Jimin Pei

According to our database, Jimin Pei authored at least 18 papers between 2001 and 2023.

Collaborative distances:

• Dijkstra number of six.
• Erdős number of four.

2023

AFTM: a database of transmembrane regions in the human proteome predicted by AlphaFold.

Jimin Pei, Qian Cong

Database J. Biol. Databases Curation, 2023

2022

Human mitochondrial protein complexes revealed by large-scale coevolution analysis and deep learning-based structure modeling.

Jimin Pei, Jing Zhang, Qian Cong

Bioinform., 2022

DisEnrich: database of enriched regions in human dark proteome.

Kirill E. Medvedev, Jimin Pei, Nick V. Grishin

Bioinform., 2022

2020

Mutation severity spectrum of rare alleles in the human genome is predictive of disease type.

Jimin Pei, Lisa N. Kinch, Zbyszek Otwinowski, Nick V. Grishin

PLoS Comput. Biol., 2020

pCRM1exportome: database of predicted CRM1-dependent Nuclear Export Signal (NES) motifs in cancer-related genes.

Yoonji Lee, Jordan M. Baumhardt, Jimin Pei, Yuh Min Chook, Nick V. Grishin

Bioinform., 2020

2018

A sequence family database built on ECOD structural domains.

Yuxing Liao, R. Dustin Schaeffer, Jimin Pei, Nick V. Grishin

Bioinform., 2018

2015

SFESA: a web server for pairwise alignment refinement by secondary structure shifts.

Jing Tong, Jimin Pei, Nick V. Grishin

BMC Bioinform., 2015

LocNES: a computational tool for locating classical NESs in CRM1 cargo proteins.

Darui Xu, Kara Marquis, Jimin Pei, Szu-Chin Fu, Tolga Cagatay, Nick V. Grishin, Yuh Min Chook

Bioinform., 2015

2014

ECOD: An Evolutionary Classification of Protein Domains.

Hua Cheng, R. Dustin Schaeffer, Yuxing Liao, Lisa N. Kinch, Jimin Pei, Shuoyong Shi, Bong-Hyun Kim, Nick V. Grishin

PLoS Comput. Biol., 2014

2013

Defining and predicting structurally conserved regions in protein superfamilies.

Ivan K. Huang, Jimin Pei, Nick V. Grishin

Bioinform., 2013

2011

An automatic method for CASP9 free modeling structure prediction assessment.

Qian Cong, Lisa N. Kinch, Jimin Pei, Shuoyong Shi, Vyacheslav N. Grishin, Wenlin Li, Nick V. Grishin

Bioinform., 2011

2009

Analysis of CASP8 targets, predictions and assessment methods.

Shuoyong Shi, Jimin Pei, Ruslan Sadreyev, Lisa N. Kinch, Indraneel Majumdar, Jing Tong, Hua Cheng, Bong-Hyun Kim, Nick V. Grishin

Database J. Biol. Databases Curation, 2009

2008

PROMALS3D web server for accurate multiple protein sequence and structure alignments.

Jimin Pei, Ming Tang, Nick V. Grishin

Nucleic Acids Res., 2008

2007

PROMALS web server for accurate multiple protein sequence alignments.

Jimin Pei, Bong-Hyun Kim, Ming Tang, Nick V. Grishin

Nucleic Acids Res., 2007

PROMALS: towards accurate multiple sequence alignments of distantly related proteins.

Jimin Pei, Nick V. Grishin

Bioinform., 2007

2006

Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.

Jimin Pei, Wei Cai, Lisa N. Kinch, Nick V. Grishin

Bioinform., 2006

2003

PCMA: fast and accurate multiple sequence alignment based on profile consistency.

Jimin Pei, Ruslan Sadreyev, Nick V. Grishin

Bioinform., 2003

2001

AL2CO: calculation of positional conservation in a protein sequence alignment.

Jimin Pei, Nick V. Grishin

Bioinform., 2001