Jean-Baptiste Poline

Orcid: 0000-0002-9794-749X

According to our database1, Jean-Baptiste Poline authored at least 177 papers between 1994 and 2024.

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Bibliography

2024
Ten simple rules for recognizing data and software contributions in hiring, promotion, and tenure.
PLoS Comput. Biol., 2024

fastHDMI: Fast Mutual Information Estimation for High-Dimensional Data.
CoRR, 2024

Predicting Parkinson's disease trajectory using clinical and functional MRI features: a reproduction and replication study.
CoRR, 2024

2023
nipy/nibabel: 5.2.0.
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Dataset, December, 2023

bids-specification.
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Dataset, November, 2023





nipy/nibabel: 5.1.0.
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Dataset, April, 2023

NeuroBridge: a prototype platform for discovery of the long-tail neuroimaging data.
Frontiers Neuroinformatics, March, 2023

NIDM-Terms: community-based terminology management for improved neuroimaging dataset descriptions and query.
Frontiers Neuroinformatics, March, 2023


nipy/nibabel: 5.0.1.
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Dataset, February, 2023

nipy/nibabel: 5.0.0.
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Dataset, January, 2023

The Canadian Open Neuroscience Platform - An open science framework for the neuroscience community.
PLoS Comput. Biol., 2023

2022



nipy/nibabel.
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Dataset, June, 2022

nipy/nibabel: 4.0.0rc0.
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Dataset, June, 2022

nipy/nibabel: 3.2.2.
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Dataset, June, 2022




Beyond advertising: New infrastructures for publishing integrated research objects.
PLoS Comput. Biol., 2022

Promoting FAIR Data Through Community-driven Agile Design: the Open Data Commons for Spinal Cord Injury (odc-sci.org).
Neuroinformatics, 2022

Is Neuroscience FAIR? A Call for Collaborative Standardisation of Neuroscience Data.
Neuroinformatics, 2022

Correction to: A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility.
Neuroinformatics, 2022

A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility.
Neuroinformatics, 2022

Micapipe: A pipeline for multimodal neuroimaging and connectome analysis.
NeuroImage, 2022

The Neuroimaging Data Model Linear Regression Tool (nidm_linreg): PyNIDM Project.
F1000Research, 2022

Benchmarking missing-values approaches for predictive models on health databases.
CoRR, 2022

Recommendations for repositories and scientific gateways from a neuroscience perspective.
CoRR, 2022

NIDM-Experiment: An Ontology for Annotating Neuroscientific Data.
Proceedings of the International Conference on Biomedical Ontology 2022 (ICBO), Ann Arbor, Michigan, USA, September 25, 2022

NeuroCI: Continuous Integration of Neuroimaging Results Across Software Pipelines and Datasets.
Proceedings of the 18th IEEE International Conference on e-Science, 2022

2021




On the open-source landscape of PLOS Computational Biology.
PLoS Comput. Biol., 2021

An empirical evaluation of functional alignment using inter-subject decoding.
NeuroImage, 2021

BIDSonym: a BIDS App for the pseudo-anonymization of neuroimaging datasets.
J. Open Source Softw., 2021

DataLad: distributed system for joint management of code, data, and their relationship.
J. Open Source Softw., 2021

Preventing dataset shift from breaking machine-learning biomarkers.
CoRR, 2021

2020
nipy/nibabel: 3.2.1.
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Dataset, November, 2020



nipy/nibabel: 3.2.0.
, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , ,
Dataset, October, 2020




nipy/nibabel: 3.1.1.
Dataset, June, 2020

nipy/nibabel: 3.1.0.
Dataset, April, 2020


nipy/nibabel: 3.0.2.
Dataset, March, 2020



nipy/nibabel: 3.0.1.
Dataset, January, 2020

Brain status modeling with non-negative projective dictionary learning.
NeuroImage, 2020

Nature abhors a paywall: How open science can realize the potential of naturalistic stimuli.
NeuroImage, 2020

Group-Patch Based Classification and Asymptotic Predicting Imbalanced Neuron Spikes.
Proceedings of the 2020 International Joint Conference on Neural Networks, 2020

Deep Discriminative Learning for Autism Spectrum Disorder Classification.
Proceedings of the Database and Expert Systems Applications, 2020

2019

















PyBIDS: Python tools for BIDS datasets.
J. Open Source Softw., 2019

From the Wet Lab to the Web Lab: A Paradigm Shift in Brain Imaging Research.
Frontiers Neuroinformatics, 2019

Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging.
Frontiers Neuroinformatics, 2019

Modeling and Analysis Brain Development via Discriminative Dictionary Learning.
Proceedings of the Machine Learning for Medical Image Reconstruction, 2019

2018
Connectivity in fMRI: Blind Spots and Breakthroughs.
IEEE Trans. Medical Imaging, 2018

Atlases of cognition with large-scale human brain mapping.
PLoS Comput. Biol., 2018

2017
Improving data availability for brain image biobanking in healthy subjects: Practice-based suggestions from an international multidisciplinary working group.
NeuroImage, 2017

2016
Transport on Riemannian Manifold for Connectivity-Based Brain Decoding.
IEEE Trans. Medical Imaging, 2016

NeuroVault.org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain.
NeuroImage, 2016

2015
Robust regression for large-scale neuroimaging studies.
NeuroImage, 2015

NeuroVault.org: a web-based repository for collecting and sharing unthresholded statistical maps of the human brain.
Frontiers Neuroinformatics, 2015

Bootstrapped Permutation Test for Multiresponse Inference on Brain Behavior Associations.
Proceedings of the Information Processing in Medical Imaging, 2015

2014
Software for Neuroimaging Data Analysis.
Proceedings of the Encyclopedia of Computational Neuroscience, 2014

Randomized parcellation based inference.
NeuroImage, 2014

Interoperable atlases of the human brain.
NeuroImage, 2014

Generic Machine Learning Pattern for Neuroimaging-Genetic Studies in the Cloud.
Frontiers Neuroinformatics, 2014

Comment on "A simple tool for neuroimaging data sharing".
Frontiers Neuroinformatics, 2014

A simple tool for neuroimaging data sharing.
Frontiers Neuroinformatics, 2014

Transport on Riemannian Manifold for Functional Connectivity-Based Classification.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

2013
Introduction to the special issue: Toward a new era of databasing and data sharing for neuroimaging.
NeuroImage, 2013

Robust Group-Level Inference in Neuroimaging Genetic Studies.
Proceedings of the International Workshop on Pattern Recognition in Neuroimaging, 2013

Implications of Inconsistencies between fMRI and dMRI on Multimodal Connectivity Estimation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Enhancing the Reproducibility of Group Analysis with Randomized Brain Parcellations.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

A Novel Sparse Group Gaussian Graphical Model for Functional Connectivity Estimation.
Proceedings of the Information Processing in Medical Imaging, 2013

2012
An empirical comparison of surface-based and volume-based group studies in neuroimaging.
NeuroImage, 2012

Very large fMRI study using the IMAGEN database: Sensitivity-specificity and population effect modeling in relation to the underlying anatomy.
NeuroImage, 2012

Why shared data should not be acknowledged on the author byline.
NeuroImage, 2012

The general linear model and fMRI: Does love last forever?
NeuroImage, 2012

Manual dexterity correlating with right lobule VI volume in right-handed 14-year-olds.
NeuroImage, 2012

Significant correlation between a set of genetic polymorphisms and a functional brain network revealed by feature selection and sparse Partial Least Squares.
NeuroImage, 2012

Detecting outliers in high-dimensional neuroimaging datasets with robust covariance estimators.
Medical Image Anal., 2012

PyXNAT: XNAT in Python.
Frontiers Neuroinformatics, 2012

Data sharing in neuroimaging research.
Frontiers Neuroinformatics, 2012

Connectivity-informed Sparse Classifiers for fMRI Brain Decoding.
Proceedings of the Second International Workshop on Pattern Recognition in NeuroImaging, 2012

Improving Accuracy and Power with Transfer Learning Using a Meta-analytic Database.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

A Novel Sparse Graphical Approach for Multimodal Brain Connectivity Inference.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Non-parametric Density Modeling and Outlier-Detection in Medical Imaging Datasets.
Proceedings of the Machine Learning in Medical Imaging - Third International Workshop, 2012

Discovering associations in high dimensional imaging-genetics data: A comparison study of dimension reduction and regularisation strategies combined with partial least squares.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2011
Boys do it the right way: Sex-dependent amygdala lateralization during face processing in adolescents.
NeuroImage, 2011

Connectivity-Informed fMRI Activation Detection.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Detecting Outlying Subjects in High-Dimensional Neuroimaging Datasets with Regularized Minimum Covariance Determinant.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

2010
A group model for stable multi-subject ICA on fMRI datasets.
NeuroImage, 2010

Brain covariance selection: better individual functional connectivity models using population prior.
Proceedings of the Advances in Neural Information Processing Systems 23: 24th Annual Conference on Neural Information Processing Systems 2010. Proceedings of a meeting held 6-9 December 2010, 2010

Accurate Definition of Brain Regions Position through the Functional Landmark Approach.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

ICA-based sparse features recovery from FMRI datasets.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

Connectivity feature extraction for spatio-functional clustering of fMRI data.
Proceedings of the 2nd International Conference on Image Processing Theory Tools and Applications, 2010

A supervised clustering approach for extracting predictive information from brain activation images.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2010

Parcellation Schemes and Statistical Tests to Detect Active Regions on the Cortical Surface.
Proceedings of the 19th International Conference on Computational Statistics, 2010

Imaging Genetics: Bio-Informatics and Bio-Statistics Challenges.
Proceedings of the 19th International Conference on Computational Statistics, 2010

2009
CanICA: Model-based extraction of reproducible group-level ICA patterns from fMRI time series
CoRR, 2009

Discriminative Network Models of Schizophrenia.
Proceedings of the Advances in Neural Information Processing Systems 22: 23rd Annual Conference on Neural Information Processing Systems 2009. Proceedings of a meeting held 7-10 December 2009, 2009

2008
Processing 3D form and 3D motion: Respective contributions of attention-based and stimulus-driven activity.
NeuroImage, 2008

Probabilistic Anatomo-Functional Parcellation of the Cortex: How Many Regions?.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Triangulating cortical functional networks with anatomical landmarks.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Blind source separation approaches to remove imaging artefacts in EEG signals recorded simultaneously with FMRI.
Proceedings of the 2008 16th European Signal Processing Conference, 2008

2007
Structural Analysis of fMRI Data Revisited: Improving the Sensitivity and Reliability of fMRI Group Studies.
IEEE Trans. Medical Imaging, 2007

Analysis of a large fMRI cohort: Statistical and methodological issues for group analyses.
NeuroImage, 2007

High Level Group Analysis of FMRI Data Based on Dirichlet Process Mixture Models.
Proceedings of the Information Processing in Medical Imaging, 2007

2006
Detection of signal synchronizations in resting-state fMRI datasets.
NeuroImage, 2006

Inverse retinotopy: Inferring the visual content of images from brain activation patterns.
NeuroImage, 2006

Anatomically informed interpolation of fMRI data on the cortical surface.
NeuroImage, 2006

Are fMRI event-related response constant in time? A model selection answer.
NeuroImage, 2006

Reading the brain visual system as an inverse problem.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

Joint detection-estimation of brain activity in fMRI using an autoregressive noise model.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

Anatomo-Functional Description of the Brain : A Probabilistic Approach.
Proceedings of the 2006 IEEE International Conference on Acoustics Speech and Signal Processing, 2006

Bayesian Joint Detection-Estimation of Brain Activity Using MCMC With a Gamma-Gaussian Mixture Prior Model.
Proceedings of the 2006 IEEE International Conference on Acoustics Speech and Signal Processing, 2006

Improving Sensitivity and Reliability of fMRI Group Studies through High Level Combination of Individual Subjects Results.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2006

2005
Joint detection-estimation of brain activity in functional MRI: a Multichannel Deconvolution solution.
IEEE Trans. Signal Process., 2005

Valid conjunction inference with the minimum statistic.
NeuroImage, 2005

Finding Landmarks in the Functional Brain: Detection and Use for Group Characterization.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

MR Diffusion-Based Inference of a Fiber Bundle Model from a Population of Subjects.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

2004
Automatized clustering and functional geometry of human parietofrontal networks for language, space, and number.
NeuroImage, 2004

Coordinate-based versus structural approaches to brain image analysis.
Artif. Intell. Medicine, 2004

Solving Incrementally the Fitting and Detection Problems in fMRI Time Series.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Incremental Activation Detection in fMRI Series Using Kalman Filtering.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

Semi-Blind Deconvolution of Neural Impulse Response in Event-Related fMRI Using a Gibbs Sampler.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

Fusion of Simultaneous fMRI/EEG Data Based on the Electro-Metabolic Coupling.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

Selection of Temporal Models for Event-Related fMRI.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

The Influence of Heart Beat and Respiration on Functional Connectivity Networks.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

Semi-blind deconvolution of neural impulse response in fMRI using a Gibbs sampling method.
Proceedings of the 2004 IEEE International Conference on Acoustics, 2004

2003
Unsupervised robust non-parametric estimation of the hemodynamic response function for any fMRI experiment.
IEEE Trans. Medical Imaging, 2003

A Primal Sketch of the Cortex Mean Curvature: a Morphogenesis Based Approach to Study the Variability of the Folding Patters.
IEEE Trans. Medical Imaging, 2003

Functional connectivity: studying nonlinear, delayed interactions between BOLD signals.
NeuroImage, 2003

Group analysis in functional neuroimaging: selecting subjects using similarity measures.
NeuroImage, 2003

Basal ganglia and supplementary motor area subtend duration perception: an fMRI study.
NeuroImage, 2003

2002
In Vivo Detection of Striatal Dopamine Release during Reward: A PET Study with [<sup>11</sup>C]Raclopride and a Single Dynamic Scan Approach.
NeuroImage, 2002

Estimating the Delay of the fMRI Response.
NeuroImage, 2002

Multivariate Model Specification for fMRI Data.
NeuroImage, 2002

Model Based Spatial and Temporal Similarity Measures between Series of Functional Magnetic Resonance Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Improved Detection Sensitivity in Functional MRI Data Using a Brain Parcelling Technique.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Parcellation of brain images with anatomical and functional constraints for fMRI data analysis.
Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

Robust estimation of the hemodynamic response function in asynchronous multitasks multisessions event-related fMRI paradigms.
Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

Hierarchical multivariate group analysis of functional MRI data.
Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

2001
Delayed Verbal Memory Retrieval: A Functional MRI Study in Epileptic Patients with Structural Lesions of the Left Medial Temporal Lobe.
NeuroImage, 2001

A Mean Curvature Based Primal Sketch to Study the Cortical Folding Process from Antenatal to Adult Brain.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

1999
Structural Group Analysis of Functional Maps.
Proceedings of the Information Processing in Medical Imaging, 1999

1994
Analysis of individual brain activation maps using hierarchical description and multiscale detection.
IEEE Trans. Medical Imaging, 1994


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