Jared Wilkening

According to our database, Jared Wilkening authored at least 9 papers between 2008 and 2015.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2015

A RESTful API for Accessing Microbial Community Data for MG-RAST.

Andreas Wilke, Jared Bischof, Travis Harrison, Tom Brettin, Mark D'Souza, Wolfgang Gerlach, Hunter Matthews, Tobias Paczian, Jared Wilkening, Elizabeth M. Glass, Narayan Desai, Folker Meyer

PLoS Comput. Biol., 2015

Shock: Active Storage for Multicloud Streaming Data Analysis.

Andreas Wilke, Wolfgang Gerlach, Travis Harrison, Tobias Paczian, Wei Tang, William L. Trimble, Jared Wilkening, Narayan Desai, Folker Meyer

Proceedings of the 2nd IEEE/ACM International Symposium on Big Data Computing, 2015

2013

A scalable data analysis platform for metagenomics.

Wei Tang, Jared Wilkening, Narayan Desai, Wolfgang Gerlach, Andreas Wilke, Folker Meyer

Proceedings of the 2013 IEEE International Conference on Big Data (IEEE BigData 2013), 2013

2012

A Platform-Independent Method for Detecting Errors in Metagenomic Sequencing Data: DRISEE.

Kevin P. Keegan, William L. Trimble, Jared Wilkening, Andreas Wilke, Travis Harrison, Mark D'Souza, Folker Meyer

PLoS Comput. Biol., 2012

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools.

Andreas Wilke, Travis Harrison, Jared Wilkening, Dawn Field, Elizabeth M. Glass, Nikos Kyrpides, Konstantinos Mavrommatis, Folker Meyer

BMC Bioinform., 2012

Short-read reading-frame predictors are not created equal: sequence error causes loss of signal.

William L. Trimble, Kevin P. Keegan, Mark D'Souza, Andreas Wilke, Jared Wilkening, Jack A. Gilbert, Folker Meyer

BMC Bioinform., 2012

2011

An experience report: porting the MG-RAST rapid metagenomics analysis pipeline to the cloud.

Andreas Wilke, Jared Wilkening, Elizabeth M. Glass, Narayan Desai, Folker Meyer

Concurr. Comput. Pract. Exp., 2011

2009

Using clouds for metagenomics: A case study.

Jared Wilkening, Andreas Wilke, Narayan Desai, Folker Meyer

Proceedings of the 2009 IEEE International Conference on Cluster Computing, August 31, 2009

2008

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes.

Folker Meyer, Daniel Paarmann, Mark D'Souza, Robert Olson, Elizabeth M. Glass, Michael Kubal, Tobias Paczian, Alexis A. Rodriguez, Rick Stevens, Andreas Wilke, Jared Wilkening, Robert A. Edwards

BMC Bioinform., 2008