James H. Degnan

According to our database, James H. Degnan authored at least 9 papers between 2012 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Trying out a million genes to find the perfect pair with <i>RTIST</i>.

Gleb Zhelezov, James H. Degnan

Bioinform., 2022

2021

DiffuScope: inferring post-specific diffusion network.

Md Rashidul Hasan, Dheeman Saha, Farhan Asif Chowdhury, James H. Degnan, Abdullah Mueen

Proceedings of the ASONAM '21: International Conference on Advances in Social Networks Analysis and Mining, Virtual Event, The Netherlands, November 8, 2021

2020

PRANC: ML species tree estimation from the ranked gene trees under coalescence.

Anastasiia Kim, James H. Degnan

Bioinform., 2020

2018

Species Tree Inference from Gene Splits by Unrooted STAR Methods.

Elizabeth S. Allman, James H. Degnan, John A. Rhodes

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

2015

Hybrid-Lambda: simulation of multiple merger and Kingman gene genealogies in species networks and species trees.

Sha Zhu, James H. Degnan, Sharyn Goldstien, Bjarki Eldon

BMC Bioinform., 2015

2013

Species Tree Inference by the STAR Method and Its Generalizations.

Elizabeth S. Allman, James H. Degnan, John A. Rhodes

J. Comput. Biol., 2013

Evaluating Variations on the STAR Algorithm for Relative Efficiency and Sample Sizes Needed to Reconstruct Species Trees.

James H. Degnan

Proceedings of the Biocomputing 2013: Proceedings of the Pacific Symposium, 2013

2012

A Characterization of the Set of Species Trees that Produce Anomalous Ranked Gene Trees.

James H. Degnan, Noah A. Rosenberg, Tanja Stadler

IEEE ACM Trans. Comput. Biol. Bioinform., 2012

A polynomial time algorithm for calculating the probability of a ranked gene tree given a species tree.

Tanja Stadler, James H. Degnan

Algorithms Mol. Biol., 2012