James P. Carson

According to our database, James P. Carson authored at least 24 papers between 2003 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

brainlife.io: A decentralized and open source cloud platform to support neuroscience research.

Soichi Hayashi, Bradley Caron, Anibal Sólon Heinsfeld, Sophia Vinci-Booher, Brent C. McPherson, Daniel N. Bullock, Giulia Berto, J. Guiomar Niso, Sandra Hanekamp, Daniel Levitas, Lindsey Kitchell, Josiah Leong, Filipi N. Silva, Serge Koudoro, Hanna Willis, Jasleen Jolly, Derek Pisner, Taylor Zuidema, Jan Kurzwaski, Koulla Mikellidou, Aurore Bussalb, Christopher Rorden, Conner Victory, Dheeraj Bhatia, Dogu Baran Aydogan, Frank C. Yeh, Franco Delogu, Javier Guaje, Jelle Veraart, Jeremy Fischer, Joshua Faskowitz, Maximilien Chaumon, Ricardo Fabrega, David Hunt, Shawn McKee, Shaw T. Brown, Stephanie Heyman, Vittorio Iacovella, Amanda Mejia, Daniele Marinazzo, R. Cameron Craddock, Emanuele Olivetti, Jamie Hanson, Paolo Avesani, Eleftherios Garyfallidis, Daniel Stanzione, James P. Carson, Robert Henschel, David Y. Hancock, Craig A. Stewart, David M. Schnyer, Damian Eke, Russell A. Poldrack, Nathalie George, Holly Bridge, Ilaria Sani, Winrich Freiwald, Aina Puce, Nicholas Port, Franco Pestilli

CoRR, 2023

2016

A chicken embryo cardiac outflow tract atlas for registering changes due to abnormal blood flow.

James P. Carson, Monique Y. Rennie, Michael Danilchik, Kent L. Thornburg, Sandra Rugonyi

Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

2015

A Digital Atlas of Ion Channel Expression Patterns in the Two-Week-Old Rat Brain.

Volodymyr Shcherbatyy, James P. Carson, Murat Yaylaoglu, Katharina Jäckle, Frauke Grabbe, Maren Brockmeyer, Halenur Yavuz, Gregor Eichele

Neuroinformatics, 2015

2014

Automated measurement of heterogeneity in CT images of healthy and diseased rat lungs using variogram analysis of an octree decomposition.

Richard E. Jacob, James P. Carson

BMC Medical Imaging, 2014

3D imaging of microbial biofilms: Integration of synchrotron imaging and an interactive visualization interface.

Mathew Thomas, Matthew J. Marshall, Erin A. Miller, Andrew P. Kuprat, Kerstin Kleese van Dam, James P. Carson

Proceedings of the 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2014

2013

Automated, Foot-Bone Registration Using Subdivision-Embedded Atlases for Spatial Mapping of Bone Mineral Density.

Lu Liu, Paul K. Commean, Charles Hildebolt, David R. Sinacore, Fred W. Prior, James P. Carson, Ioannis A. Kakadiaris, Tao Ju

J. Digit. Imaging, 2013

A bidirectional coupling procedure applied to multiscale respiratory modeling.

Andrew P. Kuprat, Senthil Kabilan, James P. Carson, Richard A. Corley, Daniel R. Einstein

J. Comput. Phys., 2013

2012

Similarity-Based Appearance-Prior for Fitting a Subdivision Mesh in Gene Expression Images.

Yen H. Le, Uday Kurkure, Nikos Paragios, Tao Ju, James P. Carson, Ioannis A. Kakadiaris

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

Visualization of high resolution spatial mass spectrometric data during acquisition.

Mathew Thomas, Brandi S. Heath, Julia Laskin, Dongsheng Li, Ellen Liu, Katrina Hui, Andrew P. Kuprat, Kerstin Kleese van Dam, James P. Carson

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

Detecting distance between injected microspheres and target tumor via 3D reconstruction of tissue sections.

James P. Carson, Andrew P. Kuprat, Sean M. Colby, Cassi A. Davis, Christopher A. Basciano, Kevin Greene, John Feo, Andrew Kennedy

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

Velo and REXAN - Integrated data management and high speed analysis for experimental facilities.

Kerstin Kleese van Dam, James P. Carson, Abigail L. Corrigan, Daniel R. Einstein, Zoe Guillen, Brandi Heath, Andrew P. Kuprat, Ingela Lanekoff, Carina Lansing, Julia Laskin, Dongsheng Li, Yan Liu, Matthew J. Marshall, Erin A. Miller, Galya Orr, Paulo Pinheiro da Silva, Seun Ryu, Craig Szymanski, Mathew Thomas

Proceedings of the 8th IEEE International Conference on E-Science, 2012

2011

Markov Random Field-based fitting of a subdivision-based geometric atlas.

Uday Kurkure, Yen H. Le, Nikos Paragios, Tao Ju, James P. Carson, Ioannis A. Kakadiaris

Proceedings of the IEEE International Conference on Computer Vision, 2011

Lossless 3-D reconstruction and registration of semi-quantitative gene expression data in the mouse brain.

Matthew A. Enlow, Tao Ju, Ioannis A. Kakadiaris, James P. Carson

Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011

Landmark/image-based deformable registration of gene expression data.

Uday Kurkure, Yen H. Le, Nikos Paragios, James P. Carson, Tao Ju, Ioannis A. Kakadiaris

Proceedings of the 24th IEEE Conference on Computer Vision and Pattern Recognition, 2011

2010

High resolution lung airway cast segmentation with proper topology suitable for computational fluid dynamic simulations.

James P. Carson, Daniel R. Einstein, Kevin R. Minard, Michelle V. Fanucchi, Christopher D. Wallis, Richard A. Corley

Comput. Medical Imaging Graph., 2010

2009

Automatic identification and truncation of boundary outlets in complex imaging-derived biomedical geometries.

Xiangmin Jiao, Daniel R. Einstein, Vladimir Dyedov, James P. Carson

Medical Biol. Eng. Comput., 2009

2007

Learning-Based Segmentation Framework for Tissue Images Containing Gene Expression Data.

Musodiq Bello, Tao Ju, James P. Carson, Joe D. Warren, Wah Chiu, Ioannis A. Kakadiaris

IEEE Trans. Medical Imaging, 2007

2005

Building 3D surface networks from 2D curve networks with application to anatomical modeling.

Tao Ju, Joe D. Warren, James P. Carson, Gregor Eichele, Christina Thaller, Wah Chiu, Musodiq Bello, Ioannis A. Kakadiaris

Vis. Comput., 2005

A Digital Atlas to Characterize the Mouse Brain Transcriptome.

James P. Carson, Tao Ju, Hui-Chen Lu, Christina Thaller, Mei Xu, Sarah L. Pallas, Michael C. Crair, Joe D. Warren, Wah Chiu, Gregor Eichele

PLoS Comput. Biol., 2005

Hybrid Segmentation Framework for Tissue Images Containing Gene Expression Data.

Musodiq Bello, Tao Ju, Joe D. Warren, James P. Carson, Wah Chiu, Christina Thaller, Gregor Eichele, Ioannis A. Kakadiaris

Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Data Mining in situ Gene Expression Patterns at Cellular Resolution.

James P. Carson, Christina Thaller, Musodiq Bello, Wah Chiu, Tao Ju, Joe D. Warren, Ioannis A. Kakadiaris, Gregor Eichele

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005

Data Mining in situ Gene Expression Patterns at Cellular Resolution.

James P. Carson, Tao Ju, Christina Thaller, Musodiq Bello, Joe D. Warren, Gregor Eichele, Wah Chiu

Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005

2004

Landmark-Driven, Atlas-Based Segmentation of Mouse Brain Tissue Images Containing Gene Expression Data.

Ioannis A. Kakadiaris, Musodiq Bello, Shiva Arunachalam, Wei Kang, Tao Ju, Joe D. Warren, James P. Carson, Wah Chiu, Christina Thaller, Gregor Eichele

Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

2003

A geometric database for gene expression data.

Joe D. Warren, Tao Ju, Gregor Eichele, Christina Thaller, Wah Chiu, James P. Carson

Proceedings of the First Eurographics Symposium on Geometry Processing, 2003