Javier Setoain

According to our database, Javier Setoain authored at least 16 papers between 2006 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

GenArchBench: A genomics benchmark suite for arm HPC processors.

Lorién López-Villellas, Rubén Langarita-Benítez, Asaf Badouh, Víctor Soria Pardos, Quim Aguado-Puig, Guillem López-Paradís, Max Doblas, Javier Setoain, Chulho Kim, Makoto Ono, Adrià Armejach, Santiago Marco-Sola, Jesús Alastruey-Benedé, Pablo Ibáñez, Miquel Moretó

Future Gener. Comput. Syst., 2024

2022

Compressed Sparse FM-Index: Fast Sequence Alignment Using Large K-Steps.

Rubén Langarita, Adrià Armejach, Javier Setoain, Pablo Ibáñez-Marín, Jesús Alastruey-Benedé, Miquel Moretó

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

2020

The gem5 Simulator: Version 20.0+.

Jason Lowe-Power, Abdul Mutaal Ahmad, Ayaz Akram, Mohammad Alian, Rico Amslinger, Matteo Andreozzi, Adrià Armejach, Nils Asmussen, Srikant Bharadwaj, Gabe Black, Gedare Bloom, Bobby R. Bruce, Daniel Rodrigues Carvalho, Jerónimo Castrillón, Lizhong Chen, Nicolas Derumigny, Stephan Diestelhorst, Wendy Elsasser, Marjan Fariborz, Amin Farmahini Farahani, Pouya Fotouhi, Ryan Gambord, Jayneel Gandhi, Dibakar Gope, Thomas Grass, Bagus Hanindhito, Andreas Hansson, Swapnil Haria, Austin Harris, Timothy Hayes, Adrian Herrera, Matthew Horsnell, Syed Ali Raza Jafri, Radhika Jagtap, Hanhwi Jang, Reiley Jeyapaul, Timothy M. Jones, Matthias Jung, Subash Kannoth, Hamidreza Khaleghzadeh, Yuetsu Kodama, Tushar Krishna, Tommaso Marinelli, Christian Menard, Andrea Mondelli, Tiago Mück, Omar Naji, Krishnendra Nathella, Hoa Nguyen, Nikos Nikoleris, Lena E. Olson, Marc S. Orr, Binh Pham, Pablo Prieto, Trivikram Reddy, Alec Roelke, Mahyar Samani, Andreas Sandberg, Javier Setoain, Boris Shingarov, Matthew D. Sinclair, Tuan Ta, Rahul Thakur, Giacomo Travaglini, Michael Upton, Nilay Vaish, Ilias Vougioukas, Zhengrong Wang, Norbert Wehn, Christian Weis, David A. Wood, Hongil Yoon, Éder F. Zulian

CoRR, 2020

2018

Simulating SVE-Optimised Genomics Workloads on Gem5.

Javier Setoain, Alejandro Chacón, Filippo Spiga

Proceedings of the IEEE International Conference on Cluster Computing, 2018

2017

M2DC - Modular Microserver DataCentre with heterogeneous hardware.

Ariel Oleksiak, Michal Kierzynka, Wojciech Piatek, Giovanni Agosta, Alessandro Barenghi, Carlo Brandolese, William Fornaciari, Gerardo Pelosi, Mariano Cecowski, Robert Plestenjak, Justin Cinkelj, Mario Porrmann, Jens Hagemeyer, René Griessl, Jan Lachmair, Meysam Peykanu, Lennart Tigges, Micha vor dem Berge, Wolfgang Christmann, Stefan Krupop, Alexandre Carbon, Loïc Cudennec, Thierry Goubier, Jean-Marc Philippe, Sven Rosinger, Daniel Schlitt, Christian Pieper, Chris Adeniyi-Jones, Javier Setoain, Luca Ceva, Udo Janssen

Microprocess. Microsystems, 2017

2015

NFFinder: an online bioinformatics tool for searching similar transcriptomics experiments in the context of drug repositioning.

Javier Setoain, Mònica Franch, Marta Martínez, Daniel Tabas-Madrid, Carlos Oscar Sánchez Sorzano, Annette Bakker, Eduardo Gonzalez-Couto, Juan Elvira, Alberto D. Pascual-Montano

Nucleic Acids Res., 2015

NMF-mGPU: non-negative matrix factorization on multi-GPU systems.

Edgardo Mejía-Roa, Daniel Tabas-Madrid, Javier Setoain, Carlos García, Francisco Tirado, Alberto D. Pascual-Montano

BMC Bioinform., 2015

MEPSA: minimum energy pathway analysis for energy landscapes.

Iñigo Marcos-Alcalde, Javier Setoain, Jesús I. Mendieta-Moreno, Jesús Mendieta, Paulino Gómez-Puertas

Bioinform., 2015

2010

Improving face recognition by combination of natural and Gabor faces.

Christian Tenllado, José Ignacio Gómez, Javier Setoain, Darío Mora, Manuel Prieto

Pattern Recognit. Lett., 2010

2009

Identifying the structures involved in seizure generation using sequential analysis of ictal-fMRI data.

Antonio Donaire, Núria Bargalló, Carlos Falcón, Iratxe Maestro, Mar Carreno, Javier Setoain, Jordi Rumià, Santiago Fernández, Luis Pintor, Teresa Boget

NeuroImage, 2009

Endmember Extraction from Hyperspectral Imagery using a Parallel Ensemble Approach with Consensus Analysis.

Fermin Ayuso, Javier Setoain, Manuel Prieto, Christian Tenllado, Francisco Tirado, Javier Plaza, Antonio Plaza

Proceedings of the IEEE International Geoscience & Remote Sensing Symposium, 2009

2008

Parallel Implementation of the 2D Discrete Wavelet Transform on Graphics Processing Units: Filter Bank versus Lifting.

Christian Tenllado, Javier Setoain, Manuel Prieto, Luis Piñuel, Francisco Tirado

IEEE Trans. Parallel Distributed Syst., 2008

GPU for Parallel On-Board Hyperspectral Image Processing.

Javier Setoain, Manuel Prieto, Christian Tenllado, Francisco Tirado

Int. J. High Perform. Comput. Appl., 2008

2007

Parallel Morphological Endmember Extraction Using Commodity Graphics Hardware.

Javier Setoain, Manuel Prieto, Christian Tenllado, Antonio Plaza, Francisco Tirado

IEEE Geosci. Remote. Sens. Lett., 2007

2006

Enhancing the Performance of Multigrid Smoothers in Simultaneous Multithreading Architectures.

Carlos García, Manuel Prieto, Javier Setoain, Francisco Tirado

Proceedings of the High Performance Computing for Computational Science, 2006

Parallel Hyperspectral Image Processing on Commodity Graphics Hardware.

Javier Setoain, Christian Tenllado, Manuel Prieto, David Valencia, Antonio Plaza, Javier Plaza

Proceedings of the 2006 International Conference on Parallel Processing Workshops (ICPP Workshops 2006), 2006