James Hadfield

According to our database, James Hadfield authored at least 6 papers between 2018 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2023

Joint visualization of seasonal influenza serology and phylogeny to inform vaccine composition.

Jover Lee, James Hadfield, Allison Black, Thomas R. Sibley, Richard A. Neher, Trevor Bedford, John Huddleston

Frontiers Bioinform., May, 2023

2022

RCandy: an R package for visualizing homologous recombinations in bacterial genomes.

Chrispin Chaguza, Gerry Tonkin-Hill, Stephanie W. Lo, James Hadfield, Nicholas J. Croucher, Simon R. Harris, Stephen D. Bentley

Bioinform., 2022

2021

Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens.

John Huddleston, James Hadfield, Thomas R. Sibley, Jover Lee, Kairsten Fay, Misja Ilcisin, Elias Harkins, Trevor Bedford, Richard A. Neher, Emma B. Hodcroft

J. Open Source Softw., 2021

High-throughput sequencing of SARS-CoV-2 in wastewater provides insights into circulating variants.

Rafaela S. Fontenele, Simona Kraberger, James Hadfield, Erin M. Driver, Devin Bowes, LaRinda A. Holland, Temitope O. Faleye, Sangeet Adhikari, Rahul Kumar, Rosa Inchausti, Wydale K. Holmes, Stephanie Deitrick, Philip Brown, Darrell Duty, Aruni Bhatnagar, Ray A. Yeager, Rochelle H. Holm, Kevin Dixon, Tim Constantine, Melissa A. Wilson, Efrem S. Lim, Xiaofang Jiang, Rolf U. Halden, Matthew Scotch, Arvind Varsani

Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2018

Nextstrain: real-time tracking of pathogen evolution.

James Hadfield, Colin Megill, Sidney M. Bell, John Huddleston, Barney Potter, Charlton Callender, Pavel Sagulenko, Trevor Bedford, Richard A. Neher

Bioinform., 2018

Phandango: an interactive viewer for bacterial population genomics.

James Hadfield, Nicholas J. Croucher, Richard J. Goater, Khalil AbuDahab, David M. Aanensen, Simon R. Harris

Bioinform., 2018