Joanna Polanska

Orcid: 0000-0001-8004-9864

According to our database1, Joanna Polanska authored at least 68 papers between 2004 and 2024.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
A mapping-free natural language processing-based technique for sequence search in nanopore long-reads.
BMC Bioinform., December, 2024

2023
Activation maps of convolutional neural networks as a tool for brain degeneration tracking in early diagnosis of dementia in Parkinson's disease based on magnetic resonance imaging.
Signal Image Video Process., November, 2023

Pathological changes or technical artefacts? The problem of the heterogenous databases in COVID-19 CXR image analysis.
Comput. Methods Programs Biomed., October, 2023

Combining low-dose CT-based radiomics and metabolomics for early lung cancer screening support.
CoRR, 2023

BRONCO: Automated modelling of the bronchovascular bundle using the Computed Tomography Images.
CoRR, 2023

Isotopic envelope identification by analysis of the spatial distribution of components in MALDI-MSI data.
CoRR, 2023

Feature Selection Methods Comparison: Logistic Regression-Based Algorithm and Neural Network Tools.
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2023

Unsupervised Investigation of Information Captured in Pathway Activity Score in scRNA-Seq Analysis.
Proceedings of the Bioinformatics and Biomedical Engineering, 2023

2022
POLCOVID: a multicenter multiclass chest X-ray database (Poland, 2020-2021).
CoRR, 2022

CIRCA: comprehensible online system in support of chest X-rays-based COVID-19 diagnosis.
CoRR, 2022

CMB-HUNT: Automatic detection of cerebral microbleeds using a deep neural network.
Comput. Biol. Medicine, 2022

DiviK: divisive intelligent K-means for hands-free unsupervised clustering in big biological data.
BMC Bioinform., 2022

How to Compare Various Clustering Outcomes? Metrices to Investigate Breast Cancer Patient Subpopulations Based on Proteomic Profiles.
Proceedings of the Bioinformatics and Biomedical Engineering, 2022

Comparison of Batch Effect Removal Methods for High Dimensional Mass Cytometry Data.
Proceedings of the Bioinformatics and Biomedical Engineering, 2022

Radiomic-Based Lung Nodule Classification in Low-Dose Computed Tomography.
Proceedings of the Bioinformatics and Biomedical Engineering, 2022

Can We Detect T Cell Receptors from Long-Read RNA-Seq Data?
Proceedings of the Bioinformatics and Biomedical Engineering, 2022

2021
May Gender Have an Impact on Methylation Profile and Survival Prognosis in Acute Myeloid Leukemia?
Proceedings of the Practical Applications of Computational Biology & Bioinformatics, 2021

Preliminary study for a fully automated pre-gating method for high-dimensional mass cytometry data.
Proceedings of the 21st IEEE International Conference on Bioinformatics and Bioengineering, 2021

2020
GaMRed - Adaptive Filtering of High-Throughput Biological Data.
IEEE ACM Trans. Comput. Biol. Bioinform., 2020

Classification supporting COVID-19 diagnostics based on patient survey data.
CoRR, 2020

Robustness of Pathway Enrichment Analysis to Transcriptome-Wide Gene Expression Platform.
Proceedings of the Practical Applications of Computational Biology & Bioinformatics, 2020

2019
Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms.
Bioinform., 2019

BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm.
Bioinform., 2019

Machine learning techniques combined with dose profiles indicate radiation response biomarkers.
Int. J. Appl. Math. Comput. Sci., 2019

Breast Cancer Heterogeneity Investigation: Multiple k-Means Clustering Approach.
Proceedings of the 19th IEEE International Conference on Bioinformatics and Bioengineering, 2019

Mathematical Modelling and Effect Size Analysis in Support of Searching for the Proteomic Signature of Radiotherapy Toxicity.
Proceedings of the 19th IEEE International Conference on Bioinformatics and Bioengineering, 2019

2018
Can an Integrative SNP Approach Substitute Standard Identification in Comprehensive Case/Control Analyses?
Proceedings of the Practical Applications of Computational Biology and Bioinformatics, 2018

Are Radiosensitive and Regular Response Cells Homogeneous in Their Correlations Between Copy Number State and Surviving Fraction After Irradiation?
Proceedings of the Bioinformatics and Biomedical Engineering, 2018

2017
MiMSeg - an algorithm for automated detection of tumor tissue on NMR apparent diffusion coefficient maps.
Inf. Sci., 2017

Ranking metrics in gene set enrichment analysis: do they matter?
BMC Bioinform., 2017

Reproducibility of Finding Enriched Gene Sets in Biological Data Analysis.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

Multidimensional Feature Selection and Interaction Mining with Decision Tree Based Ensemble Methods.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

Novel Method of Identifying DNA Methylation Fingerprint of Acute Myeloid Leukaemia.
Proceedings of the 11th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2017

Comparative Analysis of MicroRNA-Target Gene Interaction Prediction Algorithms Based on Integrated P-Value Calculation.
Proceedings of the Man-Machine Interactions 5, 2017

Improving peak detection by Gaussian mixture modeling of mass spectral signal.
Proceedings of the 3rd International Conference on Frontiers of Signal Processing, 2017

2016
DALSA: Domain Adaptation for Supervised Learning From Sparsely Annotated MR Images.
IEEE Trans. Medical Imaging, 2016

Sensitivity, Specificity and Prioritization of Gene Set Analysis When Applying Different Ranking Metrics.
Proceedings of the 10th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2016

Deep Data Analysis of a Large Microarray Collection for Leukemia Biomarker Identification.
Proceedings of the 10th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2016

Multigene P-value Integration Based on SNPs Investigation for Seeking Radiosensitivity Signatures.
Proceedings of the Bioinformatics and Biomedical Engineering, 2016

A Novel Divisive iK-Means Algorithm with Region-Driven Feature Selection as a Tool for Automated Detection of Tumour Heterogeneity in MALDI IMS Experiments.
Proceedings of the Bioinformatics and Biomedical Engineering, 2016

Comparative Analysis of microRNA-Target Gene Interaction Prediction Algorithms - The Attempt to Compare the Results of Three Algorithms.
Proceedings of the Bioinformatics and Biomedical Engineering, 2016

2015
Statistical Integration of p-values for Enhancing Discovery of Radiotoxicity Gene Signatures.
Proceedings of the Bioinformatics and Biomedical Engineering, 2015

Mixture Model Based Efficient Method for Magnetic Resonance Spectra Quantification.
Proceedings of the Bioinformatics and Biomedical Engineering, 2015

Modeling of Imaging Mass Spectrometry Data and Testing by Permutation for Biomarkers Discovery in Tissues.
Proceedings of the International Conference on Computational Science, 2015

Comparison of Black Box Implementations of Two Algorithms of Processing of NMR Spectra, Gaussian Mixture Model and Singular Value Decomposition.
Proceedings of the BIOSIGNALS 2015, 2015

Is the Identification of SNP-miRNA Interactions Supporting the Prediction of Human Lymphocyte Transcriptional Radiation Responses?.
Proceedings of the BIOINFORMATICS 2015, 2015

Überwachtes Lernen zur Prädiktion von Tumorwachstum.
Proceedings of the Bildverarbeitung für die Medizin 2015, Algorithmen - Systeme, 2015

Automatische Tumorsegmentierung mit spärlich annotierter Lernbasis.
Proceedings of the Bildverarbeitung für die Medizin 2015, Algorithmen - Systeme, 2015

2014
An Efficient Algorithm for Microarray Probes Re-annotation.
Trans. Comput. Collect. Intell., 2014

Sources of High Variance between Probe Signals in Affymetrix Short Oligonucleotide Microarrays.
Sensors, 2014

Integrating Expression Data from Different Microarray Platforms in Search of Biomarkers of Radiosensitivity.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014

Automatic detection of outlying microarrays using multi-array quality metrics.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014

Impact of missing genotype imputation on the power of Genome Wide Association Studies.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014

Improvement in the accuracy of Nuclear Magnetic Resonance spectrum analysis by automatic tuning of phase correction algorithms.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014

Modelling of Genetic Interactions in GWAS Reveals More Complex Relations between Genotype and Phenotype.
Proceedings of the BIOINFORMATICS 2014, 2014

Methods for Quality Control of Low-resolution MALDI-ToF Spectra.
Proceedings of the BIOINFORMATICS 2014, 2014

2013
Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition.
BMC Bioinform., 2013

Seeking for Genetic Signature of Radiosensitivity - Methods for Data Analysis.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

Gaussian mixture model based analysis of apparent diffusion coefficient maps for differentiation between malignant and benign brain tumours - preliminary results.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

Comparative analysis of the annotation systems of Mus musculus high density expression microarray.
Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2013

Investigation for Genetic Signature of Radiosensitivity - Data Analysis.
Proceedings of the Man-Machine Interactions 3, 2013

Comparison of Algorithms for Profile-Based Alignment of Low Resolution MALDI-ToF Spectra.
Proceedings of the Man-Machine Interactions 3, 2013

2012
Gaussian mixture decomposition in the analysis of MALDI-TOF spectra.
Expert Syst. J. Knowl. Eng., 2012

2011
Efficient Algorithm for Microarray Probes Re-annotation.
Proceedings of the Computational Collective Intelligence. Technologies and Applications, 2011

2010
Distant Analysis of the GENEPI-ENTB Databank - System Overview.
Proceedings of the Computer Networks - 17th Conference, 2010

2009
Simulation of the Usage of Gaussian Mixture Models for the Purpose of Modelling Virtual Mass Spectrometry Data.
Proceedings of the Medical Informatics in a United and Healthy Europe - Proceedings of MIE 2009, The XXIInd International Congress of the European Federation for Medical Informatics, Sarajevo, Bosnia and Herzegovina, August 30, 2009

Analyze of Maldi-TOF Proteomic Spectra with Usage of Mixture of Gaussian Distributions.
Proceedings of the Man-Machine Interactions, 2009

2004
Estimating Regions of Absolute Stability with the Use of Piecewise Linear Lyapunov Functions.
Eur. J. Control, 2004


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