James Richard Perkins

According to our database, James Richard Perkins authored at least 12 papers between 2012 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Integrating differential expression, co-expression and gene network analysis for the identification of common genes associated with tumor angiogenesis deregulation.

Beatriz Monterde, Elena Rojano, José Córdoba-Caballero, Pedro Seoane, James Richard Perkins, Miguel Ángel Medina, Juan A. G. Ranea

J. Biomed. Informatics, August, 2023

2022

Assigning protein function from domain-function associations using DomFun.

Elena Rojano, Fernando Moreno Jabato, James Richard Perkins, José Córdoba-Caballero, Federico García-Criado, Ian Sillitoe, Christine A. Orengo, Juan A. G. Ranea, Pedro Seoane-Zonjic

BMC Bioinform., 2022

2020

Comprehensive Analysis of Patients with Undiagnosed Genetic Diseases Using the Patient Exploration Tools Suite (PETS).

Elena Rojano, Pedro Seoane-Zonjic, Fernando Moreno Jabato, James Richard Perkins, Juan A. G. Ranea

Proceedings of the Bioinformatics and Biomedical Engineering, 2020

Kernel Based Approaches to Identify Hidden Connections in Gene Networks Using NetAnalyzer.

Fernando Moreno Jabato, Elena Rojano, James Richard Perkins, Juan Antonio Garcia-Ranea, Pedro Seoane-Zonjic

Proceedings of the Bioinformatics and Biomedical Engineering, 2020

2019

Regulatory variants: from detection to predicting impact.

Elena Rojano, Pedro Seoane, Juan A. G. Ranea, James Richard Perkins

Briefings Bioinform., 2019

Associating Protein Domains with Biological Functions: A Tripartite Network Approach.

Elena Rojano, James Richard Perkins, Ian Sillitoe, Christine A. Orengo, Juan Antonio Garcia-Ranea, Pedro Seoane

Proceedings of the Bioinformatics and Biomedical Engineering, 2019

2017

Weighted Epistatic Analysis of NSAIDs Hypersensitivity Data.

Alex Upton, Miguel Blanca, José Antonio Cornejo-García, James Richard Perkins

Eng. Appl. Artif. Intell., 2017

Revealing the Relationship Between Human Genome Regions and Pathological Phenotypes Through Network Analysis.

Elena Rojano, Pedro Seoane, Anibal Bueno-Amoros, James Richard Perkins, Juan Antonio Garcia-Ranea

Proceedings of the Bioinformatics and Biomedical Engineering, 2017

2016

Review: High-performance computing to detect epistasis in genome scale data sets.

Alex Upton, Oswaldo Trelles, José Antonio Cornejo-García, James Richard Perkins

Briefings Bioinform., 2016

2015

Epistatic Analysis of Clarkson Disease.

Alex Upton, Oswaldo Trelles, James Richard Perkins

Proceedings of the International Conference on Computational Science, 2015

2014

A Cloud-based GWAS Analysis Pipeline for Clinical Researchers.

Paul Heinzlreiter, James Richard Perkins, Óscar Torreño Tirado, Tor Johan Mikael Karlsson, Juan Antonio Ranea, Andreas Mitterecker, Miguel Blanca, Oswaldo Trelles

Proceedings of the CLOSER 2014, 2014

2012

Gene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysis.

Jonathan G. Lees, Corin Yeats, James Richard Perkins, Ian Sillitoe, Robert Rentzsch, Benoit H. Dessailly, Christine A. Orengo

Nucleic Acids Res., 2012