Mark Gerstein

PLoS Comput. Biol., 2011

Tiling array data analysis: a multiscale approach using wavelets.

Alexander Karpikov, Joel S. Rozowsky, Mark Gerstein

BMC Bioinform., 2011

ACT: aggregation and correlation toolbox for analyses of genome tracks.

Justin Jee, Joel S. Rozowsky, Kevin Y. Yip, Lucas Lochovsky, Robert D. Bjornson, Guoneng Zhong, Zhengdong D. Zhang, Yutao Fu, Jie Wang, Zhiping Weng, Mark Gerstein

Bioinform., 2011

RSEQtools: a modular framework to analyze RNA-Seq data using compact, anonymized data summaries.

Lukas Habegger, Andrea Sboner, Tara A. Gianoulis, Joel S. Rozowsky, Ashish Agarwal, Michael Snyder, Mark Gerstein

Bioinform., 2011

2008

Modeling ChIP Sequencing In Silico with Applications.

Zhengdong D. Zhang, Joel S. Rozowsky, Michael Snyder, Joseph T. Chang, Mark Gerstein

PLoS Comput. Biol., 2008

2007

Assessing the need for sequence-based normalization in tiling microarray experiments.

Thomas E. Royce, Joel S. Rozowsky, Mark Gerstein

Bioinform., 2007

2006

A supervised hidden markov model framework for efficiently segmenting tiling array data in transcriptional and chIP-chip experiments: systematically incorporating validated biological knowledge.

Jiang Du, Joel S. Rozowsky, Jan O. Korbel, Zhengdong D. Zhang, Thomas E. Royce, Martin H. Schultz, Michael Snyder, Mark Gerstein

Bioinform., 2006

2005

Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites.

Joel S. Rozowsky, Paul Bertone, Thomas E. Royce, Sherman Weissman, Michael Snyder, Mark Gerstein

Proceedings of the Advances in Bioinformatics and Computational Biology, 2005