Jan Hoinka

According to our database, Jan Hoinka authored at least 8 papers between 2012 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2020

Embedding gene sets in low-dimensional space.

Jan Hoinka, Teresa M. Przytycka

Nat. Mach. Intell., 2020

AptaBlocks Online: A Web-Based Toolkit for the In Silico Design of Oligonucleotide Sticky Bridges.

Jan Hoinka, Yijie Wang, Teresa M. Przytycka

J. Comput. Biol., 2020

2019

Accurate Sub-population Detection and Mapping Across Single Cell Experiments with PopCorn.

Yijie Wang, Jan Hoinka, Teresa M. Przytycka

Proceedings of the Research in Computational Molecular Biology, 2019

2018

AptaBlocks: Accelerating the Design of RNA-Based Drug Delivery Systems.

Yijie Wang, Jan Hoinka, Piotr Swiderski, Teresa M. Przytycka

Proceedings of the Research in Computational Molecular Biology, 2018

2016

Aptamers in the age of big data: development and application of algorithmic solutions in the field of high-throughput systematic evolution of ligands by exponental enrichment

Jan Hoinka

PhD thesis, 2016

AptaTRACE: Elucidating Sequence-Structure Binding Motifs by Uncovering Selection Trends in HT-SELEX Experiments.

Phuong Dao, Jan Hoinka, Yijie Wang, Mayumi Takahashi, Jiehua Zhou, Fabrizio Costa, John Rossi, John Burnett, Rolf Backofen, Teresa M. Przytycka

Proceedings of the Research in Computational Molecular Biology - 20th Annual Conference, 2016

2014

AptaCluster - A Method to Cluster HT-SELEX Aptamer Pools and Lessons from Its Application.

Jan Hoinka, Alexey Berezhnoy, Zuben E. Sauna, Eli Gilboa, Teresa M. Przytycka

Proceedings of the Research in Computational Molecular Biology, 2014

2012

Identification of sequence-structure RNA binding motifs for SELEX-derived aptamers.

Jan Hoinka, Elena Zotenko, Adam Friedman, Zuben E. Sauna, Teresa M. Przytycka

Bioinform., 2012