Joakim Lundeberg

According to our database, Joakim Lundeberg authored at least 10 papers between 2010 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

<i>Semla:</i> a versatile toolkit for spatially resolved transcriptomics analysis and visualization.

Ludvig Larsson, Lovisa Franzén, Patrik L. Ståhl, Joakim Lundeberg

Bioinform., October, 2023

Learning Stationary Markov Processes with Contrastive Adjustment.

Ludvig Bergenstråhle, Jens Lagergren, Joakim Lundeberg

CoRR, 2023

2021

sepal: identifying transcript profiles with spatial patterns by diffusion-based modeling.

Alma Andersson, Joakim Lundeberg

Bioinform., 2021

2020

SpatialCPie: an R/Bioconductor package for spatial transcriptomics cluster evaluation.

Joseph Bergenstråhle, Ludvig Bergenstråhle, Joakim Lundeberg

BMC Bioinform., 2020

2019

ST viewer: a tool for analysis and visualization of spatial transcriptomics datasets.

José Fernández Navarro, Joakim Lundeberg, Patrik L. Ståhl

Bioinform., 2019

2018

ST Spot Detector: a web-based application for automatic spot and tissue detection for spatial Transcriptomics image datasets.

Kim Wong, José Fernández Navarro, Ludvig Bergenstråhle, Patrik L. Ståhl, Joakim Lundeberg

Bioinform., 2018

2017

ST Pipeline: an automated pipeline for spatial mapping of unique transcripts.

José Fernández Navarro, Joel Sjöstrand, Fredrik Salmén, Joakim Lundeberg, Patrik L. Ståhl

Bioinform., 2017

2014

BESST - Efficient scaffolding of large fragmented assemblies.

Kristoffer Sahlin, Francesco Vezzi, Björn Nystedt, Joakim Lundeberg, Lars Arvestad

BMC Bioinform., 2014

2012

Improved gap size estimation for scaffolding algorithms.

Kristoffer Sahlin, Nathaniel Street, Joakim Lundeberg, Lars Arvestad

Bioinform., 2012

2010

Classification of DNA sequences using Bloom filters.

Henrik Stranneheim, Max Käller, Tobias Allander, Björn Andersson, Lars Arvestad, Joakim Lundeberg

Bioinform., 2010