Jiahua He

According to our database, Jiahua He authored at least 13 papers between 2006 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2021

Full-length de novo protein structure determination from cryo-EM maps using deep learning.

Jiahua He, Sheng-You Huang

Bioinform., 2021

EMNUSS: a deep learning framework for secondary structure annotation in cryo-EM maps.

Jiahua He, Sheng-You Huang

Briefings Bioinform., 2021

2020

Topology-independent and global protein structure alignment through an FFT-based algorithm.

Zeyu Wen, Jiahua He, Sheng-You Huang

Bioinform., 2020

2019

HNADOCK: a nucleic acid docking server for modeling RNA/DNA-RNA/DNA 3D complex structures.

Jiahua He, Jun Wang, Huanyu Tao, Yi Xiao, Sheng-You Huang

Nucleic Acids Res., 2019

PepBDB: a comprehensive structural database of biological peptide-protein interactions.

Zeyu Wen, Jiahua He, Huanyu Tao, Sheng-You Huang

Bioinform., 2019

Protein-ensemble-RNA docking by efficient consideration of protein flexibility through homology models.

Jiahua He, Huanyu Tao, Sheng-You Huang

Bioinform., 2019

2011

PMap : unlocking the performance genes of HPC applications.

Jiahua He

PhD thesis, 2011

Automatic Recognition of Performance Idioms in Scientific Applications.

Jiahua He, Allan Snavely, Rob F. Van der Wijngaart, Michael A. Frumkin

Proceedings of the 25th IEEE International Symposium on Parallel and Distributed Processing, 2011

2010

DASH-IO: an empirical study of flash-based IO for HPC.

Jiahua He, Jeffrey Bennett, Allan Snavely

Proceedings of the 2010 TeraGrid Conference, 2010

DASH: a Recipe for a Flash-based Data Intensive Supercomputer.

Jiahua He, Arun Jagatheesan, Sandeep K. S. Gupta, Jeffrey Bennett, Allan Snavely

Proceedings of the Conference on High Performance Computing Networking, 2010

Understanding the Impact of Emerging Non-Volatile Memories on High-Performance, IO-Intensive Computing.

Adrian M. Caulfield, Joel Coburn, Todor I. Mollov, Arup De, Ameen Akel, Jiahua He, Arun Jagatheesan, Rajesh K. Gupta, Allan Snavely, Steven Swanson

Proceedings of the Conference on High Performance Computing Networking, 2010

2008

Code coverage, performance approximation and automatic recognition of idioms in scientific applications.

Jiahua He, Allan Snavely, Rob F. Van der Wijngaart, Michael A. Frumkin

Proceedings of the 17th International Symposium on High-Performance Distributed Computing (HPDC-17 2008), 2008

2006

Measuring the Performance and Reliability of Production Computational Grids.

Omid Khalili, Jiahua He, Catherine Olschanowsky, Allan Snavely, Henri Casanova

Proceedings of the 7th IEEE/ACM International Conference on Grid Computing (GRID 2006), 2006