Jean-Luc Gouzé

SIAM J. Appl. Math., 2024

Kalman-based approaches for online estimation of bioreactor dynamics from fluorescent reporter measurements.

[BibT_eX]

[DOI]

Rand Asswad

Eugenio Cinquemani

Proceedings of the European Control Conference, 2024

2023

Qualitative Control Strategies for Synchronization of Bistable Gene Regulatory Networks.

[BibT_eX]

[DOI]

Nicolas Augier

IEEE Trans. Autom. Control., February, 2023

2022

Dynamical Analysis and Optimization of a Generalized Resource Allocation Model of Microbial Growth.

[BibT_eX]

[DOI]

Hidde de Jong

Francis Mairet

SIAM J. Appl. Dyn. Syst., 2022

Turnpike Property in Optimal Microbial Metabolite Production.

[BibT_eX]

[DOI]

J. Optim. Theory Appl., 2022

Optimal allocation of bacterial resources in fed-batch reactors.

[BibT_eX]

[DOI]

Proceedings of the European Control Conference, 2022

Bacteria Mutualism in a Chemostat: Analysis and Optimization with Interval Detector.

[BibT_eX]

[DOI]

Juan Carlos Arceo

Proceedings of the 61st IEEE Conference on Decision and Control, 2022

2021

Hierarchical MPC applied to bacterial resource allocation and metabolite synthesis.

[BibT_eX]

[DOI]

Proceedings of the 2021 60th IEEE Conference on Decision and Control (CDC), 2021

2020

Enhanced production of heterologous proteins by a synthetic microbial community: Conditions and trade-offs.

[BibT_eX]

[DOI]

PLoS Comput. Biol., 2020

Robust adaptive estimation in the competitive chemostat.

[BibT_eX]

[DOI]

Alex dos Reis de Souza

Denis V. Efimov

Andrey Polyakov

Comput. Chem. Eng., 2020

Qualitative control of undesired oscillations in a genetic negative feedback loop with uncertain measurements.

[BibT_eX]

[DOI]

Lucie Chambon

Autom., 2020

Control of negative feedback loops in genetic networks.

[BibT_eX]

[DOI]

Roderick Edwards

Proceedings of the 59th IEEE Conference on Decision and Control, 2020

2019

Optimal control of bacterial growth for metabolite production: The role of timing and costs of control.

[BibT_eX]

[DOI]

Proceedings of the 17th European Control Conference, 2019

Singular regimes for the maximization of metabolite production ∗.

[BibT_eX]

[DOI]

Proceedings of the 58th IEEE Conference on Decision and Control, 2019

Robust Control of a Competitive Environment in the Chemostat using Discontinuous Control Laws.

[BibT_eX]

[DOI]

Alex dos Reis de Souza

Denis V. Efimov

Andrey E. Polyakov

Proceedings of the 58th IEEE Conference on Decision and Control, 2019

Global asymptotic stability of a genetic negative feedback loop with an affine control.

[BibT_eX]

[DOI]

Lucie Chambon

Proceedings of the 58th IEEE Conference on Decision and Control, 2019

2018

A Stability Result for Periodic Solutions of Nonmonotonic Smooth Negative Feedback Systems.

[BibT_eX]

[DOI]

Camille Poignard

SIAM J. Appl. Dyn. Syst., 2018

Analytical Reduction of Nonlinear Metabolic Networks Accounting for Dynamics in Enzymatic Reactions.

[BibT_eX]

[DOI]

Claudia López Zazueta

Complex., 2018

Principal process analysis of biological models.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2018

2016

Hybrid Control of a Bioreactor With Quantized Measurements.

[BibT_eX]

[DOI]

Francis Mairet

IEEE Trans. Autom. Control., 2016

Periodic Oscillations for Nonmonotonic Smooth Negative Feedback Circuits.

[BibT_eX]

[DOI]

Camille Poignard

SIAM J. Appl. Dyn. Syst., 2016

Dynamical Allocation of Cellular Resources as an Optimal Control Problem: Novel Insights into Microbial Growth Strategies.

[BibT_eX]

[DOI]

PLoS Comput. Biol., 2016

2015

Continuous-switch piecewise quadratic models of biological networks: Application to bacterial growth.

[BibT_eX]

[DOI]

Alfonso Carta

Autom., 2015

Model reduction and process analysis of biological models.

[BibT_eX]

[DOI]

Stefano Casagranda

Delphine Ropers

Proceedings of the 23rd Mediterranean Conference on Control and Automation, 2015

2014

Mathematical study of the global dynamics of a concave gene expression model.

[BibT_eX]

[DOI]

Proceedings of the 22nd Mediterranean Conference on Control and Automation, 2014

Control of a Bioreactor with Quantized Measurements.

[BibT_eX]

[DOI]

Francis Mairet

Proceedings of the Formal Methods in Macro-Biology - First International Conference, 2014

Stability analysis of a reduced transcription-translation model of RNA polymerase.

[BibT_eX]

[DOI]

Proceedings of the 53rd IEEE Conference on Decision and Control, 2014

2013

Positive Control for Global Stabilization of Predator-Prey Systems.

[BibT_eX]

[DOI]

Frédéric Grognard

Jonathan Rault

Proceedings of the 9th IFAC Symposium on Nonlinear Control Systems, 2013

A Class of Switched Piecewise Quadratic Systems for Coupling Gene Expression with Growth Rate in Bacteria.

[BibT_eX]

[DOI]

Alfonso Carta

Proceedings of the 9th IFAC Symposium on Nonlinear Control Systems, 2013

Stability analysis and reduction of gene transcription models.

[BibT_eX]

[DOI]

Proceedings of the 52nd IEEE Conference on Decision and Control, 2013

2012

A Simple Model to Control Growth Rate of Synthetic E. coli during the Exponential Phase: Model Analysis and Parameter Estimation.

[BibT_eX]

[DOI]

Alfonso Carta

Proceedings of the Computational Methods in Systems Biology, 2012

2011

Exact control of genetic networks in a qualitative framework: The bistable switch example.

[BibT_eX]

[DOI]

Autom., 2011

An observer for a piecewise affine genetic network model with Boolean observations.

[BibT_eX]

[DOI]

Xiao-Dong Li

Proceedings of the 50th IEEE Conference on Decision and Control and European Control Conference, 2011

2010

Limit cycles in piecewise-affine gene network models with multiple interaction loops.

[BibT_eX]

[DOI]

Etienne Farcot

Int. J. Syst. Sci., 2010

2009

Near optimal interval observers bundle for uncertain bioreactors.

[BibT_eX]

[DOI]

Marcelo Moisan

Autom., 2009

2008

Hierarchical analysis of piecewise affine models of gene regulatory networks.

[BibT_eX]

[DOI]

Laurent Tournier

Theory Biosci., 2008

Global stabilization of a class of partially known nonnegative systems.

[BibT_eX]

[DOI]

Ludovic Mailleret

Autom., 2008

A mathematical framework for the control of piecewise-affine models of gene networks.

[BibT_eX]

[DOI]

Etienne Farcot

Autom., 2008

Two simple growth models in the chemostat.

[BibT_eX]

[DOI]

Valérie Lemesle

ARIMA J., 2008

Qualitative Stability Patterns for Lotka-Volterra Systems on Rectangles.

[BibT_eX]

[DOI]

Laurent Tournier

Proceedings of the Hybrid Systems: Computation and Control, 11th International Workshop, 2008

2007

Analyse qualitative de la dynamique de réseaux de régulation génique par des modèles linéaires par morceaux.

[BibT_eX]

[DOI]

Tech. Sci. Informatiques, 2007

Piecewise Constant Feedback Control of Piecewise Affine Gene Network Models.

[BibT_eX]

[DOI]

Etienne Farcot

Proceedings of the Hybrid Systems: Computation and Control, 10th International Workshop, 2007

2006

Feedback control for competition models with mortality in the chemostat.

[BibT_eX]

[DOI]

Gonzalo Robledo

Proceedings of the 45th IEEE Conference on Decision and Control, 2006

2005

Stability of Equilibria for Piecewise-linear Models of Genetic Regulatory Networks.

[BibT_eX]

[DOI]

Richard Casey

Hidde de Jong

Proceedings of the 44th IEEE IEEE Conference on Decision and Control and 8th European Control Conference Control, 2005

2003

Differential Systems with Positive Variables.

[BibT_eX]

[DOI]

Proceedings of the Positive Systems, 2003

Hybrid Modeling and Simulation of Genetic Regulatory Networks: A Qualitative Approach.

[BibT_eX]

[DOI]

Proceedings of the Hybrid Systems: Computation and Control, 2003

Nonlinear control for algae growth models in the chemostat.

[BibT_eX]

[DOI]

Ludovic Mailleret

Proceedings of the 7th European Control Conference, 2003

A two dimensional bounded error observer for a class of bioreactor models.

[BibT_eX]

[DOI]

Valérie Lemesle

Proceedings of the 7th European Control Conference, 2003

2002

Global qualitative description of a class of nonlinear dynamical systems.

[BibT_eX]

[DOI]

Artif. Intell., 2002

Dealing with Discontinuities in the Qualitative Simulation of Genetic Regulatory Networks.

[BibT_eX]

Proceedings of the 15th European Conference on Artificial Intelligence, 2002

2001

Discrimination of Semi-Quantitative Models by Experiment Selection: Method and Application in Population Biology.

[BibT_eX]

Proceedings of the Seventeenth International Joint Conference on Artificial Intelligence, 2001

A bounded error observer with adjustable rate for a class of bioreactor models.

[BibT_eX]

[DOI]

Valérie Lemesle

Proceedings of the 6th European Control Conference, 2001

2000

Observers for the biotechnological processes with unknown kinetics. Application to wastewater treatment.

[BibT_eX]

[DOI]

M. Z. Hadj-Sadok

Proceedings of the 39th IEEE Conference on Decision and Control, 2000

1999

Practical observers for uncertain affine output injection systems.

[BibT_eX]

[DOI]

Alain Rapaport

Proceedings of the 5th European Control Conference, 1999

Comparison between two interval observers for wastewater treatment models.

[BibT_eX]

[DOI]

M. Z. Hadj-Sadok