Jianning Li

According to our database, Jianning Li authored at least 56 papers between 2019 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Back to the Roots: Reconstructing Large and Complex Cranial Defects using an Image-based Statistical Shape Model.

Jianning Li, David G. Ellis, Antonio Pepe, Christina Gsaxner, Michele R. Aizenberg, Jens Kleesiek, Jan Egger

J. Medical Syst., December, 2024

CytoNuke Dataset: Towards reliable whole-cell segmentation in bright-field histological images.

Johannes Raufeisen, Kunpeng Xie, Fabian Hörst, Till Braunschweig, Jianning Li, Jens Kleesiek, Rainer Röhrig, Jan Egger, Bastian Leibe, Frank Hölzle, Alexander Hermans, Behrus Puladi

Dataset, January, 2024

Corrigendum to: GAN-based generation of realistic 3D volumetric data: A systematic review and taxonomy [Medical Image Analysis 93 (2024)].

André Ferreira, Jianning Li, Kelsey L. Pomykala, Jens Kleesiek, Victor Alves, Jan Egger

Medical Image Anal., 2024

GAN-based generation of realistic 3D volumetric data: A systematic review and taxonomy.

André Ferreira, Jianning Li, Kelsey L. Pomykala, Jens Kleesiek, Victor Alves, Jan Egger

Medical Image Anal., 2024

A Semi-automatic Cranial Implant Design Tool Based on Rigid ICP Template Alignment and Voxel Space Reconstruction.

Michael Lackner, Behrus Puladi, Jens Kleesiek, Jan Egger, Jianning Li

CoRR, 2024

Deep Medial Voxels: Learned Medial Axis Approximations for Anatomical Shape Modeling.

Antonio Pepe, Richard Schussnig, Jianning Li, Christina Gsaxner, Dieter Schmalstieg, Jan Egger

CoRR, 2024

How we won BraTS 2023 Adult Glioma challenge? Just faking it! Enhanced Synthetic Data Augmentation and Model Ensemble for brain tumour segmentation.

André Ferreira, Naida Solak, Jianning Li, Philipp Dammann, Jens Kleesiek, Victor Alves, Jan Egger

CoRR, 2024

Cyto R-CNN and CytoNuke Dataset: Towards reliable whole-cell segmentation in bright-field histological images.

Johannes Raufeisen, Kunpeng Xie, Fabian Hörst, Till Braunschweig, Jianning Li, Jens Kleesiek, Rainer Röhrig, Jan Egger, Bastian Leibe, Frank Hölzle, Alexander Hermans, Behrus Puladi

Comput. Methods Programs Biomed., 2024

ChatGPT in healthcare: A taxonomy and systematic review.

Jianning Li, Amin Dada, Behrus Puladi, Jens Kleesiek, Jan Egger

Comput. Methods Programs Biomed., 2024

2023

Automated cross-sectional view selection in CT angiography of aortic dissections with uncertainty awareness and retrospective clinical annotations.

Antonio Pepe, Jan Egger, Marina Codari, Martin J. Willemink, Christina Gsaxner, Jianning Li, Peter M. Roth, Dieter Schmalstieg, Gabriel Mistelbauer, Dominik Fleischmann

Comput. Biol. Medicine, October, 2023

3D-COSI ~ 3D Collection of Surgical Instruments.

Gijs Luijten, Christina Gsaxner, Jianning Li, Antonio Pepe, Narmada Ambigapathy, Moon Kim, Xiaojun Chen, Jens Kleesiek, Frank Hölzle, Behrus Puladi, Jan Egger

Dataset, October, 2023

3D-COSI ~ 3D Collection of Surgical Instruments.

Gijs Luijten, Christina Gsaxner, Jianning Li, Antonio Pepe, Narmada Ambigapathy, Moon Kim, Xiaojun Chen, Jens Kleesiek, Frank Hölzle, Behrus Puladi, Jan Egger

Dataset, October, 2023

Towards clinical applicability and computational efficiency in automatic cranial implant design: An overview of the AutoImplant 2021 cranial implant design challenge.

Jianning Li, David G. Ellis, Oldrich Kodym, Laurèl Rauschenbach, Christoph Rieß, Ulrich Sure, Karsten H. Wrede, Carlos M. Alvarez, Marek Wodzinski, Mateusz Daniol, Daria Hemmerling, Hamza Mahdi, Allison Clement, Evan Kim, Zachary Fishman, Cari M. Whyne, James G. Mainprize, Michael R. Hardisty, Shashwat Pathak, Chitimireddy Sindhura, Rama Krishna Sai S. Gorthi, Degala Venkata Kiran, Subrahmanyam Gorthi, Bokai Yang, Ke Fang, Xingyu Li, Artem Kroviakov, Lei Yu, Yuan Jin, Antonio Pepe, Christina Gsaxner, Adam Herout, Victor Alves, Michal Spanel, Michele R. Aizenberg, Jens Kleesiek, Jan Egger

Medical Image Anal., August, 2023

Open-source skull reconstruction with MONAI.

Jianning Li, André Ferreira, Behrus Puladi, Victor Alves, Michael Kamp, Moon S. Kim, Felix Nensa, Jens Kleesiek, Seyed-Ahmad Ahmadi, Jan Egger

SoftwareX, July, 2023

The HoloLens in medicine: A systematic review and taxonomy.

Christina Gsaxner, Jianning Li, Antonio Pepe, Yuan Jin, Jens Kleesiek, Dieter Schmalstieg, Jan Egger

Medical Image Anal., April, 2023

On the Impact of Cross-Domain Data on German Language Models.

Amin Dada, Aokun Chen, Cheng Peng, Kaleb E. Smith, Ahmad Idrissi-Yaghir, Constantin Marc Seibold, Jianning Li, Lars Heiliger, Xi Yang, Christoph M. Friedrich, Daniel Truhn, Jan Egger, Jiang Bian, Jens Kleesiek, Yonghui Wu

CoRR, 2023

MedShapeNet - A Large-Scale Dataset of 3D Medical Shapes for Computer Vision.

Jianning Li, Antonio Pepe, Christina Gsaxner, Gijs Luijten, Yuan Jin, Narmada Ambigapathy, Enrico Nasca, Naida Solak, Gian Marco Melito, Afaque R. Memon, Xiaojun Chen, Jan Stefan Kirschke, Ezequiel de la Rosa, Patrick Ferdinand Christ, Hongwei Bran Li, David G. Ellis, Michele R. Aizenberg, Sergios Gatidis, Thomas Küstner, Nadya Shusharina, Nicholas Heller, Vincent Andrearczyk, Adrien Depeursinge, Mathieu Hatt, Anjany Sekuboyina, Maximilian Löffler, Hans Liebl, Reuben Dorent, Tom Vercauteren, Jonathan Shapey, Aaron Kujawa, Stefan Cornelissen, Patrick Langenhuizen, Achraf Ben-Hamadou, Ahmed Rekik, Sergi Pujades, Edmond Boyer, Federico Bolelli, Costantino Grana, Luca Lumetti, Hamidreza Salehi, Jun Ma, Yao Zhang, Ramtin Gharleghi, Susann Beier, Arcot Sowmya, Eduardo A. Garza-Villarreal, Thania Balducci, et al.

CoRR, 2023

Why is the winner the best?

Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Sharib Ali, Vincent Andrearczyk, Marc Aubreville, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Veronika Cheplygina, Marie Daum, Marleen de Bruijne, Adrien Depeursinge, Reuben Dorent, Jan Egger, David G. Ellis, Sandy Engelhardt, Melanie Ganz, Noha M. Ghatwary, Gabriel Girard, Patrick Godau, Anubha Gupta, Lasse Hansen, Kanako Harada, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Pierre Jannin, Ali Emre Kavur, Oldrich Kodym, Michal Kozubek, Jianning Li, Hongwei Bran Li, Jun Ma, Carlos Martín-Isla, Bjoern H. Menze, J. Alison Noble, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Tim Rädsch, et al.

CoRR, 2023

FAM: Relative Flatness Aware Minimization.

Linara Adilova, Amr Abourayya, Jianning Li, Amin Dada, Henning Petzka, Jan Egger, Jens Kleesiek, Michael Kamp

Proceedings of the Topological, 2023

Anatomy Completor: A Multi-class Completion Framework for 3D Anatomy Reconstruction.

Jianning Li, Antonio Pepe, Gijs Luijten, Christina Schwarz-Gsaxner, Jens Kleesiek, Jan Egger

Proceedings of the Shape in Medical Imaging - International Workshop, 2023

Enhanced Data Augmentation Using Synthetic Data for Brain Tumour Segmentation.

André Ferreira, Naida Solak, Jianning Li, Philipp Dammann, Jens Kleesiek, Victor Alves, Jan Egger

Proceedings of the Brain Tumor Segmentation, and Cross-Modality Domain Adaptation for Medical Image Segmentation, 2023

Multicenter aortic vessel tree extraction using deep learning.

Bernhard Scharinger, Antonio Pepe, Yuan Jin, Christina Gsaxner, Jianning Li, Jan Egger

Proceedings of the Medical Imaging 2023: Biomedical Applications in Molecular, 2023

On the Impact of Cross-Domain Data on German Language Models.

Amin Dada, Aokun Chen, Cheng Peng, Kaleb E. Smith, Ahmad Idrissi-Yaghir, Constantin Seibold, Jianning Li, Lars Heiliger, Christoph M. Friedrich, Daniel Truhn, Jan Egger, Jiang Bian, Jens Kleesiek, Yonghui Wu

Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2023, 2023

Why is the Winner the Best?

Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Sharib Ali, Vincent Andrearczyk, Marc Aubreville, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Veronika Cheplygina, Marie Daum, Marleen de Bruijne, Adrien Depeursinge, Reuben Dorent, Jan Egger, David G. Ellis, Sandy Engelhardt, Melanie Ganz, Noha M. Ghatwary, Gabriel Girard, Patrick Godau, Anubha Gupta, Lasse Hansen, Kanako Harada, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Pierre Jannin, A. Emre Kavur, Oldrich Kodym, Michal Kozubek, Jianning Li, Hongwei Bran Li, Jun Ma, Carlos Martín-Isla, Bjoern H. Menze, J. Alison Noble, Valentin Oreiller, Nicolas Padoy, Sarthak Pati, Kelly Payette, Tim Rädsch, Jonathan Rafael-Patino, Vivek Singh Bawa, Stefanie Speidel, Carole H. Sudre, Kimberlin M. H. van Wijnen, Martin Wagner, D. Wei, Amine Yamlahi, Moi Hoon Yap, C. Yuan, Maximilian Zenk, A. Zia, David Zimmerer, Dogu Baran Aydogan, Binod Bhattarai, Louise Bloch, Raphael Brüngel, J. Cho, C. Choi, Q. Dou, Ivan Ezhov, Christoph M. Friedrich, C. Fuller, Rebati Raman Gaire, Adrian Galdran, Álvaro García-Faura, Maria Grammatikopoulou, S. Hong, Mostafa Jahanifar, I. Jang, Abdolrahim Kadkhodamohammadi, I. Kang, Florian Kofler, S. Kondo, Hugo Jaco Kuijf, M. Li, M. Luu, Tomaz Martincic, Pedro Morais, Mohamed A. Naser, Bruno Oliveira, David Owen, S. Pang, J. Park, S. Park, Szymon Plotka, Élodie Puybareau, Nasir M. Rajpoot, K. Ryu, Numan Saeed, Adam Shephard, Pengcheng Shi, Dejan Stepec, Ronast Subedi, Guillaume Tochon, Helena R. Torres, Hélène Urien, João L. Vilaça, Kareem A. Wahid, H. Wang, J. Wang, L. Wang, X. Wang, Benedikt Wiestler, Marek Wodzinski, F. Xia, J. Xie, Z. Xiong, Sen Yang, Y. Yang, Z. Zhao, Klaus H. Maier-Hein, Paul F. Jäger, Annette Kopp-Schneider, Lena Maier-Hein

Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

2022

Studierfenster: an Open Science Cloud-Based Medical Imaging Analysis Platform.

Jan Egger, Daniel Wild, Maximilian Weber, Christopher A. Ramirez Bedoya, Florian Karner, Alexander Prutsch, Michael Schmied, Christina Dionysio, Dominik Krobath, Yuan Jin, Christina Gsaxner, Jianning Li, Antonio Pepe

J. Digit. Imaging, 2022

Biomedical image analysis competitions: The state of current participation practice.

Matthias Eisenmann, Annika Reinke, Vivienn Weru, Minu Dietlinde Tizabi, Fabian Isensee, Tim J. Adler, Patrick Godau, Veronika Cheplygina, Michal Kozubek, Sharib Ali, Anubha Gupta, Jan Kybic, J. Alison Noble, Carlos Ortiz-de-Solórzano, Samiksha Pachade, Caroline Petitjean, Daniel Sage, Donglai Wei, Elizabeth Wilden, Deepak Alapatt, Vincent Andrearczyk, Ujjwal Baid, Spyridon Bakas, Niranjan Balu, Sophia Bano, Vivek Singh Bawa, Jorge Bernal, Sebastian Bodenstedt, Alessandro Casella, Jinwook Choi, Olivier Commowick, Marie Daum, Adrien Depeursinge, Reuben Dorent, Jan Egger, Hannah Eichhorn, Sandy Engelhardt, Melanie Ganz, Gabriel Girard, Lasse Hansen, Mattias P. Heinrich, Nicholas Heller, Alessa Hering, Arnaud Huaulmé, Hyunjeong Kim, Bennett A. Landman, Hongwei Bran Li, Jianning Li, Jun Ma, Anne L. Martel, et al.

CoRR, 2022

GAN-based generation of realistic 3D data: A systematic review and taxonomy.

André Ferreira, Jianning Li, Kelsey L. Pomykala, Jens Kleesiek, Victor Alves, Jan Egger

CoRR, 2022

Medical deep learning - A systematic meta-review.

Jan Egger, Christina Gsaxner, Antonio Pepe, Kelsey L. Pomykala, Frederic Jonske, Manuel Kurz, Jianning Li, Jens Kleesiek

Comput. Methods Programs Biomed., 2022

Training β-VAE by Aggregating a Learned Gaussian Posterior with a Decoupled Decoder.

Jianning Li, Jana Fragemann, Seyed-Ahmad Ahmadi, Jens Kleesiek, Jan Egger

Proceedings of the Medical Applications with Disentanglements - First MICCAI Workshop, 2022

Applying Disentanglement in the Medical Domain: An Introduction for the MAD Workshop.

Jana Fragemann, Xiao Liu, Jianning Li, Sotirios A. Tsaftaris, Jan Egger, Jens Kleesiek

Proceedings of the Medical Applications with Disentanglements - First MICCAI Workshop, 2022

Enhancement of aortic dissections in CT angiography: are common filters robust enough?

Antonella Disanto, Antonio Pepe, Luana Petrelli, Christina Gsaxner, Jianning Li, Yuan Jin, Antonio Brunetti, Domenico Buongiorno, Jan Egger, Vitoantonio Bevilacqua

Proceedings of the Medical Imaging 2022: Biomedical Applications in Molecular, 2022

CranGAN: Adversarial Point Cloud Reconstruction for patient-specific Cranial Implant Design.

Harsh Sulakhe, Jianning Li, Jan Egger, Poonam Goyal

Proceedings of the 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2022

2021

AutoImplant 2020-First MICCAI Challenge on Automatic Cranial Implant Design.

Jianning Li, Pedro Pimentel, Angelika Szengel, Moritz Ehlke, Hans Lamecker, Stefan Zachow, Laura Jovani Estacio Cerquin, Christian Doenitz, Heiko Ramm, Haochen Shi, Xiaojun Chen, Franco Matzkin, Virginia F. J. Newcombe, Enzo Ferrante, Yuan Jin, David G. Ellis, Michele R. Aizenberg, Oldrich Kodym, Michal Spanel, Adam Herout, James G. Mainprize, Zachary Fishman, Michael R. Hardisty, Amirhossein Bayat, Suprosanna Shit, Bomin Wang, Zhi Liu, Matthias Eder, Antonio Pepe, Christina Gsaxner, Victor Alves, Ulrike Zefferer, Gord von Campe, Karin Pistracher, Ute Schäfer, Dieter Schmalstieg, Bjoern H. Menze, Ben Glocker, Jan Egger

IEEE Trans. Medical Imaging, 2021

Deep learning - a first meta-survey of selected reviews across scientific disciplines, their commonalities, challenges and research impact.

Jan Egger, Antonio Pepe, Christina Gsaxner, Yuan Jin, Jianning Li, Roman Kern

PeerJ Comput. Sci., 2021

Automatic skull defect restoration and cranial implant generation for cranioplasty.

Jianning Li, Gord von Campe, Antonio Pepe, Christina Gsaxner, Enpeng Wang, Xiaojun Chen, Ulrike Zefferer, Martin Tödtling, Marcell Krall, Hannes Deutschmann, Ute Schäfer, Dieter Schmalstieg, Jan Egger

Medical Image Anal., 2021

AI-based Aortic Vessel Tree Segmentation for Cardiovascular Diseases Treatment: Status Quo.

Yuan Jin, Antonio Pepe, Jianning Li, Christina Gsaxner, Fen-hua Zhao, Jens Kleesiek, Alejandro F. Frangi, Jan Egger

CoRR, 2021

Augmented Reality for Head and Neck Carcinoma Imaging: Description and Feasibility of an Instant Calibration, Markerless Approach.

Christina Gsaxner, Antonio Pepe, Jianning Li, Una Ibrahimpasic, Jürgen Wallner, Dieter Schmalstieg, Jan Egger

Comput. Methods Programs Biomed., 2021

Inside-Out Instrument Tracking for Surgical Navigation in Augmented Reality.

Christina Gsaxner, Jianning Li, Antonio Pepe, Dieter Schmalstieg, Jan Egger

Proceedings of the VRST '21: 27th ACM Symposium on Virtual Reality Software and Technology, Virtual Event / Osaka, Japan, December 8, 2021

An online platform for automatic skull defect restoration and cranial implant design.

Jianning Li, Antonio Pepe, Christina Gsaxner, Jan Egger

Proceedings of the Medical Imaging 2021: Image-Guided Procedures, 2021

PCA-Skull: 3D Skull Shape Modelling Using Principal Component Analysis.

Lei Yu, Jianning Li, Jan Egger

Proceedings of the Towards the Automatization of Cranial Implant Design in Cranioplasty II, 2021

Learning to Rearrange Voxels in Binary Segmentation Masks for Smooth Manifold Triangulation.

Jianning Li, Antonio Pepe, Christina Gsaxner, Yuan Jin, Jan Egger

Proceedings of the Towards the Automatization of Cranial Implant Design in Cranioplasty II, 2021

Sparse Convolutional Neural Network for Skull Reconstruction.

Artem Kroviakov, Jianning Li, Jan Egger

Proceedings of the Towards the Automatization of Cranial Implant Design in Cranioplasty II, 2021

Deep learning and particle filter-based aortic dissection vessel tree segmentation.

Yuan Jin, Antonio Pepe, Jianning Li, Christina Gsaxner, Jan Egger

Proceedings of the Medical Imaging 2021: Biomedical Applications in Molecular, 2021

2020

Detection, segmentation, simulation and visualization of aortic dissections: A review.

Antonio Pepe, Jianning Li, Malte Rolf-Pissarczyk, Christina Gsaxner, Xiaojun Chen, Gerhard A. Holzapfel, Jan Egger

Medical Image Anal., 2020

Deep Learning - A first Meta-Survey of selected Reviews across Scientific Disciplines and their Research Impact.

Jan Egger, Antonio Pepe, Christina Gsaxner, Jianning Li

CoRR, 2020

Medical Deep Learning - A systematic Meta-Review.

Jan Egger, Christina Gsaxner, Antonio Pepe, Jianning Li

CoRR, 2020

A comprehensive workflow and framework for immersive virtual endoscopy of dissected aortae from CTA data.

Jan Egger, Simon Gunacker, Antonio Pepe, Gian Marco Melito, Christina Gsaxner, Jianning Li, Katrin Ellermann, Xiaojun Chen

Proceedings of the Medical Imaging 2020: Image-Guided Procedures, 2020

Semi-supervised Virtual Regression of Aortic Dissections Using 3D Generative Inpainting.

Antonio Pepe, Gabriel Mistelbauer, Christina Gsaxner, Jianning Li, Dominik Fleischmann, Dieter Schmalstieg, Jan Egger

Proceedings of the Thoracic Image Analysis - Second International Workshop, 2020

A Baseline Approach for AutoImplant: The MICCAI 2020 Cranial Implant Design Challenge.

Jianning Li, Antonio Pepe, Christina Gsaxner, Gord von Campe, Jan Egger

Proceedings of the Multimodal Learning for Clinical Decision Support and Clinical Image-Based Procedures, 2020

Dataset Descriptor for the AutoImplant Cranial Implant Design Challenge.

Jianning Li, Jan Egger

Proceedings of the Towards the Automatization of Cranial Implant Design in Cranioplasty, 2020

Single-Shot Deep Volumetric Regression for Mobile Medical Augmented Reality.

Florian Karner, Christina Gsaxner, Antonio Pepe, Jianning Li, Philipp Fleck, Clemens Arth, Jürgen Wallner, Jan Egger

Proceedings of the Multimodal Learning for Clinical Decision Support and Clinical Image-Based Procedures, 2020

High-Resolution Cranial Implant Prediction via Patch-Wise Training.

Yuan Jin, Jianning Li, Jan Egger

Proceedings of the Towards the Automatization of Cranial Implant Design in Cranioplasty, 2020

Learning Volumetric Shape Super-Resolution for Cranial Implant Design.

Matthias Eder, Jianning Li, Jan Egger

Proceedings of the Towards the Automatization of Cranial Implant Design in Cranioplasty, 2020

IRIS: interactive real-time feedback image segmentation with deep learning.

Antonio Pepe, Richard Schussnig, Jianning Li, Christina Gsaxner, Xiaojun Chen, Thomas-Peter Fries, Jan Egger

Proceedings of the Medical Imaging 2020: Biomedical Applications in Molecular, 2020

2019

Structural Analysis of Complex Atrial Intramural Microstructure from A Multi-layer Model Based on Siamese Network.

Jianning Li, Riqing Chen, Jian Wu

Proceedings of the 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2019

A Robust Algorithm for Selecting Optimal Regularization Parameter Based on Bilateral Accumulative Area.

Riqing Chen, Jianning Li, Jian Wu

Proceedings of the 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2019