Jan Deprest

According to our database, Jan Deprest authored at least 80 papers between 2015 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Autonomous Robotic Ultrasound Approach for Fetoscope Tracking by Fusing Optical and 2D Ultrasound Data.

Yuyu Cai, Ruixuan Li, Ayoob Davoodi, Mouloud Ourak, Jan Deprest, Emmanuel B. Vander Poorten

IEEE Robotics Autom. Lett., September, 2024

A Dempster-Shafer Approach to Trustworthy AI With Application to Fetal Brain MRI Segmentation.

Lucas Fidon, Michael Aertsen, Florian Kofler, Andrea Bink, Anna L. David, Thomas Deprest, Doaa Emam, Frédéric Guffens, András Jakab, Gregor Kasprian, Patric Kienast, Andrew Melbourne, Bjoern H. Menze, Nada Mufti, Ivana Pogledic, Daniela Prayer, Marlene Stuempflen, Esther Van Elslander, Sébastien Ourselin, Jan Deprest, Tom Vercauteren

IEEE Trans. Pattern Anal. Mach. Intell., May, 2024

Learning-based keypoint registration for fetoscopic mosaicking.

Alessandro Casella, Sophia Bano, Francisco Vasconcelos, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Sara Moccia, Danail Stoyanov

Int. J. Comput. Assist. Radiol. Surg., March, 2024

Placental vessel segmentation and registration in fetoscopy: Literature review and MICCAI FetReg2021 challenge findings.

Sophia Bano, Alessandro Casella, Francisco Vasconcelos, Abdul Qayyum, Abdesslam Benzinou, Moona Mazher, Fabrice Mériaudeau, Chiara Lena, Ilaria Anita Cintorrino, Gaia Romana De Paolis, Jessica Biagioli, Daria Grechishnikova, Jing Jiao, Bizhe Bai, Yanyan Qiao, Binod Bhattarai, Rebati Raman Gaire, Ronast Subedi, Eduard Vazquez, Szymon Plotka, Aneta Lisowska, Arkadiusz Sitek, George Attilakos, Ruwan Wimalasundera, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Sara Moccia, Danail Stoyanov

Medical Image Anal., February, 2024

Correction to: Robust fetoscopic mosaicking from deep learned flow fields.

Oluwatosin Alabi, Sophia Bano, Francisco Vasconcelos, Anna L. David, Jan Deprest, Danail Stoyanov

Int. J. Comput. Assist. Radiol. Surg., January, 2024

Towards Automated Multi-regional Lung Parcellation for 0.55-3T 3D T2w Fetal MRI.

Alena Uus, Carla Avena Zampieri, Fenella Downes, Alexia Egloff Collado, Megan Hall, Joseph Davidson, Kelly Payette, Jordina Aviles Verdera, Irina Grigorescu, Joseph V. Hajnal, Maria Deprez, Michael Aertsen, Jana Hutter, Mary A. Rutherford, Jan Deprest, Lisa Story

Proceedings of the Perinatal, Preterm and Paediatric Image Analysis, 2024

UltraAugment: Fan-shape and Artifact-based Data Augmentation for 2D Ultrasound Images.

Florian Ramakers, Tom Vercauteren, Jan Deprest, Helena Williams

Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2024

2023

Comparison of 2D and autostereoscopic 3D visualization during mixed reality simulation.

Viktor Vörös, Jef De Smet, Mouloud Ourak, Vladimir Poliakov, Jan Deprest, Tom Kimpe, Emmanuel B. Vander Poorten

Int. J. Comput. Assist. Radiol. Surg., September, 2023

Development and validation of a flexible fetoscope for fetoscopic laser coagulation.

Mirza Awais Ahmad, Mouloud Ourak, Dirk Wenmakers, Ignacio Valenzuela, David Basurto, Sébastien Ourselin, Tom Vercauteren, Jan Deprest, Emmanuel B. Vander Poorten

Int. J. Comput. Assist. Radiol. Surg., September, 2023

Placental vessel-guided hybrid framework for fetoscopic mosaicking.

Sophia Bano, Francisco Vasconcelos, Anna L. David, Jan Deprest, Danail Stoyanov

Comput. methods Biomech. Biomed. Eng. Imaging Vis., July, 2023

Motion and viewing analysis during minimally invasive surgery for autostereoscopic visualization.

Viktor Vörös, Ann-Sophie Page, Jan Deprest, Tom Kimpe, Emmanuel B. Vander Poorten

Int. J. Comput. Assist. Radiol. Surg., March, 2023

DEEPBEAS3D: Deep Learning and B-Spline Explicit Active Surfaces.

Helena Williams, João Pedrosa, Muhammad Asad, Laura Cattani, Tom Vercauteren, Jan Deprest, Jan D'hooge

CoRR, 2023

Adaptive Multi-scale Online Likelihood Network for AI-Assisted Interactive Segmentation.

Muhammad Asad, Helena Williams, Indrajeet Mandal, Sarim Ather, Jan Deprest, Jan D'hooge, Tom Vercauteren

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Development of Robot-assisted Ultrasound System for Fetoscopic Tracking in Twin to Twin Transfusion Syndrome Surgery.

Yuyu Cai, Ayoob Davoodi, Ruixuan Li, Mouloud Ourak, Kenan Niu, Jan Deprest, Emmanuel B. Vander Poorten

Proceedings of the International Symposium on Medical Robotics, 2023

Towards in-utero Navigational Assistance: A Multi Task Neural Network for Segmentation and Pose Estimation in Fetoscopy.

Mirza Awais Ahmad, Mouloud Ourak, Tom Vercauteren, Jan Deprest, Emmanuel B. Vander Poorten

Proceedings of the International Symposium on Medical Robotics, 2023

2022

Concentric Dual-Chamber Pneumatic Artificial Muscles: Miniature Actuators Designed for Use in Minimally Invasive Surgical Instruments.

Robert Lathrop, Mouloud Ourak, Jan Deprest, Emmanuel B. Vander Poorten

J. Medical Robotics Res., 2022

Robotic Endoscope Control Via Autonomous Instrument Tracking.

Caspar Gruijthuijsen, Luis C. García-Peraza-Herrera, Gianni Borghesan, Dominiek Reynaerts, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Emmanuel B. Vander Poorten

Frontiers Robotics AI, 2022

FetReg2021: A Challenge on Placental Vessel Segmentation and Registration in Fetoscopy.

Sophia Bano, Alessandro Casella, Francisco Vasconcelos, Abdul Qayyum, Abdesslam Benzinou, Moona Mazher, Fabrice Mériaudeau, Chiara Lena, Ilaria Anita Cintorrino, Gaia Romana De Paolis, Jessica Biagioli, Daria Grechishnikova, Jing Jiao, Bizhe Bai, Yanyan Qiao, Binod Bhattarai, Rebati Raman Gaire, Ronast Subedi, Eduard Vazquez, Szymon Plotka, Aneta Lisowska, Arkadiusz Sitek, George Attilakos, Ruwan Wimalasundera, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Sara Moccia, Danail Stoyanov

CoRR, 2022

Large-scale surgical workflow segmentation for laparoscopic sacrocolpopexy.

Yitong Zhang, Sophia Bano, Ann-Sophie Page, Jan Deprest, Danail Stoyanov, Francisco Vasconcelos

Int. J. Comput. Assist. Radiol. Surg., 2022

Robust fetoscopic mosaicking from deep learned flow fields.

Oluwatosin Alabi, Sophia Bano, Francisco Vasconcelos, Anna L. David, Jan Deprest, Danail Stoyanov

Int. J. Comput. Assist. Radiol. Surg., 2022

Retrieval of Surgical Phase Transitions Using Reinforcement Learning.

Yitong Zhang, Sophia Bano, Ann-Sophie Page, Jan Deprest, Danail Stoyanov, Francisco Vasconcelos

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

2021

Globally Optimal Fetoscopic Mosaicking Based on Pose Graph Optimisation With Affine Constraints.

Liang Li, Sophia Bano, Jan Deprest, Anna L. David, Danail Stoyanov, Francisco Vasconcelos

IEEE Robotics Autom. Lett., October, 2021

CA-Net: Comprehensive Attention Convolutional Neural Networks for Explainable Medical Image Segmentation.

Ran Gu, Guotai Wang, Tao Song, Rui Huang, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Shaoting Zhang

IEEE Trans. Medical Imaging, 2021

MIDeepSeg: Minimally interactive segmentation of unseen objects from medical images using deep learning.

Xiangde Luo, Guotai Wang, Tao Song, Jingyang Zhang, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Shaoting Zhang

Medical Image Anal., 2021

Partial supervision for the FeTA challenge 2021.

Lucas Fidon, Michael Aertsen, Suprosanna Shit, Philippe Demaerel, Sébastien Ourselin, Jan Deprest, Tom Vercauteren

CoRR, 2021

Autonomous Robotic Endoscope Control based on Semantically Rich Instructions.

Caspar Gruijthuijsen, Luis C. García-Peraza-Herrera, Gianni Borghesan, Dominiek Reynaerts, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Emmanuel B. Vander Poorten

CoRR, 2021

FetReg: Placental Vessel Segmentation and Registration in Fetoscopy Challenge Dataset.

Sophia Bano, Alessandro Casella, Francisco Vasconcelos, Sara Moccia, George Attilakos, Ruwan Wimalasundera, Anna L. David, Dario Paladini, Jan Deprest, Elena De Momi, Leonardo S. Mattos, Danail Stoyanov

CoRR, 2021

Interactive Segmentation via Deep Learning and B-Spline Explicit Active Surfaces.

Helena Williams, João Pedrosa, Laura Cattani, Susanne Housmans, Tom Vercauteren, Jan Deprest, Jan D'hooge

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Automatic Tomographic Ultrasound Imaging Sequence Extraction of the Anal Sphincter.

Helena Williams, Laura Cattani, Tom Vercauteren, Jan Deprest, Jan D'hooge

Proceedings of the Simplifying Medical Ultrasound - Second International Workshop, 2021

Distributionally Robust Segmentation of Abnormal Fetal Brain 3D MRI.

Lucas Fidon, Michael Aertsen, Nada Mufti, Thomas Deprest, Doaa Emam, Frédéric Guffens, Ernst Schwartz, Michael Ebner, Daniela Prayer, Gregor Kasprian, Anna L. David, Andrew Melbourne, Sébastien Ourselin, Jan Deprest, Georg Langs, Tom Vercauteren

Proceedings of the Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, and Perinatal Imaging, Placental and Preterm Image Analysis, 2021

Label-Set Loss Functions for Partial Supervision: Application to Fetal Brain 3D MRI Parcellation.

Lucas Fidon, Michael Aertsen, Doaa Emam, Nada Mufti, Frédéric Guffens, Thomas Deprest, Philippe Demaerel, Anna L. David, Andrew Melbourne, Sébastien Ourselin, Jan Deprest, Tom Vercauteren

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Design and Characterization of a Miniature Dual-chamber Pneumatic Actuator for Minimally Invasive Surgical Devices.

Robert Lathrop, Mouloud Ourak, Francesca Russo, Jan Deprest, Emmanuel B. Vander Poorten

Proceedings of the International Symposium on Medical Robotics, 2021

2020

An automated framework for localization, segmentation and super-resolution reconstruction of fetal brain MRI.

Michael Ebner, Guotai Wang, Wenqi Li, Michael Aertsen, Premal A. Patel, Rosalind Aughwane, Andrew Melbourne, Tom Doel, Steven Dymarkowski, Paolo De Coppi, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren

NeuroImage, 2020

Active Annotation of Informative Overlapping Frames in Video Mosaicking Applications.

Loïc Peter, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, Jan Deprest, Sébastien Ourselin, Juan Eugenio Iglesias, Tom Vercauteren

CoRR, 2020

Deep learning-based fetoscopic mosaicking for field-of-view expansion.

Sophia Bano, Francisco Vasconcelos, Marcel Tella-Amo, George Dwyer, Caspar Gruijthuijsen, Emmanuel B. Vander Poorten, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Danail Stoyanov

Int. J. Comput. Assist. Radiol. Surg., 2020

FetNet: a recurrent convolutional network for occlusion identification in fetoscopic videos.

Sophia Bano, Francisco Vasconcelos, Emmanuel B. Vander Poorten, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Danail Stoyanov

Int. J. Comput. Assist. Radiol. Surg., 2020

Deep learning-based monocular placental pose estimation: towards collaborative robotics in fetoscopy.

Mirza Awais Ahmad, Mouloud Ourak, Caspar Gruijthuijsen, Jan Deprest, Tom Vercauteren, Emmanuel B. Vander Poorten

Int. J. Comput. Assist. Radiol. Surg., 2020

Automatic C-Plane Detection in Pelvic Floor Transperineal Volumetric Ultrasound.

Helena Williams, Laura Cattani, Mohammad Yaqub, Carole H. Sudre, Tom Vercauteren, Jan Deprest, Jan D'hooge

Proceedings of the Medical Ultrasound, and Preterm, Perinatal and Paediatric Image Analysis, 2020

Uncertainty-Guided Efficient Interactive Refinement of Fetal Brain Segmentation from Stacks of MRI Slices.

Guotai Wang, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren, Shaoting Zhang

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Deep Placental Vessel Segmentation for Fetoscopic Mosaicking.

Sophia Bano, Francisco Vasconcelos, Luke M. Shepherd, Emmanuel B. Vander Poorten, Tom Vercauteren, Sébastien Ourselin, Anna L. David, Jan Deprest, Danail Stoyanov

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Active Handheld Flexible Fetoscope-Design and Control Based on a Modified Generalized Prandtl-Ishlinski Model.

Julie Legrand, Dries Dirckx, Maarten Durt, Mouloud Ourak, Jan Deprest, Sébastien Ourselin, Jun Qian, Tom Vercauteren, Emmanuel B. Vander Poorten

Proceedings of the IEEE/ASME International Conference on Advanced Intelligent Mechatronics, 2020

2019

Evaluation of Haptic Feedback on Bimanually Teleoperated Laparoscopy for Endometriosis Surgery.

Sergio Portolés Diez, Gianni Borghesan, Luc Joyeux, Christel Meuleman, Jan Deprest, Danail Stoyanov, Sébastien Ourselin, Tom Vercauteren, Dominiek Reynaerts, Emmanuel B. Vander Poorten

IEEE Trans. Biomed. Eng., 2019

DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation.

Guotai Wang, Maria A. Zuluaga, Wenqi Li, Rosalind Pratt, Premal A. Patel, Michael Aertsen, Tom Doel, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren

IEEE Trans. Pattern Anal. Mach. Intell., 2019

In Vivo Force Sensing During Laparoscopic Sacrocolpopexy Vaginal Vault Manipulation.

Jef De Smet, Jan Deprest, Emmanuel B. Vander Poorten

J. Medical Robotics Res., 2019

Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks.

Guotai Wang, Wenqi Li, Michael Aertsen, Jan Deprest, Sébastien Ourselin, Tom Vercauteren

Neurocomputing, 2019

Handheld Active Add-On Control Unit for a Cable-Driven Flexible Endoscope.

Julie Legrand, Allan Javaux, Mouloud Ourak, Dirk Wenmakers, Tom Vercauteren, Jan Deprest, Sébastien Ourselin, Kathleen Denis, Emmanuel B. Vander Poorten

Frontiers Robotics AI, 2019

Deep Sequential Mosaicking of Fetoscopic Videos.

Sophia Bano, Francisco Vasconcelos, Marcel Tella-Amo, George Dwyer, Caspar Gruijthuijsen, Jan Deprest, Sébastien Ourselin, Emmanuel B. Vander Poorten, Tom Vercauteren, Danail Stoyanov

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Macro-Micro Multi-Arm Robot for Single-Port Access Surgery.

T. Vandebroek, Mouloud Ourak, Caspar Gruijthuijsen, Allan Javaux, Julie Legrand, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Emmanuel B. Vander Poorten

Proceedings of the 2019 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2019

Robotic Control of a Multi-Modal Rigid Endoscope Combining Optical Imaging with All-Optical Ultrasound.

George Dwyer, Richard J. Colchester, Erwin J. Alles, Efthymios Maneas, Sébastien Ourselin, Tom Vercauteren, Jan Deprest, Emmanuel B. Vander Poorten, Paolo De Coppi, Adrien E. Desjardins, Danail Stoyanov

Proceedings of the International Conference on Robotics and Automation, 2019

Evaluating the Potential Benefit of Autostereoscopy in Laparoscopic Sacrocolpopexy through VR Simulation.

Jef De Smet, Emmanuel B. Vander Poorten, Vladimir Poliakov, Kenan Niu, Frédérique Chesterman, Johan Fornier, Mirza Awais Ahmad, Mouloud Ourak, Viktor Vörös, Jan Deprest

Proceedings of the 19th International Conference on Advanced Robotics, 2019

Design and Shared Control of a Flexible Endoscope with Autonomous Distal Tip Alignment.

Mirza Awais Ahmad, Mouloud Ourak, Caspar Gruijthuijsen, Julie Legrand, Tom Vercauteren, Jan Deprest, Sébastien Ourselin, Emmanuel B. Vander Poorten

Proceedings of the 19th International Conference on Advanced Robotics, 2019

2018

In-vivo Force Sensing during Laparoscopic Sacrocolpopexy Vaginal Vault Manipulation.

Jef De Smet, Jan Deprest, A. Thys, Emmanuel B. Vander Poorten

Dataset, November, 2018

Interactive Medical Image Segmentation Using Deep Learning With Image-Specific Fine Tuning.

Guotai Wang, Wenqi Li, Maria A. Zuluaga, Rosalind Pratt, Premal A. Patel, Michael Aertsen, Tom Doel, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren

IEEE Trans. Medical Imaging, 2018

From a Disposable Ureteroscope to an Active Lightweight Fetoscope - Characterization and Usability Evaluation.

Julie Legrand, Mouloud Ourak, Allan Javaux, Caspar Gruijthuijsen, Mirza Awais Ahmad, Ben Van Cleynenbreugel, Tom Vercauteren, Jan Deprest, Sébastien Ourselin, Emmanuel B. Vander Poorten

IEEE Robotics Autom. Lett., 2018

A magnetic resonance multi-atlas for the neonatal rabbit brain.

Sebastiano Ferraris, Johannes L. van der Merwe, Lennart Van Der Veeken, Ferran Prados, Juan Eugenio Iglesias, Andrew Melbourne, Marco Lorenzi, Marc Modat, Willy Gsell, Jan Deprest, Tom Vercauteren

NeuroImage, 2018

Haptic Guidance Based on All-Optical Ultrasound Distance Sensing for Safer Minimally Invasive Fetal Surgery.

Caspar Gruijthuijsen, Richard J. Colchester, Alain Devreker, Allan Javaux, Efthymios Maneas, Sacha Noimark, Wenfeng Xia, Danail Stoyanov, Dominiek Reynaerts, Jan Deprest, Sébastien Ourselin, Adrien E. Desjardins, Tom Vercauteren, Emmanuel B. Vander Poorten

J. Medical Robotics Res., 2018

Towards computer-assisted TTTS: Laser ablation detection for workflow segmentation from fetoscopic video.

Francisco Vasconcelos, Patrick Brandao, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Donald Peebles, Danail Stoyanov

Int. J. Comput. Assist. Radiol. Surg., 2018

Retrieval and registration of long-range overlapping frames for scalable mosaicking of in vivo fetoscopy.

Loïc Peter, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, George Attilakos, Ruwan Wimalasundera, Jan Deprest, Sébastien Ourselin, Tom Vercauteren

Int. J. Comput. Assist. Radiol. Surg., 2018

A mixed-reality surgical trainer with comprehensive sensing for fetal laser minimally invasive surgery.

Allan Javaux, David Bouget, Caspar Gruijthuijsen, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin, Jan Deprest, Kathleen Denis, Emmanuel B. Vander Poorten

Int. J. Comput. Assist. Radiol. Surg., 2018

A log-Euclidean and total variation based variational framework for computational sonography.

Jyotirmoy Banerjee, Premal A. Patel, Fred Ushakov, Donald Peebles, Jan Deprest, Sébastien Ourselin, David J. Hawkes, Tom Vercauteren

Proceedings of the Medical Imaging 2018: Image Processing, 2018

Technical note: probabilistic visual and electromagnetic data fusion for robust drift-free sequential mosaicking. Application to fetoscopy.

Marcel Tella-Amo, Loïc Peter, Dzhoshkun I. Shakir, Jan Deprest, Danail Stoyanov, Juan Eugenio Iglesias, Tom Vercauteren, Sébastien Ourselin

Proceedings of the Medical Imaging 2018: Image-Guided Procedures, 2018

Technical note: automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network.

Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren

Proceedings of the Medical Imaging 2018: Image-Guided Procedures, 2018

An Automated Localization, Segmentation and Reconstruction Framework for Fetal Brain MRI.

Michael Ebner, Guotai Wang, Wenqi Li, Michael Aertsen, Premal A. Patel, Rosalind Aughwane, Andrew Melbourne, Tom Doel, Anna L. David, Jan Deprest, Sébastien Ourselin, Tom Vercauteren

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

MRI Measurement of Placental Perfusion and Fetal Blood Oxygen Saturation in Normal Pregnancy and Placental Insufficiency.

Rosalind Aughwane, Magdalena J. Sokolska, Alan Bainbridge, David Atkinson, Giles S. Kendall, Jan Deprest, Tom Vercauteren, Anna L. David, Sébastien Ourselin, Andrew Melbourne

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

2017

A Continuum Robot and Control Interface for Surgical Assist in Fetoscopic Interventions.

George Dwyer, François Chadebecq, Marcel Tella-Amo, Christos Bergeles, Efthymios Maneas, Vijay Pawar, Emmanuel B. Vander Poorten, Jan Deprest, Sébastien Ourselin, Paolo De Coppi, Tom Vercauteren, Danail Stoyanov

IEEE Robotics Autom. Lett., 2017

Bruker2nifti: Magnetic Resonance Images converter from Bruker ParaVision to Nifti format.

Sebastiano Ferraris, Dzhoshkun Ismail Shakir, Johannes L. van der Merwe, Willy Gsell, Jan Deprest, Tom Vercauteren

J. Open Source Softw., 2017

Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network.

Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren

CoRR, 2017

GIFT-Cloud: A data sharing and collaboration platform for medical imaging research.

Tom Doel, Dzhoshkun I. Shakir, Rosalind Pratt, Michael Aertsen, James Moggridge, Erwin Bellon, Anna L. David, Jan Deprest, Tom Vercauteren, Sébastien Ourselin

Comput. Methods Programs Biomed., 2017

Template-Free Estimation of Intracranial Volume: A Preterm Birth Animal Model Study.

Juan Eugenio Iglesias, Sebastiano Ferraris, Marc Modat, Willy Gsell, Jan Deprest, Johannes L. van der Merwe, Tom Vercauteren

Proceedings of the Fetal, Infant and Ophthalmic Medical Image Analysis, 2017

Body wall force sensor for simulated minimally invasive surgery: Application to fetal surgery.

Allan Javaux, Laure Esteveny, David Bouget, Caspar Gruijthuijsen, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin, Dominiek Reynaerts, Kathleen Denis, Jan Deprest, Emmanuel B. Vander Poorten

Proceedings of the 2017 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2017

ToolNet: Holistically-nested real-time segmentation of robotic surgical tools.

Luis C. García-Peraza-Herrera, Wenqi Li, Lucas Fidon, Caspar Gruijthuijsen, Alain Devreker, George Attilakos, Jan Deprest, Emmanuel B. Vander Poorten, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin

Proceedings of the 2017 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2017

2016

Slic-Seg: A minimally interactive segmentation of the placenta from sparse and motion-corrupted fetal MRI in multiple views.

Guotai Wang, Maria A. Zuluaga, Rosalind Pratt, Michael Aertsen, Tom Doel, Maria Klusmann, Anna L. David, Jan Deprest, Tom Vercauteren, Sébastien Ourselin

Medical Image Anal., 2016

Real-time mosaicing of fetoscopic videos using SIFT.

Pankaj Daga, François Chadebecq, Dzhoshkun I. Shakir, Luis Carlos García-Peraza-Herrera, Marcel Tella, George Dwyer, Anna L. David, Jan Deprest, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin

Proceedings of the Medical Imaging 2016: Image-Guided Procedures, Robotic Interventions, and Modeling, San Diego, California, United States, 27 February, 2016

Dynamically Balanced Online Random Forests for Interactive Scribble-Based Segmentation.

Guotai Wang, Maria A. Zuluaga, Rosalind Pratt, Michael Aertsen, Tom Doel, Maria Klusmann, Anna L. David, Jan Deprest, Tom Vercauteren, Sébastien Ourselin

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Real-Time Segmentation of Non-rigid Surgical Tools Based on Deep Learning and Tracking.

Luis C. García-Peraza-Herrera, Wenqi Li, Caspar Gruijthuijsen, Alain Devreker, George Attilakos, Jan Deprest, Emmanuel B. Vander Poorten, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin

Proceedings of the Computer-Assisted and Robotic Endoscopy - Third International Workshop, 2016

A Combined EM and Visual Tracking Probabilistic Model for Robust Mosaicking: Application to Fetoscopy.

Marcel Tella-Amo, Pankaj Daga, François Chadebecq, Stephen A. Thompson, Dzhoshkun I. Shakir, George Dwyer, Ruwan Wimalasundera, Jan Deprest, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin

Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2016

2015

Interventional Photoacoustic Imaging of the Human Placenta with Ultrasonic Tracking for Minimally Invasive Fetal Surgeries.

Wenfeng Xia, Efthymios Maneas, Daniil I. Nikitichev, Charles A. Mosse, Gustavo Sato dos Santos, Tom Vercauteren, Anna L. David, Jan Deprest, Sébastien Ourselin, Paul C. Beard, Adrien E. Desjardins

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

Slic-Seg: Slice-by-Slice Segmentation Propagation of the Placenta in Fetal MRI Using One-Plane Scribbles and Online Learning.

Guotai Wang, Maria A. Zuluaga, Rosalind Pratt, Michael Aertsen, Anna L. David, Jan Deprest, Tom Vercauteren, Sébastien Ourselin

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5, 2015

A Registration Approach to Endoscopic Laser Speckle Contrast Imaging for Intrauterine Visualisation of Placental Vessels.

Gustavo Sato dos Santos, Efthymios Maneas, Daniil I. Nikitichev, Anamaria Barburas, Anna L. David, Jan Deprest, Adrien E. Desjardins, Tom Vercauteren, Sébastien Ourselin

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

Fluidic actuation for intra-operative in situ imaging.

Alain Devreker, Benoit Rosa, Adrien E. Desjardins, Erwin J. Alles, Luis C. García-Peraza, Efthymios Maneas, Danail Stoyanov, Anna L. David, Tom Vercauteren, Jan Deprest, Sébastien Ourselin, Dominiek Reynaerts, Emmanuel B. Vander Poorten

Proceedings of the 2015 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2015