Jan G. Bjaalie

According to our database, Jan G. Bjaalie authored at least 25 papers between 2003 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

The Locare workflow: representing neuroscience data locations as geometric objects in 3D brain atlases.

Camilla H. Blixhavn, Ingrid Reiten, Heidi Kleven, Martin Øvsthus, Sharon C. Yates, Ulrike Schlegel, Maja A. Puchades, Oliver Schmid, Jan G. Bjaalie, Ingvild Elise Bjerke, Trygve B. Leergaard

Frontiers Neuroinformatics, 2024

2023

A neuroscientist's guide to using murine brain atlases for efficient analysis and transparent reporting.

Heidi Kleven, Ingrid Reiten, Camilla H. Blixhavn, Ulrike Schlegel, Martin Øvsthus, Eszter A. Papp, Maja A. Puchades, Jan G. Bjaalie, Trygve B. Leergaard, Ingvild Elise Bjerke

Frontiers Neuroinformatics, March, 2023

2022

Correction to: A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility.

Mathew Birdsall Abrams, Jan G. Bjaalie, Samir Das, Gary F. Egan, Satrajit S. Ghosh, Wojtek James Goscinski, Jeffrey S. Grethe, Jeanette Hellgren Kotaleski, Eric Tatt Wei Ho, David N. Kennedy, Linda J. Lanyon, Trygve B. Leergaard, Helen S. Mayberg, Luciano Milanesi, Roman Moucek, Jean-Baptiste Poline, Prasun Roy, Stephen C. Strother, Tong Boon Tang, Paul H. E. Tiesinga, Thomas Wachtler, Daniel K. Wójcik, Maryann E. Martone

Neuroinformatics, 2022

A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility.

Mathew Birdsall Abrams, Jan G. Bjaalie, Samir Das, Gary F. Egan, Satrajit S. Ghosh, Wojtek James Goscinski, Jeffrey S. Grethe, Jeanette Hellgren Kotaleski, Eric Tatt Wei Ho, David N. Kennedy, Linda J. Lanyon, Trygve B. Leergaard, Helen S. Mayberg, Luciano Milanesi, Roman Moucek, Jean-Baptiste Poline, Prasun Roy, Stephen C. Strother, Tong Boon Tang, Paul H. E. Tiesinga, Thomas Wachtler, Daniel K. Wójcik, Maryann E. Martone

Neuroinformatics, 2022

Brain simulation as a cloud service: The Virtual Brain on EBRAINS.

Michael Schirner, Lia Domide, Dionysios Perdikis, Paul Triebkorn, Leon Stefanovski, Roopa Pai, Paula Prodan, Bogdan Valean, Jessica Palmer, Chloê Langford, André Blickensdörfer, Michiel van der Vlag, Sandra Diaz-Pier, Alexander Peyser, Wouter Klijn, Dirk Pleiter, Anne Nahm, Oliver Schmid, Michael Marmaduke Woodman, Lyuba Zehl, Jan Fousek, Spase Petkoski, Lionel Kusch, Meysam Hashemi, Daniele Marinazzo, Jean-François Mangin, Agnes Flöel, Simisola Akintoye, Bernd Carsten Stahl, Michael Cepic, Emily Johnson, Gustavo Deco, Anthony R. McIntosh, Claus C. Hilgetag, Marc Morgan, Bernd Schuller, Alex Upton, Colin McMurtrie, Timo Dickscheid, Jan G. Bjaalie, Katrin Amunts, Jochen Mersmann, Viktor K. Jirsa, Petra Ritter

NeuroImage, 2022

Recommendations for repositories and scientific gateways from a neuroscience perspective.

Malin Sandström, Mathew Birdsall Abrams, Jan G. Bjaalie, Mona Hicks, David N. Kennedy, Arvind Kumar, Jean-Baptiste Poline, Prasun Roy, Paul H. E. Tiesinga, Thomas Wachtler, Wojtek Goscinski

CoRR, 2022

2021

Editorial: APPNING: Animal Population Imaging.

Michel Dojat, Jan G. Bjaalie, Emmanuel Luc Barbier

Frontiers Neuroinformatics, 2021

Brain Modelling as a Service: The Virtual Brain on EBRAINS.

Michael Schirner, Lia Domide, Dionysios Perdikis, Paul Triebkorn, Leon Stefanovski, Roopa Pai, Paula Popa, Bogdan Valean, Jessica Palmer, Chloê Langford, André Blickensdörfer, Michiel van der Vlag, Sandra Diaz-Pier, Alexander Peyser, Wouter Klijn, Dirk Pleiter, Anne Nahm, Oliver Schmid, Michael Marmaduke Woodman, Lyuba Zehl, Jan Fousek, Spase Petkoski, Lionel Kusch, Meysam Hashemi, Daniele Marinazzo, Jean-François Mangin, Agnes Flöel, Simisola Akintoye, Bernd Carsten Stahl, Michael Cepic, Emily Johnson, Anthony R. McIntosh, Claus C. Hilgetag, Marc Morgan, Bernd Schuller, Alex Upton, Colin McMurtrie, Timo Dickscheid, Jan G. Bjaalie, Katrin Amunts, Jochen Mersmann, Viktor K. Jirsa, Petra Ritter

CoRR, 2021

2020

Nutil: A Pre- and Post-processing Toolbox for Histological Rodent Brain Section Images.

Nicolaas E. Groeneboom, Sharon C. Yates, Maja A. Puchades, Jan G. Bjaalie

Frontiers Neuroinformatics, 2020

2019

QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain.

Sharon C. Yates, Nicolaas E. Groeneboom, Christopher Coello, Stefan F. Lichtenthaler, Peer-Hendrik Kuhn, Hans-Ulrich Demuth, Maike Hartlage-Rübsamen, Steffen Roßner, Trygve B. Leergaard, Anna Kreshuk, Maja A. Puchades, Jan G. Bjaalie

Frontiers Neuroinformatics, 2019

2016

Brain-Wide Mapping of Axonal Connections: Workflow for Automated Detection and Spatial Analysis of Labeling in Microscopic Sections.

Eszter A. Papp, Trygve B. Leergaard, Gergely Csúcs, Jan G. Bjaalie

Frontiers Neuroinformatics, 2016

2015

Addendum to "Waxholm Space atlas of the Sprague Dawley rat brain" [NeuroImage 97 (2014) 374-386].

Eszter A. Papp, Trygve B. Leergaard, Evan Calabrese, G. Allan Johnson, Jan G. Bjaalie

NeuroImage, 2015

Waxholm Space atlas of the rat brain hippocampal region: Three-dimensional delineations based on magnetic resonance and diffusion tensor imaging.

Lisa J. Kjonigsen, Sveinung Lillehaug, Jan G. Bjaalie, Menno P. Witter, Trygve B. Leergaard

NeuroImage, 2015

2014

Waxholm Space atlas of the Sprague Dawley rat brain.

Eszter A. Papp, Trygve B. Leergaard, Evan Calabrese, G. Allan Johnson, Jan G. Bjaalie

NeuroImage, 2014

Interoperable atlases of the human brain.

Katrin Amunts, Michael Hawrylycz, David C. Van Essen, John D. Van Horn, Noam Harel, Jean-Baptiste Poline, Federico De Martino, Jan G. Bjaalie, Ghislaine Dehaene-Lambertz, Stanislas Dehaene, Pedro A. Valdés-Sosa, Bertrand Thirion, Karl Zilles, Sean L. Hill, Mathew Birdsall Abrams, Peter A. Tass, Wim Vanduffel, Alan C. Evans, Simon B. Eickhoff

NeuroImage, 2014

Brain-wide map of efferent projections from rat barrel cortex.

Izabela M. Zakiewicz, Jan G. Bjaalie, Trygve B. Leergaard

Frontiers Neuroinformatics, 2014

2011

Atlas of transgenic Tet-Off Ca²⁺/calmodulin-dependent protein kinase II and prion protein promoter activity in the mouse brain.

Francis Odeh, Trygve B. Leergaard, Jana Boy, Thorsten Schmidt, Olaf Riess, Jan G. Bjaalie

NeuroImage, 2011

Digital Atlas of Anatomical Subdivisions and Boundaries of the Rat Hippocampal Region.

Lisa J. Kjonigsen, Trygve B. Leergaard, Menno Witter, Jan G. Bjaalie

Frontiers Neuroinformatics, 2011

2008

Neuroinformatics: Databases, tools, and computational modeling for studying the nervous system.

Jan G. Bjaalie, Sten Grillner, Shiro Usui

Neural Networks, 2008

2007

Toward a workbench for rodent brain image data systems architecture and design.

Ivar A. Moene, Shankar Subramaniam, Dmitri Darine, Trygve B. Leergaard, Jan G. Bjaalie

Neuroinformatics, 2007

Three-dimensional atlas system for mouse and rat brain imaging data.

Trine Hjornevik, Trygve B. Leergaard, Dmitri Darine, Olve Moldestad, Anders M. Dale, Frode Willoch, Jan G. Bjaalie

Frontiers Neuroinformatics, 2007

Surface Modelling of Neuronal Populations and Brain Structures: Use of Implicitly Represented Geometries.

Jens Olav Nygaard, Jan G. Bjaalie, Simen Gaure, Christian Pettersen, Helge Avlesen

Proceedings of the Geometric Modelling, Numerical Simulation, and Optimization, 2007

2006

Expression mapping of tetracycline-responsive prion protein promoter: Digital atlasing for generating cell-specific disease models.

Jana Boy, Trygve B. Leergaard, Thorsten Schmidt, Francis Odeh, Ulrike Bichelmeier, Silke Nuber, Carsten Holzmann, Andreas Wree, Stanley B. Prusiner, Hermann Bujard, Olaf Riess, Jan G. Bjaalie

NeuroImage, 2006

2003

Neuroscience data and tool sharing - A legal and policy framework for neuroinformatics.

Peter Eckersley, Gary F. Egan, Erik De Schutter, Yiyuan Tang, Mirko Novak, Václav Sebesta, Line Matthiessen, Iiro P. Jääskeläinen, Ulla Ruotsalainen, Andreas V. M. Herz, K. Peter Hoffmann, Raphael Ritz, Viji Ravindranath, Francesco Beltrame, Shun-ichi Amari, Shiro Usui, Soo-Young Lee, Jaap van Pelt, Jan G. Bjaalie, Andrzej Wróbel, Fernando Mira da Silva, Carmen González, Sten Grillner, Paul F. M. J. Verschure, Turgay Dalkara, Robert Bennett, David Willshaw, Stephen H. Koslow, Perry L. Miller, Shankar Subramaniam, Arthur W. Toga

Neuroinformatics, 2003

In vivo tracing of major rat brain pathways using manganese-enhanced magnetic resonance imaging and three-dimensional digital atlasing.

Trygve B. Leergaard, Jan G. Bjaalie, Anna Devor, Lawrence L. Wald, Anders M. Dale

NeuroImage, 2003