James E. Johnson

According to our database, James E. Johnson authored at least 17 papers between 1991 and 2021.

Collaborative distances:

• Dijkstra number of two.
• Erdős number of four.

2021

ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework.

Subina P. Mehta, Marie Crane, Emma Leith, Bérénice Batut, Saskia D. Hiltemann, Magnus Ø. Arntzen, Benoît Josef Kunath, Francesco Delogu, Ray Sajulga, Praveen Kumar, James E. Johnson, Timothy J. Griffin, Pratik D. Jagtap

F1000Research, 2021

2019

Closed-Loop Control of a Magnetically Actuated Fiber-Coupled Laser for Computer-Assisted Laser Microsurgery.

Hamed Mohammadbagherpoor, Alperen Acemoglu, Leonardo S. Mattos, Darwin G. Caldwell, James E. Johnson, John Muth, Edward Grant

Proceedings of the 19th International Conference on Advanced Robotics, 2019

2018

Improve your Galaxy text life: The Query Tabular Tool.

James E. Johnson, Praveen Kumar, Caleb Easterly, Mark Esler, Subina P. Mehta, Arthur C. Eschenlauer, Adrian D. Hegeman, Pratik D. Jagtap, Timothy J. Griffin

F1000Research, 2018

2016

Chapter 13. Using Galaxy for Proteomics.

Candace R. Guerrero, Pratik D. Jagtap, James E. Johnson, Timothy J. Griffin

Proceedings of the Proteome Informatics, 2016

2014

Wrangling Galaxy's reference data.

Daniel J. Blankenberg, James E. Johnson, The Galaxy Team, James Taylor, Anton Nekrutenko

Bioinform., 2014

2013

MMuFLR: missense mutation and frameshift location reporter.

Susan K. Rathe, James E. Johnson, Kevin A. T. Silverstein, Jesse J. Erdmann, Adrienne L. Watson, Flavia E. Popescu, John R. Ohlfest, David A. Largaespada

Bioinform., 2013

2004

Formal Specification of a Web Services Protocol.

James E. Johnson, David E. Langworthy, Leslie Lamport, Friedrich H. Vogt

Proceedings of the First International Workshop on Web Services and Formal Methods, 2004

EOS Aura atmospheric chemistry data products.

James E. Johnson, Suraiya P. Ahmad

Proceedings of the 2004 IEEE International Geoscience and Remote Sensing Symposium, 2004

2003

MtDB: a database for personalized data mining of the model legume Medicago truncatula transcriptome.

Anne-Françoise J. Lamblin, John A. Crow, James E. Johnson, Kevin A. T. Silverstein, Timothy M. Kunau, Alan Kilian, Diane Benz, Martina V. Stromvik, Gabriella Endré, Kathryn A. VandenBosch, Douglas R. Cook, Nevin D. Young, Ernest F. Retzel

Nucleic Acids Res., 2003

TableView: Portable Genomic Data Visualization.

James E. Johnson, Martina V. Stromvik, Kevin A. T. Silverstein, John A. Crow, Elizabeth Shoop, Ernest F. Retzel

Bioinform., 2003

2001

The MetaFam Server: a comprehensive protein family resource.

Kevin A. T. Silverstein, Elizabeth Shoop, James E. Johnson, Alan Kilian, John L. Freeman, Timothy M. Kunau, Ihab A. Awad, Margaret Mayer, Ernest F. Retzel

Nucleic Acids Res., 2001

MetaFam: a unified classification of protein families. I. Overview and statistics.

Kevin A. T. Silverstein, Elizabeth Shoop, James E. Johnson, Ernest F. Retzel

Bioinform., 2001

MetaFam: a unified classification of protein families. II. Schema and query capabilities.

Elizabeth Shoop, Kevin A. T. Silverstein, James E. Johnson, Ernest F. Retzel

Bioinform., 2001

2000

PANAL: an integrated resource for Protein sequence ANALysis.

Kevin A. T. Silverstein, Alan Kilian, John L. Freeman, James E. Johnson, Ihab A. Awad, Ernest F. Retzel

Bioinform., 2000

1996

Overview of the Spiralog File System.

James E. Johnson, William A. Laing

Digit. Tech. J., 1996

1994

The Structure of the OpenVMS Management Station.

James E. Johnson

Digit. Tech. J., 1994

1991

Transaction Management Support in the VMS Operating System Kernel.

William A. Laing, James E. Johnson, Robert V. Landau

Digit. Tech. J., 1991