João M. C. Teixeira

According to our database, João M. C. Teixeira authored at least 6 papers between 2018 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

DeepRank2: Mining 3D Protein Structures with Geometric Deep Learning.

Giulia Crocioni, Dani L. Bodor, Coos Baakman, Farzaneh M. Parizi, Daniel-T. Rademaker, Gayatri Ramakrishnan, Sven van der Burg, Dario F. Marzella, João M. C. Teixeira, Li C. Xue

J. Open Source Softw., April, 2024

2023

Local Disordered Region Sampling (LDRS) for ensemble modeling of proteins with experimentally undetermined or low confidence prediction segments.

Zi Hao Liu, João M. C. Teixeira, Oufan Zhang, Thomas E. Tsangaris, Jie Li, Claudiu C. Gradinaru, Teresa Head-Gordon, Julie D. Forman-Kay

Bioinform., December, 2023

FuzPred: a web server for the sequence-based prediction of the context-dependent binding modes of proteins.

András Hatos, João M. C. Teixeira, Susana Barrera-Vilarmau, Attila Horvath, Silvio C. E. Tosatto, Michele Vendruscolo, Mónika Fuxreiter

Nucleic Acids Res., July, 2023

SPyCi-PDB: A modular command-line interface for back-calculating experimental datatypes of protein structures.

Zi Hao Liu, Oufan Zhang, João M. C. Teixeira, Jie Li, Teresa Head-Gordon, Julie D. Forman-Kay

J. Open Source Softw., June, 2023

2020

Insights on cross-species transmission of SARS-CoV-2 from structural modeling.

João P. G. L. M. Rodrigues, Susana Barrera-Vilarmau, João M. C. Teixeira, Marija Sorokina, Elizabeth Seckel, Panagiotis L. Kastritis, Michael Levitt

PLoS Comput. Biol., 2020

2018

pdb-tools: a swiss army knife for molecular structures.

João P. G. L. M. Rodrigues, João M. C. Teixeira, Mikaël Trellet, Alexandre M. J. J. Bonvin

F1000Research, 2018