Jamie P. McCusker

According to our database, Jamie P. McCusker authored at least 59 papers between 2008 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Customizable Knowledge Graph Visualization using the Whyis Knowledge Explorer.

Jamie P. McCusker

Proceedings of the 9th International Workshop on the Visualization and Interaction for Ontologies, 2024

Supporting Next-Generation Science with a Semantic Ecosystem.

Sabbir M. Rashid, John S. Erickson, Jamie P. McCusker, Henrique Santos, Paulo Pinheiro, Shruthi Chari, Matthew Johnson, Jade S. Franklin, Kelsey Rook, Deborah L. McGuinness

Proceedings of the ISWC 2024 Posters, 2024

ChatBS: An Exploratory Sandbox for Bridging Large Language Models with the Open Web.

John S. Erickson, Henrique Santos, Jamie P. McCusker, Sola Shirai, Deborah L. McGuinness, James A. Hendler

Proceedings of the ISWC 2024 Posters, 2024

2023

Semantically enabling clinical decision support recommendations.

Oshani Seneviratne, Amar K. Das, Shruthi Chari, Nkechinyere N. Agu, Sabbir M. Rashid, Jamie P. McCusker, Jade S. Franklin, Miao Qi, Kristin P. Bennett, Ching-Hua Chen, James A. Hendler, Deborah L. McGuinness

J. Biomed. Semant., December, 2023

LOKE: Linked Open Knowledge Extraction for Automated Knowledge Graph Construction.

Jamie P. McCusker

CoRR, 2023

An Ontology for Reasoning About Fairness in Regression and Machine Learning.

Jade S. Franklin, Hannah Powers, John S. Erickson, Jamie P. McCusker, Deborah L. McGuinness, Kristin P. Bennett

Proceedings of the Knowledge Graphs and Semantic Web, 2023

A Concise Ontology to Support Research on Complex, Multimodal Clinical Reasoning.

Sabbir M. Rashid, Jamie P. McCusker, Daniel M. Gruen, Oshani Seneviratne, Deborah L. McGuinness

Proceedings of the Semantic Web - 20th International Conference, 2023

Whyis 2: An Open Source Framework for Knowledge Graph Development and Research.

Jamie P. McCusker, Deborah L. McGuinness

Proceedings of the Semantic Web - 20th International Conference, 2023

SciKG: Tutorial on Building Scientific Knowledge Graphs from Data, Data Dictionaries, and Codebooks.

Henrique Santos, Paulo Pinheiro, Jamie P. McCusker, Sabbir M. Rashid, Deborah L. McGuinness

Proceedings of the Joint Proceedings of the ESWC 2023 Workshops and Tutorials co-located with 20th European Semantic Web Conference (ESWC 2023), 2023

2022

An Ontology for Fairness Metrics.

Jade S. Franklin, Karan Bhanot, Mohamed F. Ghalwash, Kristin P. Bennett, Jamie P. McCusker, Deborah L. McGuinness

Proceedings of the AIES '22: AAAI/ACM Conference on AI, Ethics, and Society, Oxford, United Kingdom, May 19, 2022

Can Machines Read Coding Manuals Yet? - A Benchmark for Building Better Language Models for Code Understanding.

Ibrahim Abdelaziz, Julian Dolby, Jamie P. McCusker, Kavitha Srinivas

Proceedings of the Thirty-Sixth AAAI Conference on Artificial Intelligence, 2022

2021

Geospatial Reasoning with Shapefiles for Supporting Policy Decisions.

Henrique Santos, Jamie P. McCusker, Deborah L. McGuinness

CoRR, 2021

Creating and Visualizing the Materials Science Knowledge Graph with Whyis.

Jamie P. McCusker, Michael Deagen, Tolulomo Fateye, Anya Wallace, Sabbir M. Rashid, Deborah L. McGuinness

Proceedings of the ISWC 2021 Posters, 2021

A Toolkit for Generating Code Knowledge Graphs.

Ibrahim Abdelaziz, Julian Dolby, Jamie P. McCusker, Kavitha Srinivas

Proceedings of the K-CAP '21: Knowledge Capture Conference, 2021

2020

Graph4Code: A Machine Interpretable Knowledge Graph for Code.

Kavitha Srinivas, Ibrahim Abdelaziz, Julian Dolby, Jamie P. McCusker

CoRR, 2020

The Dynamic Spectrum Access Policy Framework in Action.

Henrique Santos, Alice Mulvehill, John S. Erickson, Jamie P. McCusker, Minor Gordon, Owen Xie, Samuel Stouffer, Gerard Capraro, Alex Pidwerbetsky, John Burgess, Allan Berlinsky, Kurt A. Turck, Jonathan D. Ashdown, Deborah L. McGuinness

Proceedings of the ISWC 2020 Demos and Industry Tracks: From Novel Ideas to Industrial Practice co-located with 19th International Semantic Web Conference (ISWC 2020), 2020

A Semantic Framework for Enabling Radio Spectrum Policy Management and Evaluation.

Henrique Santos, Alice Mulvehill, John S. Erickson, Jamie P. McCusker, Minor Gordon, Owen Xie, Samuel Stouffer, Gerard Capraro, Alex Pidwerbetsky, John Burgess, Allan Berlinsky, Kurt A. Turck, Jonathan D. Ashdown, Deborah L. McGuinness

Proceedings of the Semantic Web - ISWC 2020, 2020

NanoMine: A Knowledge Graph for Nanocomposite Materials Science.

Jamie P. McCusker, Neha Keshan, Sabbir M. Rashid, Michael Deagen, L. Catherine Brinson, Deborah L. McGuinness

Proceedings of the Semantic Web - ISWC 2020, 2020

A Demonstration of CodeBreaker: A Machine Interpretable Knowledge Graph for Code.

Ibrahim Abdelaziz, Kavitha Srinivas, Julian Dolby, Jamie P. McCusker

Proceedings of the ISWC 2020 Demos and Industry Tracks: From Novel Ideas to Industrial Practice co-located with 19th International Semantic Web Conference (ISWC 2020), 2020

Knowledge Extraction of Cohort Characteristics in Research Publications.

Jay D. S. Franklin, Shruthi Chari, Morgan Foreman, Oshani Seneviratne, Daniel M. Gruen, Jamie P. McCusker, Amar K. Das, Deborah L. McGuinness

Proceedings of the AMIA 2020, 2020

2019

Enabling Trust in Clinical Decision Support Recommendations through Semantics.

Oshani Seneviratne, Amar K. Das, Shruthi Chari, Nkechinyere N. Agu, Sabbir M. Rashid, Ching-Hua Chen, Jamie P. McCusker, James A. Hendler, Deborah L. McGuinness

Proceedings of the Workshop on Semantic Web Solutions for Large-Scale Biomedical Data Analytics co-located with 18th International Semantic Web Conference (ISWC 2019), 2019

Automating Population Health Studies Through Semantics and Statistics.

Alexander New, Miao Qi, Shruthi Chari, Sabbir M. Rashid, Oshani Seneviratne, Jamie P. McCusker, John S. Erickson, Deborah L. McGuinness, Kristin P. Bennett

Proceedings of the Joint Proceedings of the International Workshops on Sensors and Actuators on the Web, 2019

Reflections on: Finding Melanoma Drugs Through a Probabilistic Knowledge Graph.

Jamie P. McCusker, Michel Dumontier, Rui Yan, Sylvia He, Jonathan S. Dordick, Deborah L. McGuinness

Proceedings of the Journal Track co-located with the 18th International Semantic Web Conference (ISWC 2019), 2019

A Linked Data Representation for Summary Statistics and Grouping Criteria.

Jamie P. McCusker, Michel Dumontier, Shruthi Chari, Joanne S. Luciano, Deborah L. McGuinness

Proceedings of the Joint Proceedings of the International Workshops on Sensors and Actuators on the Web, 2019

Making Study Populations Visible Through Knowledge Graphs.

Shruthi Chari, Miao Qi, Nkechinyere N. Agu, Oshani Seneviratne, Jamie P. McCusker, Kristin P. Bennett, Amar K. Das, Deborah L. McGuinness

Proceedings of the Semantic Web - ISWC 2019, 2019

Ontology-enabled Analysis of Study Populations.

Shruthi Chari, Miao Qi, Nkechinyere N. Agu, Oshani Seneviratne, Jamie P. McCusker, Kristin P. Bennett, Amar K. Das, Deborah L. McGuinness

Proceedings of the ISWC 2019 Satellite Tracks (Posters & Demonstrations, 2019

G-PROV: Provenance Management for Clinical Practice Guidelines.

Nkechinyere N. Agu, Neha Keshan, Shruthi Chari, Oshani Seneviratne, Jamie P. McCusker, Deborah L. McGuinness

Proceedings of the Workshop on Semantic Web Solutions for Large-Scale Biomedical Data Analytics co-located with 18th International Semantic Web Conference (ISWC 2019), 2019

2018

Ontology-enabled Breast Cancer Characterization.

Oshani Seneviratne, Sabbir M. Rashid, Shruthi Chari, Jamie P. McCusker, Kristin P. Bennett, Jim Hendler, Deborah L. McGuinness

Proceedings of the ISWC 2018 Posters & Demonstrations, Industry and Blue Sky Ideas Tracks co-located with 17th International Semantic Web Conference (ISWC 2018), Monterey, USA, October 8th - to, 2018

Knowledge Integration for Disease Characterization: A Breast Cancer Example.

Oshani Seneviratne, Sabbir M. Rashid, Shruthi Chari, Jamie P. McCusker, Kristin P. Bennett, James A. Hendler, Deborah L. McGuinness

Proceedings of the Semantic Web - ISWC 2018, 2018

The Whyis Knowledge Graph Framework in Action.

Jamie P. McCusker, Sabbir M. Rashid, Nkechinyere Agu, Kristin P. Bennett, Deborah L. McGuinness

Proceedings of the ISWC 2018 Posters & Demonstrations, Industry and Blue Sky Ideas Tracks co-located with 17th International Semantic Web Conference (ISWC 2018), Monterey, USA, October 8th - to, 2018

Developing Scientific Knowledge Graphs Using Whyis.

Jamie P. McCusker, Sabbir M. Rashid, Nkechinyere Agu, Kristin P. Bennett, Deborah L. McGuinness

Proceedings of the Second Workshop on Enabling Open Semantic Science co-located with 17th International Semantic Web Conference, 2018

Annotating Diverse Scientific Data With HAScO.

Paulo Pinheiro, Marcello Peixoto Bax, Henrique Santos, Sabbir M. Rashid, Zhicheng Liang, Yue Liu, Yarden Ne'eman, Jamie P. McCusker, Deborah L. McGuinness

Proceedings of the XI Seminar on Ontology Research in Brazil and II Doctoral and Masters Consortium on Ontologies, 2018

2017

An Ontology for a Polymer Nanocomposite Community Data Resource.

Vipula Rawte, Jamie P. McCusker, He Zhao, L. Catherine Brinson, Wei Chen, Linda Schadler, Deborah L. McGuinness

Proceedings of the 2017 ACM on Web Science Conference, 2017

Broad, Interdisciplinary Science <i>In Tela</i>: An Exposure and Child Health Ontology.

Jamie P. McCusker, Sabbir M. Rashid, Zhicheng Liang, Yue Liu, Katherine Chastain, Paulo Pinheiro, Jeanette A. Stingone, Deborah L. McGuinness

Proceedings of the 2017 ACM on Web Science Conference, 2017

The Semantic Data Dictionary Approach to Data Annotation & Integration.

Sabbir M. Rashid, Katherine Chastain, Jeanette A. Stingone, Deborah L. McGuinness, Jamie P. McCusker

Proceedings of the First Workshop on Enabling Open Semantic Science co-located with 16th International Semantic Web Conference (ISWC 2017), 2017

2016

Finding melanoma drugs through a probabilistic knowledge graph.

Jamie P. McCusker, Michel Dumontier, Rui Yan, Sylvia He, Jonathan S. Dordick, Deborah L. McGuinness

PeerJ Prepr., 2016

2015

Formalizing the semantics of sea ice.

Ruth E. Duerr, Jamie P. McCusker, Mark A. Parsons, Siri Jodha Singh Khalsa, Peter L. Pulsifer, Cassidy Thompson, Rui Yan, Deborah L. McGuinness, Peter Fox

Earth Sci. Informatics, 2015

2014

The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery.

Michel Dumontier, Christopher J. O. Baker, Joachim Baran, Alison Callahan, Leonid L. Chepelev, Jose Cruz-Toledo, Nicholas R. Del Rio, Geraint Duck, Laura Inés Furlong, Nichealla Keath, Dana Klassen, Jamie P. McCusker, Núria Queralt-Rosinach, Matthias Samwald, Natalia Villanueva-Rosales, Mark D. Wilkinson, Robert Hoehndorf

J. Biomed. Semant., 2014

Identifying First Responder Communities Using Social Network Analysis.

John S. Erickson, Katherine Chastain, Zachary Fry, Jamie P. McCusker, Rui Yan, Evan W. Patton, Deborah L. McGuinness

Proceedings of the ISWC 2014 Posters & Demonstrations Track a track within the 13th International Semantic Web Conference, 2014

A Nanopublication Framework for Biological Networks using Cytoscape.js.

Jamie P. McCusker, Rui Yan, Kusum Solanki, John S. Erickson, Cynthia Chang, Michel Dumontier, Jonathan S. Dordick, Deborah L. McGuinness

Proceedings of the 5th International Conference on Biomedical Ontology, 2014

2013

SemantEco: a next-generation web observatory.

A. Patrice Seyed, Timothy Lebo, Evan W. Patton, Jamie P. McCusker, Deborah L. McGuinness

Proceedings of the 22nd International World Wide Web Conference, 2013

Towards Next Generation Health Data Exploration: A Data Cube-Based Investigation into Population Statistics for Tobacco.

Jamie P. McCusker, Deborah L. McGuinness, Jeongmin Lee, Chavon Thomas, Paul Courtney, Zaria Tatalovich, Noshir S. Contractor, Glen D. Morgan, Abdul R. Shaikh

Proceedings of the 46th Hawaii International Conference on System Sciences, 2013

Next Generation Cancer Data Discovery, Access, and Integration Using Prizms and Nanopublications.

Jamie P. McCusker, Timothy Lebo, Michael Krauthammer, Deborah L. McGuinness

Proceedings of the Data Integration in the Life Sciences - 9th International Conference, 2013

2012

Translating standards into practice - One Semantic Web API for Gene Expression.

Helena F. Deus, Eric Prud'hommeaux, Michael Miller, Jun Zhao, James Malone, Tomasz Adamusiak, Jamie P. McCusker, Sudeshna Das, Philippe Rocca-Serra, Ronan Fox, M. Scott Marshall

J. Biomed. Informatics, 2012

Parallel Identities for Managing Open Government Data.

Jamie P. McCusker, Timothy Lebo, Cynthia Chang, Deborah L. McGuinness, Paulo Pinheiro da Silva

IEEE Intell. Syst., 2012

A semantic web framework to integrate cancer omics data with biological knowledge.

Matthew Holford, Jamie P. McCusker, Kei-Hoi Cheung, Michael Krauthammer

BMC Bioinform., 2012

Public Health Surveillance Using Global Health Explorer.

Jamie P. McCusker, Jeongmin Lee, Chavon Thomas, Deborah L. McGuinness

Proceedings of the Joint Workshop on Semantic Technologies Applied to Biomedical Informatics and Individualized Medicine, 2012

Functional Requirements for Information Resource Provenance on the Web.

Jamie P. McCusker, Timothy Lebo, Alvaro Graves, Dominic DiFranzo, Paulo Pinheiro, Deborah L. McGuinness

Proceedings of the Provenance and Annotation of Data and Processes, 2012

Towards Semantically Enabled Next Generation Community Health Information Portals: The PopSciGrid Pilot.

Deborah L. McGuinness, Timothy Lebo, Li Ding, Jamie P. McCusker, Abdul R. Shaikh, Richard P. Moser, Glen D. Morgan, Zaria Tatalovich, Gordon Willis, Bradford W. Hesse, Noshir S. Contractor, Paul Courtney

Proceedings of the 45th Hawaii International International Conference on Systems Science (HICSS-45 2012), 2012

2011

Linked provenance data: A semantic Web-based approach to interoperable workflow traces.

Li Ding, James Michaelis, Jamie P. McCusker, Deborah L. McGuinness

Future Gener. Comput. Syst., 2011

The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside.

Joanne S. Luciano, Bosse Andersson, Colin R. Batchelor, Olivier Bodenreider, Tim Clark, Christine K. Denney, Christopher Domarew, Thomas Gambet, Lee Harland, Anja Jentzsch, Vipul Kashyap, Peter J. Kos, Julia Kozlovsky, Timothy Lebo, M. Scott Marshall, Jamie P. McCusker, Deborah L. McGuinness, Chimezie Ogbuji, Elgar Pichler, Robert L. Powers, Eric Prud'hommeaux, Matthias Samwald, Lynn M. Schriml, Peter J. Tonellato, Patricia L. Whetzel, Jun Zhao, Susie Stephens, Michel Dumontier

J. Biomed. Semant., 2011

Where did you hear that? Information and the Sources They Come From.

Jamie P. McCusker, Timothy Lebo, Li Ding, Cynthia Chang, Paulo Pinheiro da Silva, Deborah L. McGuinness

Proceedings of the First International Workshop on Linked Science 2011, 2011

Towards an Ontology for Conceptual Modeling.

Jamie P. McCusker, Joanne S. Luciano, Deborah L. McGuinness

Proceedings of the 2nd International Conference on Biomedical Ontology, 2011

2010

Analysis of Cancer Omics Data In A Semantic Web Framework.

Matthew Holford, Jamie P. McCusker, Kei-Hoi Cheung, Michael Krauthammer

Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, 2010

When owl: sameAs Isn't the Same: An Analysis of Identity in Linked Data.

Harry Halpin, Patrick J. Hayes, Jamie P. McCusker, Deborah L. McGuinness, Henry S. Thompson

Proceedings of the Semantic Web - ISWC 2010 - 9th International Semantic Web Conference, 2010

Towards Identity in Linked Data.

Jamie P. McCusker, Deborah L. McGuinness

Proceedings of the 7th International Workshop on OWL: Experiences and Directions (OWLED 2010), 2010

Explorations into the Provenance of High Throughput Biomedical Experiments.

Jamie P. McCusker, Deborah L. McGuinness

Proceedings of the Provenance and Annotation of Data and Processes, 2010

2009

Semantic web data warehousing for caGrid.

Jamie P. McCusker, Joshua A. Phillips, Alejandra N. González-Beltrán, Anthony Finkelstein, Michael Krauthammer

BMC Bioinform., 2009

2008

Yale Image Finder (YIF): a new search engine for retrieving biomedical images.

Songhua Xu, Jamie P. McCusker, Michael Krauthammer

Bioinform., 2008