Jean-Stéphane Varré

According to our database, Jean-Stéphane Varré authored at least 17 papers between 1998 and 2020.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2020

yacrd and fpa: upstream tools for long-read genome assembly.

Pierre Marijon, Rayan Chikhi, Jean-Stéphane Varré

Bioinform., 2020

2019

Graph analysis of fragmented long-read bacterial genome assemblies.

Pierre Marijon, Rayan Chikhi, Jean-Stéphane Varré

Bioinform., 2019

2015

Perfect Hashing Structures for Parallel Similarity Searches.

Tuan Tu Tran, Mathieu Giraud, Jean-Stéphane Varré

Proceedings of the 2015 IEEE International Parallel and Distributed Processing Symposium Workshop, 2015

2012

Tandem Halving Problems by DCJ.

Antoine Thomas, Aïda Ouangraoua, Jean-Stéphane Varré

Proceedings of the Algorithms in Bioinformatics - 12th International Workshop, 2012

Single Tandem Halving by Block Interchange.

Antoine Thomas, Aïda Ouangraoua, Jean-Stéphane Varré

Proceedings of the Biomedical Engineering Systems and Technologies, 2012

Genome Halving by Block Interchange.

Antoine Thomas, Aïda Ouangraoua, Jean-Stéphane Varré

Proceedings of the BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1, 2012

2011

Parallel Position Weight Matrices algorithms.

Mathieu Giraud, Jean-Stéphane Varré

Parallel Comput., 2011

Genome dedoubling by DCJ and reversal.

Antoine Thomas, Jean-Stéphane Varré, Aïda Ouangraoua

BMC Bioinform., 2011

Bit-Parallel Multiple Pattern Matching.

Tuan Tu Tran, Mathieu Giraud, Jean-Stéphane Varré

Proceedings of the Parallel Processing and Applied Mathematics, 2011

2010

TFM-Explorer: mining <i>cis</i>-regulatory regions in genomes.

Laurie Tonon, Hélène Touzet, Jean-Stéphane Varré

Nucleic Acids Res., 2010

2009

Self-overlapping Occurrences and Knuth-Morris-Pratt Algorithm for Weighted Matching.

Aude Liefooghe, Hélène Touzet, Jean-Stéphane Varré

Proceedings of the Language and Automata Theory and Applications, 2009

2008

Algorithmes pour la comparaison de génomes et la recherche de signaux cis-régulateurs.

Jean-Stéphane Varré

, 2008

2007

Efficient and accurate P-value computation for Position Weight Matrices.

Hélène Touzet, Jean-Stéphane Varré

Algorithms Mol. Biol., 2007

2006

Large Scale Matching for Position Weight Matrices.

Aude Liefooghe, Hélène Touzet, Jean-Stéphane Varré

Proceedings of the Combinatorial Pattern Matching, 17th Annual Symposium, 2006

2004

Sorting by Reversals with Common Intervals.

Martin Figeac, Jean-Stéphane Varré

Proceedings of the Algorithms in Bioinformatics, 4th International Workshop, 2004

1999

Transformation distances: a family of dissimilarity measures based on movements of segments.

Jean-Stéphane Varré, Jean-Paul Delahaye, Eric Rivals

Bioinform., 1999

1998

The transformation distance: A dissimilarity measure based an movements of segments.

Jean-Stéphane Varré, Jean-Paul Delahaye, Eric Rivals

Proceedings of the German Conference on Bioinformatics, 1998