Jing Huang

Orcid: 0000-0001-9639-2907

Affiliations:
  • Westlake Institute for Advanced Study, Institute for Biology, Hangzhou, China
  • University of Maryland, School of Pharmacy, Baltimore, USA (former)
  • National Institutes of Health, Bethesda, USA (former)


According to our database1, Jing Huang authored at least 15 papers between 2013 and 2024.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Can Protein Structure Prediction Methods Capture Alternative Conformations of Membrane Transporters?
J. Chem. Inf. Model., 2024

Alchemical Transformations and Beyond: Recent Advances and Real-World Applications of Free Energy Calculations in Drug Discovery.
J. Chem. Inf. Model., 2024

2023
A Simple Way to Incorporate Target Structural Information in Molecular Generative Models.
J. Chem. Inf. Model., June, 2023

Constant advance replicas method for locating minimum energy paths and transition states.
J. Comput. Chem., 2023

OpenMM 8: Molecular Dynamics Simulation with Machine Learning Potentials.
CoRR, 2023

2022
EViS: An Enhanced Virtual Screening Approach Based on Pocket-Ligand Similarity.
J. Chem. Inf. Model., 2022

CHARMM-GUI Drude prepper for molecular dynamics simulation using the classical Drude polarizable force field.
J. Comput. Chem., 2022

2020
Predicting partition coefficients of drug-like molecules in the SAMPL6 challenge with Drude polarizable force fields.
J. Comput. Aided Mol. Des., 2020

2018
Molecular dynamics simulations using the drude polarizable force field on GPUs with OpenMM: Implementation, validation, and benchmarks.
J. Comput. Chem., 2018

An explicit-solvent hybrid QM and MM approach for predicting pKa of small molecules in SAMPL6 challenge.
J. Comput. Aided Mol. Des., 2018

2017
Absolute binding free energies for octa-acids and guests in SAMPL5 - Evaluating binding free energies for octa-acid and guest complexes in the SAMPL5 blind challenge.
J. Comput. Aided Mol. Des., 2017

Absolute binding free energy calculations of CBClip host-guest systems in the SAMPL5 blind challenge.
J. Comput. Aided Mol. Des., 2017

2016
DIRECT-ID: An automated method to identify and quantify conformational variations - application to β<sub>2</sub>-adrenergic GPCR.
J. Comput. Chem., 2016

Calculating distribution coefficients based on multi-scale free energy simulations: an evaluation of MM and QM/MM explicit solvent simulations of water-cyclohexane transfer in the SAMPL5 challenge.
J. Comput. Aided Mol. Des., 2016

2013
CHARMM36 all-atom additive protein force field: Validation based on comparison to NMR data.
J. Comput. Chem., 2013


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