Jianfu Li

According to our database, Jianfu Li authored at least 51 papers between 2009 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Mapping vaccine names in clinical trials to vaccine ontology using cascaded fine-tuned domain-specific language models.

Jianfu Li, Yiming Li, Yuanyi Pan, Jinjing Guo, Zenan Sun, Fang Li, Yongqun He, Cui Tao

J. Biomed. Semant., December, 2024

Prompt Tuning in Biomedical Relation Extraction.

Jianping He, Fang Li, Jianfu Li, Xinyue Hu, Yi Nian, Yang Xiang, Jingqi Wang, Qiang Wei, Yiming Li, Hua Xu, Cui Tao

J. Heal. Informatics Res., June, 2024

Improving tabular data extraction in scanned laboratory reports using deep learning models.

Yiming Li, Qiang Wei, Xinghan Chen, Jianfu Li, Cui Tao, Hua Xu

J. Biomed. Informatics, 2024

RefAI: a GPT-powered retrieval-augmented generative tool for biomedical literature recommendation and summarization.

Yiming Li, Jeff Zhao, Manqi Li, Yifang Dang, Evan Yu, Jianfu Li, Zenan Sun, Usama Hussein, Jianguo Wen, Ahmed M. Abdelhameed, Junhua Mai, Shenduo Li, Yue Yu, Xinyue Hu, Daowei Yang, Jingna Feng, Zehan Li, Jianping He, Wei Tao, Tiehang Duan, Yanyan Lou, Fang Li, Cui Tao

J. Am. Medical Informatics Assoc., 2024

Ensemble pretrained language models to extract biomedical knowledge from literature.

Zhao Li, Qiang Wei, Liang-Chin Huang, Jianfu Li, Yan Hu, Yao-Shun Chuang, Jianping He, Avisha Das, Vipina Kuttichi Keloth, Yuntao Yang, Chiamaka S. Diala, Kirk E. Roberts, Cui Tao, Xiaoqian Jiang, W. Jim Zheng, Hua Xu

J. Am. Medical Informatics Assoc., 2024

Relation extraction using large language models: a case study on acupuncture point locations.

Yiming Li, Xueqing Peng, Jianfu Li, Xu Zuo, Suyuan Peng, Donghong Pei, Cui Tao, Hua Xu, Na Hong

J. Am. Medical Informatics Assoc., 2024

Improving Entity Recognition Using Ensembles of Deep Learning and Fine-tuned Large Language Models: A Case Study on Adverse Event Extraction from Multiple Sources.

Yiming Li, Deepthi Viswaroopan, William He, Jianfu Li, Xu Zuo, Hua Xu, Cui Tao

CoRR, 2024

A Mixed Hypergraph Convolutional Network for Session-Based Recommendation.

Jianfu Li, Dan Zhang, Sihua Gao, Weifeng Xu

Proceedings of the Advanced Intelligent Computing Technology and Applications, 2024

2023

"Listen to your heart": A novel interoceptive strategy for real-time fMRI neurofeedback training of anterior insula activity.

Yuan Zhang, Qiong Zhang, Jiayuan Wang, Menghan Zhou, Yanan Qing, Haochen Zou, Jianfu Li, Chenghui Yang, Benjamin Becker, Keith M. Kendrick, Shuxia Yao

NeuroImage, December, 2023

AE-GPT: Using Large Language Models to Extract Adverse Events from Surveillance Reports-A Use Case with Influenza Vaccine Adverse Events.

Yiming Li, Jianfu Li, Jianping He, Cui Tao

CoRR, 2023

Zero-shot Clinical Entity Recognition using ChatGPT.

Yan Hu, Iqra Ameer, Xu Zuo, Xueqing Peng, Yujia Zhou, Zehan Li, Yiming Li, Jianfu Li, Xiaoqian Jiang, Hua Xu

CoRR, 2023

Extracting Drug-Protein Relation from Literature Using Ensembles of Biomedical Transformers.

Avisha Das, Zhao Li, Qiang Wei, Jianfu Li, Liang-Chin Huang, Yan Hu, Rongbin Li, Wenjin Jim Zheng, Hua Xu

Proceedings of the MEDINFO 2023 - The Future Is Accessible, 2023

POI Recommendation Based on Double-Level Spatio-Temporal Relationship in Locations and Categories.

Jianfu Li, Xu Li

Proceedings of the Neural Information Processing - 30th International Conference, 2023

Development of a Natural Language Processing Tool to Extract Acupuncture Point Location Terms.

Yiming Li, Xueqing Peng, Jianfu Li, Suyuan Peng, Donghong Pei, Cui Tao, Hua Xu, Na Hong

Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

2022

DRT: A new toolbox for the Standard EEG Data Structure in large-scale EEG applications.

Li Dong, Yufan Zhang, Lingling Zhao, Ting Zheng, Weidong Wang, Jianfu Li, Diankun Gong, Tiejun Liu, Dezhong Yao

SoftwareX, 2022

A comparative study of pre-trained language models for named entity recognition in clinical trial eligibility criteria from multiple corpora.

Jianfu Li, Qiang Wei, Omid Ghiasvand, Miao Chen, Victor S. Lobanov, Chunhua Weng, Hua Xu

BMC Medical Informatics Decis. Mak., 2022

IMI-CDE: an interactive interface for collaborative mapping of study variables to common data elements.

Shiqiang Tao, Wei-Chun Chou, Jianfu Li, Jingcheng Du, Pritham Ram, Rashmie Abeysinghe, Hua Xu, Xiaoqian Jiang, Peter W. Rose, Lucila Ohno-Machado, Guo-Qiang Zhang

Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Chemical-Protein Relation Extraction with Pre-trained Prompt Tuning.

Jianping He, Fang Li, Xinyue Hu, Jianfu Li, Yi Nian, Jingqi Wang, Yang Xiang, Qiang Wei, Hua Xu, Cui Tao

Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

Conversational Bots for Psychotherapy: A Study of Generative Transformer Models Using Domain-specific Dialogues.

Avisha Das, Salih Selek, Alia R. Warner, Xu Zuo, Yan Hu, Vipina Kuttichi Keloth, Jianfu Li, W. Jim Zheng, Hua Xu

Proceedings of the 21st Workshop on Biomedical Language Processing, 2022

Extracting Cancer Chemotherapy and Response Information from Clinical Notes following the RECIST Definition.

Xu Zuo, Natalie Gregoriou, Ashok Kumar, Jianfu Li, Jeremy Warner, Yang Ping, Hua Xu

Proceedings of the AMIA 2022, 2022

2021

WeBrain: A web-based brainformatics platform of computational ecosystem for EEG big data analysis.

Li Dong, Jianfu Li, Qiunan Zou, Yufan Zhang, Lingling Zhao, Xin Wen, Jinnan Gong, Fali Li, Tiejun Liu, Alan C. Evans, Pedro A. Valdés-Sosa, Dezhong Yao

NeuroImage, 2021

Are synthetic clinical notes useful for real natural language processing tasks: A case study on clinical entity recognition.

Jianfu Li, Yujia Zhou, Xiaoqian Jiang, Karthik Natarajan, Serguei V. S. Pakhomov, Hongfang Liu, Hua Xu

J. Am. Medical Informatics Assoc., 2021

Study of Pre-trained Language Models for Named Entity Recognition in Clinical Trial Eligibility Criteria from Multiple Corpora.

Jianfu Li, Qiang Wei, Omid Ghiasvand, Miao Chen, Victor S. Lobanov, Chunhua Weng, Hua Xu

Proceedings of the 9th IEEE International Conference on Healthcare Informatics, 2021

Robustly Pre-Trained Neural Model for Direct Temporal Relation Extraction.

Hong Guan, Jianfu Li, Hua Xu, Murthy V. Devarakonda

Proceedings of the 9th IEEE International Conference on Healthcare Informatics, 2021

A PSO Based Multi-view Hierarchical Clustering Method.

Zhongyu Zhou, Jianfu Li

Proceedings of the Human Centered Computing - 7th International Conference, 2021

2020

Context-guided fully convolutional networks for joint craniomaxillofacial bone segmentation and landmark digitization.

Jun Zhang, Mingxia Liu, Li Wang, Si Chen, Peng Yuan, Jianfu Li, Steve Guo-Fang Shen, Zhen Tang, Ken-Chung Chen, James J. Xia, Dinggang Shen

Medical Image Anal., 2020

COVID-19 TestNorm: A tool to normalize COVID-19 testing names to LOINC codes.

Xiao Dong, Jianfu Li, Ekin Soysal, Jiang Bian, Scott L. DuVall, Elizabeth Hanchrow, Hongfang Liu, Kristine E. Lynch, Michael E. Matheny, Karthik Natarajan, Lucila Ohno-Machado, Serguei Pakhomov, Ruth Madeleine Reeves, Amy M. Sitapati, Swapna Abhyankar, Theresa Cullen, Jami Deckard, Xiaoqian Jiang, Robert Murphy, Hua Xu

J. Am. Medical Informatics Assoc., 2020

Rhythmic Network Modulation to Thalamocortical Couplings in Epilepsy.

Yun Qin, Nan Zhang, Yan Chen, Xiaojun Zuo, Sisi Jiang, Xiaole Zhao, Li Dong, Jianfu Li, Tao Zhang, Dezhong Yao, Cheng Luo

Int. J. Neural Syst., 2020

Dynamic Temporospatial Patterns of Functional Connectivity and Alterations in Idiopathic Generalized Epilepsy.

Sisi Jiang, Haonan Pei, Yang Huang, Yan Chen, Linli Liu, Jianfu Li, Hui He, Dezhong Yao, Cheng Luo

Int. J. Neural Syst., 2020

An Interactive Game for Changing Youth Behavior Regarding E-cigarettes.

Angela Xu, Muhammad Amith, Jianfu Li, Lu Tang, Cui Tao

Proceedings of the HCI International 2020 - Posters - 22nd International Conference, 2020

Normalizing Clinical Document Titles to LOINC Document Ontology: an Initial Study.

Xu Zuo, Jianfu Li, Bo Zhao, Yujia Zhou, Xiao Dong, Jon D. Duke, Karthik Natarajan, George Hripcsak, Nigam Shah, Juan M. Banda, Ruth M. Reeves, Hua Xu

Proceedings of the AMIA 2020, 2020

Deep Learning Approach to Parse Eligibility Criteria in Dietary Supplements Clinical Trials Following OMOP Common Data Model.

Anusha Bompelli, Jianfu Li, Yiqi Xu, Nan Wang, Yanshan Wang, Terrence J. Adam, Zhe He, Rui Zhang

Proceedings of the AMIA 2020, 2020

2019

BOLD-fMRI reveals the association between renal oxygenation and functional connectivity in the aging brain.

Hechun Li, Weifang Cao, Xingxing Zhang, Bo Sun, Sisi Jiang, Jianfu Li, Chang Liu, Wenjie Yin, Yu Wu, Tiejun Liu, Dezhong Yao, Cheng Luo

NeuroImage, 2019

White-matter functional networks changes in patients with schizophrenia.

Yuchao Jiang, Cheng Luo, Xuan Li, Yingjia Li, Hang Yang, Jianfu Li, Xin Chang, Hechun Li, Huanghao Yang, Jijun Wang, Mingjun Duan, Dezhong Yao

NeuroImage, 2019

Fusing Canonical Coefficients for Frequency Recognition in SSVEP-Based BCI.

Tiejun Liu, Yangsong Zhang, Lu Wang, Jianfu Li, Peng Xu, Dezhong Yao

IEEE Access, 2019

2018

Quantum network dialogue protocol based on continuous-variable GHZ states.

Lihua Gong, Cheng Tian, Jianfu Li, Xiangfu Zou

Quantum Inf. Process., 2018

Neuroscience Information Toolbox: An Open Source Toolbox for EEG-fMRI Multimodal Fusion Analysis.

Li Dong, Cheng Luo, Xiaobo Liu, Sisi Jiang, Fali Li, Hongshuo Feng, Jianfu Li, Diankun Gong, Dezhong Yao

Frontiers Neuroinformatics, 2018

Calculating the Midsagittal Plane for Symmetrical Bilateral Shapes: Applications to Clinical Facial Surgical Planning.

Aarti Jajoo, Matthew Nicol, Jaime Gateno, Ken-Chung Chen, Zhen Tang, Tasadduk Chowdhury, Jianfu Li, Steve Guo-Fang Shen, James J. Xia

CoRR, 2018

2017

Reconstruction-Based Digital Dental Occlusion of the Partially Edentulous Dentition.

Jian Zhang, James J. Xia, Jianfu Li, Xiaobo Zhou

IEEE J. Biomed. Health Informatics, 2017

New quantum dialogue protocol based on continuous-variable two-mode squeezed vacuum states.

Nan-Run Zhou, Jianfu Li, Zhen-Bo Yu, Lihua Gong, Ahmed Farouk

Quantum Inf. Process., 2017

Altered Local Spatiotemporal Consistency of Resting-State BOLD Signals in Patients with Generalized Tonic-Clonic Seizures.

Shuai Ma, Sisi Jiang, Rui Peng, Qiong Zhu, Hongbin Sun, Jianfu Li, Xiaoyan Jia, Ilan Goldberg, Liang Yu, Cheng Luo

Frontiers Comput. Neurosci., 2017

Design, development and clinical validation of computer-aided surgical simulation system for streamlined orthognathic surgical planning.

Peng Yuan, Huaming Mai, Jianfu Li, Dennis Chun-Yu Ho, Yingying Lai, Siting Liu, Daeseung Kim, Zixiang Xiong, David M. Alfi, John Teichgraeber, Jaime Gateno, James J. Xia

Int. J. Comput. Assist. Radiol. Surg., 2017

Joint Craniomaxillofacial Bone Segmentation and Landmark Digitization by Context-Guided Fully Convolutional Networks.

Jun Zhang, Mingxia Liu, Li Wang, Si Chen, Peng Yuan, Jianfu Li, Steve Guo-Fang Shen, Zhen Tang, Ken-Chung Chen, James J. Xia, Dinggang Shen

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

Segmentation of Craniomaxillofacial Bony Structures from MRI with a 3D Deep-Learning Based Cascade Framework.

Dong Nie, Li Wang, Roger Trullo, Jianfu Li, Peng Yuan, James J. Xia, Dinggang Shen

Proceedings of the Machine Learning in Medical Imaging - 8th International Workshop, 2017

2016

A Novel Computer-Aided Surgical Simulation (CASS) System to Streamline Orthognathic Surgical Planning.

Peng Yuan, Dennis Chun-Yu Ho, Chien-Ming Chang, Jianfu Li, Huaming Mai, Daeseung Kim, Shunyao Shen, Xiaoyan Zhang, Xiaobo Zhou, Zixiang Xiong, Jaime Gateno, James J. Xia

Proceedings of the Medical Imaging and Augmented Reality - 7th International Conference, 2016

2015

Automated Three-Piece Digital Dental Articulation.

Jianfu Li, Flavio Ferraz, Shunyao Shen, Yi-Fang Lo, Xiaoyan Zhang, Peng Yuan, Zhen Tang, Ken-Chung Chen, Jaime Gateno, Xiaobo Zhou, James J. Xia

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

2014

Estimating Anatomically-Correct Reference Model for Craniomaxillofacial Deformity via Sparse Representation.

Yi Ren, Li Wang, Yaozong Gao, Zhen Tang, Ken-Chung Chen, Jianfu Li, Steve Guo-Fang Shen, Jin Yan, Philip K. M. Lee, Ben Chow, James J. Xia, Dinggang Shen

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

2013

Research on the Connecting Path Search Algorithm for Air-Rail Integration.

Tao Xu, Xiaolu Ding, Jianfu Li

J. Softw., 2013

2012

Key frame selection based on Jensen-Rényi divergence.

Qing Xu, Xiu Li, Zhen Yang, Jie Wang, Mateu Sbert, Jianfu Li

Proceedings of the 21st International Conference on Pattern Recognition, 2012

2010

Real Time Pedestrian Tracking using Thermal Infrared Imagery.

Jianfu Li, Weiguo Gong

J. Comput., 2010

2009

Intensity-Distance Projection Space Based Human Tracking in Far-Infrared Image Sequences.

Jianfu Li, Weiguo Gong, Jinfei Yang, Weihong Li

Proceedings of the CSIE 2009, 2009 WRI World Congress on Computer Science and Information Engineering, March 31, 2009