Jerzy W. Jaromczyk

According to our database, Jerzy W. Jaromczyk authored at least 62 papers between 1981 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

RNA-clique: a method for computing genetic distances from RNA-seq data.

Andrew C. Tapia, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl

BMC Bioinform., December, 2024

2023

Optimization Perspectives on Shellsort.

Oscar Skean, Richard Ehrenborg, Jerzy W. Jaromczyk

CoRR, 2023

2020

Curricular Complexity Versus Quality of Computer Science Programs.

Gregory L. Heileman, Hayden W. Free, Johnny Flynn, Camden Mackowiak, Jerzy W. Jaromczyk, Chaouki T. Abdallah

CoRR, 2020

2018

An exercise in repeating experimental analysis using a program developed on a no longer available computing system.

Luke de Castro, Jerzy W. Jaromczyk

Proceedings of the ACMSE 2018 Conference, Richmond, KY, USA, March 29-31, 2018, 2018

2017

Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017.

Eric C. Rouchka, Julia H. Chariker, David Tieri, Juw Won Park, Shreedharkumar D. Rajurkar, Vikas Singh, Nishchal K. Verma, Yan Cui, Mark L. Farman, Bradford Condon, Neil Moore, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Daniel R. Harris, Patrick Calie, Eun Kyong Shin, Robert L. Davis, Arash Shaban-Nejad, Joshua M. Mitchell, Robert M. Flight, Qing Jun Wang, Richard M. Higashi, Teresa W.-M. Fan, Andrew N. Lane, Hunter N. B. Moseley, Liangqun Lu, Bernie J. Daigle, Xi Chen, Andrey Smelter, Li Chen, Bailey K. Phan, Nathaniel J. Serpico, Ethan G. Toney, Caroline E. Melton, Jennifer R. Mandel, Bernie J. Daigle Jr., Hao Chen, Kazi I. Zaman, Ramin Homayouni, Patrick J. Trainor, Samantha M. Carlisle, Andrew P. DeFilippis, Shesh N. Rai

BMC Bioinform., September, 2017

Rapid and Reusable Text Visualization and Exploration Development with DELVE.

Daniel R. Harris, Ramakanth Kavuluru, Jerzy W. Jaromczyk, Todd R. Johnson

Proceedings of the Summit on Clinical Research Informatics, 2017

2016

Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016: Cadiz, KY, USA. 8-10 April 2016.

Eric C. Rouchka, Julia H. Chariker, Benjamin J. Harrison, Juw Won Park, Xueyuan Cao, Stanley Pounds, Susana C. Raimondi, James R. Downing, Raul C. Ribeiro, Jeffrey Rubnitz, Jatinder Lamba, Bernie J. Daigle Jr., Deborah Burgess, Stephanie Gehrlich, John C. Carmen, Nicholas Johnson, Chandrakanth Emani, Kalpani De Silva, Michael P. Heaton, Theodore S. Kalbfleisch, Teeradache Viangteeravat, Rahul Mudunuri, Oluwaseun Ajayi, Fatih Sen, Eunice Y. Huang, Mohammad Mohebbi, Luaire Florian, Douglas J. Jackson, John F. Naber, Akm Sabbir, Sally R. Ellingson, Yuping Lu, Charles A. Phillips, Michael A. Langston, Rahul Kumar Sevakula, Raghuveer Thirukovalluru, Nishchal K. Verma, Yan Cui, Mohammed Sayed, Jing Wang, Qi Liu, Yu Shyr, Xiaofei Zhang, Naresh Prodduturi, Gavin R. Oliver, Diane Grill, Jie Na, Jeanette Eckel-Passow, Eric W. Klee, Michael M. Goodin, Mark L. Farman, Harrison Inocencio, Chanyong Jang, Jerzy W. Jaromczyk, Neil Moore, Kelly L. Sovacool, Leon Dent, Mike Izban, Sammed N. Mandape, Shruti S. Sakhare, Siddharth Pratap, Dana Marshall, M. Scotty Depriest, James N. MacLeod, Hanady Adam, Ethan Blandford, Joel Campbell, Joshua Castlen, Brittany Dixon, Ginger Gilbert, Aaron Hall, Philip Kreisle, Jessica Lasher, Bethany Oakes, Allison Speer, Maximilian Valentine, Naga Satya Venkateswara Ra Nagisetty, Rony Jose, Robert W. Rooney, David Hains

BMC Bioinform., August, 2016

Comparison of Network Architectures for a Telemetry System in the Solar Car Project.

Cody R. Barnes, Ethan G. Toney, Jerzy W. Jaromczyk

Proceedings of the 2016 Federated Conference on Computer Science and Information Systems, 2016

2015

Validation and quality assurance for genome browser database exports.

Roger G. Chui, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl

BMC Bioinform., December, 2015

2014

Automating deployment of several GBrowse instances.

Neil Moore, Jerzy W. Jaromczyk, Christopher L. Schardl, Joedocei Hill, Devin Wright

BMC Bioinform., 2014

An adaptive landscape for training in the essentials of next gen sequencing data acquisition and bioinformatic analysis.

Mark L. Farman, Patrick Calie, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Neil Moore, Daniel R. Harris, Christopher L. Schardl

BMC Bioinform., 2014

Video game bots as a theme for student software competitions.

Matthew Fahrbach, Jerzy W. Jaromczyk, Roy David Mobley, Neil Moore

Proceedings of the Computer Games: AI, 2014

2013

Using HPC for teaching and learning bioinformatics software: Benefits and challenges.

Tyler Parke, Mark L. Farman, Elizabeth Farnsworth, Derek Fox, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Neil Moore, Christopher L. Schardl, Ruriko Yoshida, Patrick Calie

BMC Bioinform., 2013

FPD2GB2: Automating a transition from a customized genome browser to GBrowse2.

Roger G. Chui, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl

BMC Bioinform., 2013

Teaching graphics for games using Microsoft XNA.

Radu Paul Mihail, Judy Goldsmith, Nathan Jacobs, Jerzy W. Jaromczyk

Proceedings of the 18th International Conference on Computer Games: AI, 2013

2012

Constructions of asymptotically shortest k-radius sequences.

Jerzy W. Jaromczyk, Zbigniew Lonc, Miroslaw Truszczynski

J. Comb. Theory A, 2012

A linear-time algorithm for finding a maximum-length ORF in a splice graph.

Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl

Int. J. Comput. Biol. Drug Des., 2012

Finding long protein products of alternatively spliced genes.

Neil Moore, Jerzy W. Jaromczyk, Christopher L. Schardl

BMC Bioinform., 2012

An efficient secure comparison protocol.

Zhenmin Lin, Jerzy W. Jaromczyk

Proceedings of the 2012 IEEE International Conference on Intelligence and Security Informatics, 2012

Modelling car drivers as believable autonomous agents for a traffic control training game.

Levon Ter-Isahakyan, Jerzy W. Jaromczyk

Proceedings of the 17th International Conference on Computer Games, 2012

2011

MSCTrees: a mean-shift based toolkit for cluster analysis of phylogenetic trees.

Weixi Li, Jerzy W. Jaromczyk

BMC Bioinform., 2011

Privacy preserving two-party k-means clustering over vertically partitioned dataset.

Zhenmin Lin, Jerzy W. Jaromczyk

Proceedings of the 2011 IEEE International Conference on Intelligence and Security Informatics, 2011

Privacy preserving spectral clustering over vertically partitioned data sets.

Zhenmin Lin, Jerzy W. Jaromczyk

Proceedings of the Eighth International Conference on Fuzzy Systems and Knowledge Discovery, 2011

Finding a longest open reading frame of an alternatively spliced gene.

Neil Moore, Jerzy W. Jaromczyk

Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2010

Experimenting with database segmentation size vs time performance for mpiBLAST on an IBM HS21 blade cluster.

Daniel R. Harris, Jerzy W. Jaromczyk, Christopher L. Schardl

BMC Bioinform., 2010

<i>Phylotree</i> - a toolkit for computing experiments with distance-based methods for genome coevolution.

Elissaveta G. Arnaoudova, Jerzy W. Jaromczyk, Neil Moore, Christopher L. Schardl, Ruriko Yoshida

BMC Bioinform., 2010

2009

Visualizing and sharing results in bioinformatics projects: GBrowse and GenBank exports.

Elissaveta G. Arnaoudova, Philip J. Bowens, Roger G. Chui, Randy D. Dinkins, Uljana Hesse, Jerzy W. Jaromczyk, Mitchell Martin, Paul Maynard, Neil Moore, Christopher L. Schardl

BMC Bioinform., 2009

2008

MedSurv: a software application for creating, conducting and managing medical surveys and questionnaires.

Zachary S. Ware, Lisbeth A. Selby, Jerzy W. Jaromczyk

BMC Bioinform., 2008

2007

Making the SAT decision Based on a DNA Computation.

Joseph Ibershoff, Jerzy W. Jaromczyk, Danny van Noort

Proceedings of the IEEE Congress on Evolutionary Computation, 2007

The genetic algorithm scheme for consensus sequences.

Joshua W. Gilkerson, Jerzy W. Jaromczyk

Proceedings of the IEEE Congress on Evolutionary Computation, 2007

2006

Support for XML markup of image-based electronic editions.

Alex Dekhtyar, Ionut Emil Iacob, Jerzy W. Jaromczyk, Kevin Kiernan, Neil Moore, Dorothy C. Porter

Int. J. Digit. Libr., 2006

Simulations of Microreactors: The Order of Things.

Joseph Ibershoff, Jerzy W. Jaromczyk, Danny van Noort

Proceedings of the DNA Computing, 12th International Meeting on DNA Computing, 2006

2005

Building Image-based Electronic Editions using the Edition Production Technology.

Alex Dekhtyar, Ionut Emil Iacob, Jerzy W. Jaromczyk, Kevin Kiernan, Neil Moore, Dorothy C. Porter

Bull. IEEE Tech. Comm. Digit. Libr., 2005

Simulation and Visualization for DNA Computing in Microreactors.

Danny van Noort, Yuan Hong, Joseph Ibershoff, Jerzy W. Jaromczyk

Proceedings of the Advances in Natural Computation, First International Conference, 2005

2004

Editorial.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

Comput. Geom., 2004

A web interface to image-based concurrent markup using image maps.

Jerzy W. Jaromczyk, Miroslaw Kowaluk, Neil Moore

Proceedings of the Sixth ACM CIKM International Workshop on Web Information and Data Management (WIDM 2004), 2004

Sequences of Radius k: How to Fetch Many Huge Objects into Small Memory for Pairwise Computations.

Jerzy W. Jaromczyk, Zbigniew Lonc

Proceedings of the Algorithms and Computation, 15th International Symposium, 2004

On Visualization of Complex Image-Basedmarkup.

Jerzy W. Jaromczyk, Miroslaw Kowaluk, Neil Moore

Proceedings of the International Conference on Computer Vision and Graphics, 2004

Visualizing Articular Cartilage using Expectation Maximization to Compare Segmentation Ofmrimages by Independent raters.

Peter A. Hardy, Jerzy W. Jaromczyk, Paul J. Thacker

Proceedings of the International Conference on Computer Vision and Graphics, 2004

RepeatAssembler: A Package for Annotation of Full-Length Repetitive DNA Sequences in Fungal Genomes.

Mark L. Farman, Joshua W. Gilkerson, Jerzy W. Jaromczyk, Chuck Staben

Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

2003

Sets of lines and cutting out polyhedral objects.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

Comput. Geom., 2003

2001

Local optimization of triangular surface meshes for general quadrics in lp norm.

Jerzy W. Jaromczyk, Yang Wang

Proceedings of the 13th Canadian Conference on Computational Geometry, 2001

2000

The Face-Wise Continuity in Hot Wire Cutting of Polyhedral Sets.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

EuroCG, 2000

1999

A geometric proof of the combinatorial bounds for the number of optimal solutions for the Euclidean 2-center problem.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

Comput. Geom., 1999

1996

A Theory of Even Functionals and Their Algorithmic Applications.

Jerzy W. Jaromczyk, Grzegorz Swiatek

Theor. Comput. Sci., 1996

1995

The Two-Line Center Problem from a Polar View: A New Algorithm and Data Structure.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

Proceedings of the Algorithms and Data Structures, 4th International Workshop, 1995

A geometric proof of the combinatorial bounds the number of optimal solutions for the 2-center euclidean problem.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

Proceedings of the 7th Canadian Conference on Computational Geometry, 1995

1994

Computing Convex Hull in a Floating Point Arithmetic.

Jerzy W. Jaromczyk, Grzegorz W. Wasilkowski

Comput. Geom., 1994

An Efficient Algorithm for the Euclidean Two-Center Problem.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

Proceedings of the Tenth Annual Symposium on Computational Geometry, 1994

1993

Numerical Stability of a Convex Hull Algorithm for Simple Polygons.

Jerzy W. Jaromczyk, Grzegorz W. Wasilkowski

Algorithmica, 1993

1992

Relative neighborhood graphs and their relatives.

Jerzy W. Jaromczyk, Godfried T. Toussaint

Proc. IEEE, 1992

1991

A role of lower semicontinuous functions in the combinatorial complexity of geometric problems.

Jerzy W. Jaromczyk, Grzegorz Swiatek

J. Complex., 1991

Constructing the relative neighborhood graph in 3-dimensional Euclidean space.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

Discret. Appl. Math., 1991

1989

A Note on Lower Bounds for the Maximum Area and Maximum Perimeter (kappa)k-gon Problems.

Robert L. (Scot) Drysdale III, Jerzy W. Jaromczyk

Inf. Process. Lett., 1989

1988

Skewed Projections with an Application to Line Stabbing in R3.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

Proceedings of the Fourth Annual Symposium on Computational Geometry, 1988

1987

Investigating Logical Properties of the Rule-Based Expert Systems Using Combinatorial and Geometrical Techniques I.

Jerzy W. Jaromczyk, V. Wiktor Marek

Proceedings of the Methodologies for Intelligent Systems, 1987

A Note on Relative Neighborhood Graphs.

Jerzy W. Jaromczyk, Miroslaw Kowaluk

Proceedings of the Third Annual Symposium on Computational Geometry, 1987

1984

Some results on decision trees with relations to computational trees.

Jerzy W. Jaromczyk

Proceedings of the Computation Theory, 1984

Lower Bounds for Polygon Simplicity Testing and Other Problems.

Jerzy W. Jaromczyk

Proceedings of the Mathematical Foundations of Computer Science 1984, 1984

1981

Linear Decision Trees are too Weak for Convex Hull Problem.

Jerzy W. Jaromczyk

Inf. Process. Lett., 1981

An Extension of Rabin's Complete Proof Concept.

Jerzy W. Jaromczyk

Proceedings of the Mathematical Foundations of Computer Science 1981, Strbske Pleso, Czechoslovakia, August 31, 1981

Lower Bounds for Problems Defined by Polynomial Inequalities.

Jerzy W. Jaromczyk

Proceedings of the Fundamentals of Computation Theory, 1981