James C. Gee

Orcid: 0000-0002-2258-0187

According to our database1, James C. Gee authored at least 254 papers between 1993 and 2024.

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Bibliography

2024
TransMatch: A Transformer-Based Multilevel Dual-Stream Feature Matching Network for Unsupervised Deformable Image Registration.
IEEE Trans. Medical Imaging, January, 2024

Evidence Is All You Need: Ordering Imaging Studies via Language Model Alignment with the ACR Appropriateness Criteria.
CoRR, 2024

Deep Learning in Medical Image Registration: Magic or Mirage?
CoRR, 2024

Deep Implicit Optimization for Robust and Flexible Image Registration.
CoRR, 2024

A Textbook Remedy for Domain Shifts: Knowledge Priors for Medical Image Analysis.
CoRR, 2024

Neural Ordinary Differential Equation based Sequential Image Registration for Dynamic Characterization.
CoRR, 2024

FireANTs: Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration.
CoRR, 2024

A Concept-based Interpretable Model for the Diagnosis of Choroid Neoplasias using Multimodal Data.
CoRR, 2024

Generative Adversarial Bayesian Optimization for Surrogate Objectives.
CoRR, 2024

2023
Towards Establishing Dense Correspondence on Multiview Coronary Angiography: From Point-to-Point to Curve-to-Curve Query Matching.
CoRR, 2023

Brain Decodes Deep Nets.
CoRR, 2023

SplatArmor: Articulated Gaussian splatting for animatable humans from monocular RGB videos.
CoRR, 2023

The Role of Chain-of-Thought in Complex Vision-Language Reasoning Task.
CoRR, 2023

Memory Encoding Model.
CoRR, 2023

Retinotopy Inspired Brain Encoding Model and the All-for-One Training Recipe.
CoRR, 2023

Mesh Strikes Back: Fast and Efficient Human Reconstruction from RGB videos.
CoRR, 2023


SynthA1c: Towards Clinically Interpretable Patient Representations for Diabetes Risk Stratification.
Proceedings of the Predictive Intelligence in Medicine - 6th International Workshop, 2023

Beyond mAP: Towards Better Evaluation of Instance Segmentation.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2023

2022
Learning-Based Radiomic Prediction of Type 2 Diabetes Mellitus Using Image-Derived Phenotypes.
CoRR, 2022

Beyond mAP: Re-evaluating and Improving Performance in Instance Segmentation with Semantic Sorting and Contrastive Flow.
CoRR, 2022

NODEO: A Neural Ordinary Differential Equation Based Optimization Framework for Deformable Image Registration.
Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2022

2021
Brain MRI Deep Learning and Bayesian Inference System Augments Radiology Resident Performance.
J. Digit. Imaging, 2021

Deformable Image Registration using Neural ODEs.
CoRR, 2021

2020
Enhanced generative adversarial network for 3D brain MRI super-resolution.
Proceedings of the IEEE Winter Conference on Applications of Computer Vision, 2020

Interpretable Identification of Interstitial Lung Disease (ILD) Associated Findings from CT.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Automated Meshing of Anatomical Shapes for Deformable Medial Modeling: Application to the Placenta in 3D Ultrasound.
Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

Spatially Informed CNN for Automated Cone Detection in Adaptive Optics Retinal Images.
Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

Nested Scale-Editing for Conditional Image Synthesis.
Proceedings of the 2020 IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2020

2019
Leveraging Label-Specific Discriminant Mapping Features for Multi-Label Learning.
ACM Trans. Knowl. Discov. Data, 2019

Barnes-Hut Approximation for Point SetGeodesic Shooting.
CoRR, 2019

Interpretable Multimodality Embedding of Cerebral Cortex Using Attention Graph Network for Identifying Bipolar Disorder.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Shape Decomposition of Foveal Pit Morphology Using Scan Geometry Corrected OCT.
Proceedings of the Ophthalmic Medical Image Analysis - 6th International Workshop, 2019

Hybird Single-Multiple Frame Super-Resolution Reconstruction of Video Face Image.
Proceedings of the Image and Graphics - 10th International Conference, 2019

Combining Cross Entropy Loss with Manually Defined Hard Example for Semantic Image Segmentation.
Proceedings of the Image and Graphics - 10th International Conference, 2019

2018
Chain-based big data access control infrastructure.
J. Supercomput., 2018

Combining Deep Learning and Multi-atlas Label Fusion for Automated Placenta Segmentation from 3DUS.
Proceedings of the Data Driven Treatment Response Assessment - and - Preterm, Perinatal, and Paediatric Image Analysis, 2018

Transfer Learning Approach to Predict Biopsy-Confirmed Malignancy of Lung Nodules from Imaging Data: A Pilot Study.
Proceedings of the Image Analysis for Moving Organ, Breast, and Thoracic Images, 2018

2D Modeling and Correction of Fan-Beam Scan Geometry in OCT.
Proceedings of the Computational Pathology and Ophthalmic Medical Image Analysis, 2018

V-Chain: A Blockchain-Based Car Lease Platform.
Proceedings of the IEEE International Conference on Internet of Things (iThings) and IEEE Green Computing and Communications (GreenCom) and IEEE Cyber, 2018

Probabilistic Time Context Framework for Big Data Collaborative Recommendation.
Proceedings of the 2018 International Conference on Computing and Artificial Intelligence, 2018

A Blockchain-based Architecture Framework for Secure Sharing of Personal Health Data.
Proceedings of the 20th IEEE International Conference on e-Health Networking, 2018

2017
Retinal Image Denoising via Bilateral Filter with a Spatial Kernel of Optimally Oriented Line Spread Function.
Comput. Math. Methods Medicine, 2017

Multivariate modeling using quantitative CT metrics may improve accuracy of diagnosis of bronchiolitis obliterans syndrome after lung transplantation.
Comput. Biol. Medicine, 2017

Automated Segmentation of the Choroid in EDI-OCT Images with Retinal Pathology Using Convolution Neural Networks.
Proceedings of the Fetal, Infant and Ophthalmic Medical Image Analysis, 2017

2016
The Power of Connecting Dots: Advanced Techniques to Evaluate Brain Functional Connectivity in Humans.
IEEE Trans. Biomed. Eng., 2016

Automatic segmentation of canine retinal OCT using adaptive gradient enhancement and region growing.
Proceedings of the Medical Imaging 2016: Biomedical Applications in Molecular, Structural, and Functional Imaging, San Diego, California, United States, 27 February, 2016

2015
Optimal Symmetric Multimodal Templates and Concatenated Random Forests for Supervised Brain Tumor Segmentation (Simplified) with ANTsR.
Neuroinformatics, 2015

Decomposing cerebral blood flow MRI into functional and structural components: A non-local approach based on prediction.
NeuroImage, 2015

Searchable Public-Key Encryption with Data Sharing in Dynamic Groups for Mobile Cloud Storage.
J. Univers. Comput. Sci., 2015

Measuring sparse temporal-variation for accurate registration of dynamic contrast-enhanced breast MR images.
Comput. Medical Imaging Graph., 2015

2014
Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements.
NeuroImage, 2014

Subject-specific functional parcellation via Prior Based Eigenanatomy.
NeuroImage, 2014

Relating brain anatomy and cognitive ability using a multivariate multimodal framework.
NeuroImage, 2014

Histology-derived volumetric annotation of the human hippocampal subfields in postmortem MRI.
NeuroImage, 2014

Landmark matching based retinal image alignment by enforcing sparsity in correspondence matrix.
Medical Image Anal., 2014

Reproducibility of graph metrics of human brain structural networks.
Frontiers Neuroinformatics, 2014

The Insight ToolKit image registration framework.
Frontiers Neuroinformatics, 2014

Single-Subject Structural Networks with Closed-Form Rotation Invariant Matching Improve Power in Developmental Studies of the Cortex.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014

Correlation between Topological Descriptors of the Breast Ductal Network from Clinical Galactograms and Texture Features of Corresponding Mammograms.
Proceedings of the Breast Imaging - 12th International Workshop, IWDM 2014, Gifu City, Japan, June 29, 2014

Cortical parcellation for neonatal brains.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

2013
Single-Image Vignetting Correction from Gradient Distribution Symmetries.
IEEE Trans. Pattern Anal. Mach. Intell., 2013

Anatomically-Constrained PCA for Image Parcellation.
Proceedings of the International Workshop on Pattern Recognition in Neuroimaging, 2013

A Generative Model for OCT Retinal Layer Segmentation by Integrating Graph-Based Multi-surface Searching and Image Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Optic Disc and Cup Segmentation from Color Fundus Photograph Using Graph Cut with Priors.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Fusing Functional Signals by Sparse Canonical Correlation Analysis Improves Network Reproducibility.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

A fully-automated software pipeline for integrating breast density and parenchymal texture analysis for digital mammograms: parameter optimization in a case-control breast cancer risk assessment study.
Proceedings of the Medical Imaging 2013: Computer-Aided Diagnosis, 2013

Texture feature standardization in digital mammography for improving generalizability across devices.
Proceedings of the Medical Imaging 2013: Computer-Aided Diagnosis, 2013

An automated drusen detection system for classifying age-related macular degeneration with color fundus photographs.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Using Region Trajectories to Construct an Accurate and Efficient Polyaffine Transform Model.
Proceedings of the Information Processing in Medical Imaging, 2013

Predicting Cognitive Data from Medical Images Using Sparse Linear Regression.
Proceedings of the Information Processing in Medical Imaging, 2013

2012
A diffusion tensor brain template for Rhesus Macaques.
NeuroImage, 2012

A Unified Image Registration Framework for ITK.
Proceedings of the Biomedical Image Registration - 5th International Workshop, 2012

Eigenanatomy Improves Detection Power for Longitudinal Cortical Change.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

A Phantom Study for Assessing the Effect of Different Digital Detectors on Mammographic Texture Features.
Proceedings of the Breast Imaging, 2012

Retrospective illumination correction of retinal fundus images from gradient distribution sparsity.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Agreement between the white matter connectivity based on the tensor-based morphometry and the volumetric white matter parcellations based on diffusion tensor imaging.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Partial sparse canonical correlation analysis (PSCCA) for population studies in medical imaging.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Reconstruction of the human hippocampus in 3D from histology and high-resolution ex-vivo MRI.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2011
Point Set Registration Using Havrda-Charvat-Tsallis Entropy Measures.
IEEE Trans. Medical Imaging, 2011

Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge.
IEEE Trans. Medical Imaging, 2011

A Nonconservative Lagrangian Framework for Statistical Fluid Registration - SAFIRA.
IEEE Trans. Medical Imaging, 2011

Topological Well-Composedness and Glamorous Glue: A Digital Gluing Algorithm for Topologically Constrained Front Propagation.
IEEE Trans. Image Process., 2011

An Open Source Multivariate Framework for n-Tissue Segmentation with Evaluation on Public Data.
Neuroinformatics, 2011

A reproducible evaluation of ANTs similarity metric performance in brain image registration.
NeuroImage, 2011

Brain Parcellation Aids in Electrode Localization in Epileptic Patients.
Proceedings of the Augmented Environments for Computer-Assisted Interventions, 2011

Adaptive Multi-cluster Fuzzy C-Means Segmentation of Breast Parenchymal Tissue in Digital Mammography.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Multiscale analysis revisited: Detection of drusen and vessel in digital retinal images.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

Structural connectivity via the tensor-based morphometry.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

Landmark Matching Based Automatic Retinal Image Registration with Linear Programming and Self-similarities.
Proceedings of the Information Processing in Medical Imaging, 2011

2010
N4ITK: Improved N3 Bias Correction.
IEEE Trans. Medical Imaging, 2010

Early parental care is important for hippocampal maturation: Evidence from brain morphology in humans.
NeuroImage, 2010

Evaluation of volume-based and surface-based brain image registration methods.
NeuroImage, 2010

Cerebral cortical folding analysis with multivariate modeling and testing: Studies on gender differences and neonatal development.
NeuroImage, 2010

The optimal template effect in hippocampus studies of diseased populations.
NeuroImage, 2010

Dementia induces correlated reductions in white matter integrity and cortical thickness: A multivariate neuroimaging study with sparse canonical correlation analysis.
NeuroImage, 2010

A tract-specific framework for white matter morphometry combining macroscopic and microscopic tract features.
Medical Image Anal., 2010

Cranio-maxillofacial surgery simulation based on pre-specified target face configurations.
J. Zhejiang Univ. Sci. C, 2010

A Computational White Matter Atlas for Aging with Surface-Based Representation of Fasciculi.
Proceedings of the Biomedical Image Registration, 4th International Workshop, 2010

Relating Structural and Functional Connectivity to Performance in a Communication Task.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

Sparse Unbiased Analysis of Anatomical Variance in Longitudinal Imaging.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

Massive Particles for Brain Tractography.
Proceedings of the Advances in Artificial Intelligence, 2010

Shape similarity analysis of regions of interest in medical images.
Proceedings of the Medical Imaging 2010: Computer-Aided Diagnosis, San Diego, 2010

Accurate registration of dynamic contrast-enhanced breast MR images with robust estimation and linear programming.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

Estimation of image bias field with sparsity constraints.
Proceedings of the Twenty-Third IEEE Conference on Computer Vision and Pattern Recognition, 2010

2009
Directly Manipulated Free-Form Deformation Image Registration.
IEEE Trans. Image Process., 2009

A high-resolution computational atlas of the human hippocampus from postmortem magnetic resonance imaging at 9.4 T.
NeuroImage, 2009

Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration.
NeuroImage, 2009

Registration based cortical thickness measurement.
NeuroImage, 2009

Morphometric analysis of brain images with reduced number of statistical tests: A study on the gender-related differentiation of the corpus callosum.
Artif. Intell. Medicine, 2009

Automatic Correction of Intensity Nonuniformity from Sparseness of Gradient Distribution in Medical Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Tensor-Based Morphometry of Fibrous Structures with Application to Human Brain White Matter.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Gender Differences in Cerebral Cortical Folding: Multivariate Complexity-Shape Analysis with Insights into Handling Brain-Volume Differences.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2009

Denoising Intra-voxel Axon Fiber Orientations by Means of ECQMMF Method.
Proceedings of the MICAI 2009: Advances in Artificial Intelligence, 2009

A Framework for Craniofacial Surgery Simulation Based on Pre-Specified Target Face Configurations.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

Computational Analysis of HRCT Images for Characterization and Differentiation of ILD and COPD.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

A New Information-Theoretic Measure to Control the Robustness-Sensitivity Trade-Off for DMFFD Point-Set Registration.
Proceedings of the Information Processing in Medical Imaging, 2009

Multivariate High-Dimensional Cortical Folding Analysis, Combining Complexity and Shape, in Neonates with Congenital Heart Disease.
Proceedings of the Information Processing in Medical Imaging, 2009

2008
Digital Brain Atlases for Biomedicine [Life Sciences].
IEEE Signal Process. Mag., 2008

Structure-specific statistical mapping of white matter tracts.
NeuroImage, 2008

Erratum to "Resolving sentence ambiguity with planning and working memory resources: Evidence from fMRI" [NeuroImage 37 (2007) 361-378].
NeuroImage, 2008

Structural consequences of diffuse traumatic brain injury: A large deformation tensor-based morphometry study.
NeuroImage, 2008

Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain.
Medical Image Anal., 2008

Topological Repairing of 3D Digital Images.
J. Math. Imaging Vis., 2008

Shape-Based Alignment of Hippocampal Subfields: Evaluation in Postmortem MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Cardiac Medial Modeling and Time-Course Heart Wall Thickness Analysis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

A Comparison of Methods for Recovering Intra-voxel White Matter Fiber Architecture from Clinical Diffusion Imaging Scans.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

3D Cerebral Cortical Morphometry in Autism: Increased Folding in Children and Adolescents in Frontal, Parietal, and Temporal Lobes.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Surface-based modeling of white matter fasciculi with orientation encoding.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Building an atlas of hippocampal subfields using postmortem MRI.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Point-set registration of tagged HE-3 images using a structurally-based Jensen-Shannon divergence measure within a deterministic annealing framework.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Branching medial models for cardiac shape representation.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Nonparametric Markov priors for tissue segmentation.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Spatial correspondence based asymmetry analysis in FMRI.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Atlas-guided probabilistic diffusion-tensor fiber tractography.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Multivariate segmentation of brain tissues by fusion of MRI and DTI data.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

Robust regularization for the estimation of intra-voxel axon fiber orientations.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2008

Multivariate analysis of thalamo-cortical connectivity loss in TBI.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2008

2007
High-Dimensional Spatial Normalization of Diffusion Tensor Images Improves the Detection of White Matter Differences: An Example Study Using Amyotrophic Lateral Sclerosis.
IEEE Trans. Medical Imaging, 2007

Shape-Based Normalization of the Corpus Callosum for DTI Connectivity Analysis.
IEEE Trans. Medical Imaging, 2007

Guest editorial: Special Issue on Computational Neuroanatomy.
IEEE Trans. Medical Imaging, 2007

A Fuzzy, Nonparametric Segmentation Framework for DTI and MRI Analysis: With Applications to DTI-Tract Extraction.
IEEE Trans. Medical Imaging, 2007

Neuroinformatics for Genome-Wide 3-D Gene Expression Mapping in the Mouse Brain.
IEEE ACM Trans. Comput. Biol. Bioinform., 2007

Hippocampus-specific fMRI group activation analysis using the continuous medial representation.
NeuroImage, 2007

Resolving sentence ambiguity with planning and working memory resources: Evidence from fMRI.
NeuroImage, 2007

Multivariate examination of brain abnormality using both structural and functional MRI.
NeuroImage, 2007

Unbiased White Matter Atlas Construction Using Diffusion Tensor Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Evaluation of Shape-Based Normalization in the Corpus Callosum for White Matter Connectivity Analysis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Clinical Neonatal Brain MRI Segmentation Using Adaptive Nonparametric Data Models and Intensity-Based Markov Priors.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

How Do Registration Parameters Affect Quantitation of Lung Kinematics?
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Fuzzy Nonparametric DTI Segmentation for Robust Cingulum-Tract Extraction.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Multivariate Normalization with Symmetric Diffeomorphisms for Multivariate Studies.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Spatiotemporal Normalization for Longitudinal Analysis of Gray Matter Atrophy in Frontotemporal Dementia.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Non-Uniform Smoothing in Hippocampus-Specific Group Fmri Analysis.
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007

Pulmonary Kinematics from Hyperpolarized Helium-3 Tagged Magnetic Resonance Imaging.
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007

Symmetric Shape Averaging in the Diffeomorphic Space.
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007

A Fuzzy, Nonparametric Segmentation Framework for DTI and MRI Analysis.
Proceedings of the Information Processing in Medical Imaging, 2007

Structure-Specific Statistical Mapping of White Matter Tracts using the Continuous Medial Representation.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

Improved FFD B-Spline Image Registration.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

Multi-start Method with Prior Learning for Image Registration.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

Measuring Cortical Thickness Using An Image Domain Local Surface Model And Topology Preserving Segmentation.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

2006
Continuous Medial Representation for Anatomical Structures.
IEEE Trans. Medical Imaging, 2006

User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability.
NeuroImage, 2006

Deformable registration of diffusion tensor MR images with explicit orientation optimization.
Medical Image Anal., 2006

Pulmonary nodule detection in CT images with quantized convergence index filter.
Medical Image Anal., 2006

Editorial.
Medical Image Anal., 2006

Lagrangian frame diffeomorphic image registration: Morphometric comparison of human and chimpanzee cortex.
Medical Image Anal., 2006

3D Mouse Brain Reconstruction from Histology Using a Coarse-to-Fine Approach.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

A Generalization of Free-Form Deformation Image Registration Within the ITK Finite Element Framework.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

Symmetric Diffeomorphic Image Registration: Evaluating Automated Labeling of Elderly and Neurodegenerative Cortex and Frontal Lobe.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

Hippocampus-Specific fMRI Group Activation Analysis with Continuous M-Reps.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

Integrated Graph Cuts for Brain MRI Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

Generalized <i>n</i>-D <i>C</i><sup><i>k</i></sup> B-Spline Scattered Data Approximation with Confidence Values.
Proceedings of the Medical Imaging and Augmented Reality, 2006

Geodesic Image Normalization and Temporal Parameterization in the Space of Diffeomorphisms.
Proceedings of the Medical Imaging and Augmented Reality, 2006

Adaptive graph cuts with tissue priors for brain MRI segmentation.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

Efficient Generation of Shape-Based Reference Frames for the Corpus Callosum for DTI-based Connectivity Analysis.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2006

Analyzing Effects of Intra-Uterine Cocaine Exposure on Adolescent Brain Structure with Symmetric Diffeomorphisms.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2006

Diffusion-Tensor Image Registration.
Proceedings of the Visualization and Processing of Tensor Fields, 2006

Anatomy-Based Visualizations of Diffusion Tensor Images of Brain White Matter.
Proceedings of the Visualization and Processing of Tensor Fields, 2006

2005
Volumetric, connective, and morphologic changes in the brains of children with chromosome 22q11.2 deletion syndrome: an integrative study.
NeuroImage, 2005

Towards a model of lung biomechanics: pulmonary kinematics via registration of serial lung images.
Medical Image Anal., 2005

Constrained quadrilateral meshes of bounded size.
Int. J. Comput. Geom. Appl., 2005

Geodesic Image Interpolation: Parameterizing and Interpolating Spatiotemporal Images.
Proceedings of the Variational, 2005

Deformable Registration of Diffusion Tensor MR Images with Explicit Orientation Optimization.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Statistical Modeling of Shape and Appearance Using the Continuous Medial Representation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Towards a Dynamic Model of Pulmonary Parenchymal Deformation: Evaluation of Methods for Temporal Reparameterization of Lung Data.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

An Automated Approach to Connectivity-Based Partitioning of Brain Structures.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Parametric Medial Shape Representation in 3-D via the Poisson Partial Differential Equation with Non-linear Boundary Conditions.
Proceedings of the Information Processing in Medical Imaging, 2005

Reducing the Computational Cost for Statistical Medical Image Analysis: An MRI Study on the Sexual Morphological Differentiation of the Corpus Callosum.
Proceedings of the 18th IEEE Symposium on Computer-Based Medical Systems (CBMS 2005), 2005

2004
Visual data mining for modeling prior distributions in morphometry.
IEEE Signal Process. Mag., 2004

Structural shape characterization via exploratory factor analysis.
Artif. Intell. Medicine, 2004

A Dynamic Model of Average Lung Deformation Using Capacity-Based Reparameterization and Shape Averaging of Lung MR Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Regional Structural Characterization of the Brain of Schizophrenia Patients.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Towards Diffusion Profile Image Registration.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

Shape Averaging with Diffeomorphic Flows for Atlas Creation.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

Symmetric Geodesic Shape Averaging and Shape Interpolation.
Proceedings of the Computer Vision and Mathematical Methods in Medical and Biomedical Image Analysis, 2004

Registration of Diffusion Tensor Images.
Proceedings of the 2004 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2004), with CD-ROM, 27 June, 2004

Two--level MRF Models for Image Restoration and Segmentation.
Proceedings of the British Machine Vision Conference, 2004

2003
Characterization of sexual dimorphism in the human corpus callosum.
NeuroImage, 2003

Bayesian model for intensity mapping in magnetic resonance image registration.
J. Electronic Imaging, 2003

Guest Editorial: Special Section on Model-based Medical Image Processing and Analysis.
J. Electronic Imaging, 2003

Point similarity measures for non-rigid registration of multi-modal data.
Comput. Vis. Image Underst., 2003

Formulation and Evaluation of Variational Curve Matching with Prior Constraints.
Proceedings of the Biomedical Image Registration, Second International Workshop, 2003

Continuous Curve Matching with Scale-Space Curvature and Extrema-Based Scale Selection.
Proceedings of the Scale Space Methods in Computer Vision, 4th International Conference, 2003

Two algorithms for non-rigid image registration and their evaluation.
Proceedings of the Medical Imaging 2003: Image Processing, 2003

Tensor scale-based image registration.
Proceedings of the Medical Imaging 2003: Image Processing, 2003

A method for non-rigid registration of diffusion tensor magnetic resonance images.
Proceedings of the Medical Imaging 2003: Image Processing, 2003

Characterization of Brain Plasticity in Schizophrenia Using Template Deformation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

The Shape Operator for Differential Analysis of Images.
Proceedings of the Information Processing in Medical Imaging, 2003

A New Algorithm for Generating Quadrilateral Meshes and its Application to FE-Based Image Registration.
Proceedings of the 12th International Meshing Roundtable, 2003

2002
Sexual Dimorphism in the Corpus Callosum: A Characterization of Local Size Variations and a Classification Driven Approach to Morphometry.
NeuroImage, 2002

The Neural Basis for Category-Specific Knowledge: An fMRI Study.
NeuroImage, 2002

Age-Related Changes in Working Memory during Sentence Comprehension: An fMRI Study.
NeuroImage, 2002

Substructural Segmentation Based on Regional Shape Differences.
Proceedings of the 15th Brazilian Symposium on Computer Graphics and Image Processing (SIBGRAPI 2002), 2002

Validation of a nonrigid registration algorithm for multimodal data.
Proceedings of the Medical Imaging 2002: Image Processing, 2002

Novel spatial interaction prior for Bayesian image segmentation and restoration.
Proceedings of the Medical Imaging 2002: Image Processing, 2002

Method for quantitative assessment of atherosclerotic lesion burden on the basis of high-resolution black-blood MRI.
Proceedings of the Medical Imaging 2002: Image Processing, 2002

Soft parametric curve matching in scale-space.
Proceedings of the Medical Imaging 2002: Image Processing, 2002

Efficient Partial Volume Tissue Classification in MRI Scans.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Using Voxel-Based Morphometry to Examine Atrophy-Behavior Correlates in Alzheimer's Disease and Frontotemporal Dementia.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Characterization of Regional Pulmonary Mechanics from Serial MRI Data.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

Registration patterns: the generic framework for image registration of the insight toolkit.
Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

Non-rigid registration of diffusion tensor MR images.
Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

Robust rotations between anatomical curves.
Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

Image Segmentation by Flexible Models Based on Robust Regularized Networks.
Proceedings of the Computer Vision, 2002

Shape Characterization of the Corpus Callosum in Schizophrenia Using Template Deformation.
Proceedings of the AMIA 2002, 2002

2001
Spatial Transformations of Diffusion Tensor Magnetic Resonance Images.
IEEE Trans. Medical Imaging, 2001

Characterizing populations and searching for diagnostics via elastic registration of MRI images.
Proceedings of the Medical Imaging 2001: Image Processing, 2001

Segmentation of cerebral MRI scans using a partial volume model, shading correction, and an anatomical prior.
Proceedings of the Medical Imaging 2001: Image Processing, 2001

Factor analysis of high-dimensional heterogeneous data for structural characterization.
Proceedings of the Medical Imaging 2001: Image Processing, 2001

Validation of brain segmentation and tissue classification algorithm for T1-weighted MR images.
Proceedings of the Medical Imaging 2001: Image Processing, 2001

Computing Match Functions for Curves in R<sup>2</sup> and R<sup>3</sup> by Refining Polyline Approximations.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

Using a Linear Diagnostic Function and Non-rigid Registration to Search for Morphological Differences Between Populations: An Example Involving the Male and Female Corpus Callosum.
Proceedings of the Information Processing in Medical Imaging, 2001

Partial Volume Segmentation of Cerebral MRI Scans with Mixture Model Clustering.
Proceedings of the Information Processing in Medical Imaging, 2001

2000
Elastic Matching of Diffusion Tensor Images.
Comput. Vis. Image Underst., 2000

Probabilistic Intensity Mapping in MRI Image Registration.
Proceedings of the 13th Brazilian Symposium on Computer Graphics and Image Processing (SIBGRAPI 2000), 2000

Exploratory and confirmatory factor analysis in morphometry.
Proceedings of the Medical Imaging 2000: Image Processing, 2000

Performance evaluation of medical image processing algorithms.
Proceedings of the Medical Imaging 2000: Image Processing, 2000

Techniques for spatial normalization of diffusion tensor images.
Proceedings of the Medical Imaging 2000: Image Processing, 2000

1999
On matching brain volumes.
Pattern Recognit., 1999

Likelihood estimation in image warping.
Proceedings of the Medical Imaging 1999: Image Processing, 1999

New experimental results in atlas-based brain morphometry.
Proceedings of the Medical Imaging 1999: Image Processing, 1999

Exploratory Factor Analysis in Morphometry.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

Strategies for Data Reorientation during Non-rigid Warps of Diffusion Tensor Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

Method for Estimating the Intensity Mapping between MRI Images.
Proceedings of the Information Processing in Medical Imaging, 1999

Elastic Matching of Diffusion Tensor MRIs.
Proceedings of the 1999 Conference on Computer Vision and Pattern Recognition (CVPR '99), 1999

Similarity Measures for Matching Diffusion Tensor Images.
Proceedings of the British Machine Vision Conference 1999, 1999

1998
Density estimation for MR image elastic matching.
Proceedings of the XI Computer Graphics, 1998

Atlas warping for brain morphometry.
Proceedings of the Medical Imaging 1998: Image Processing, 1998

1997
Design of a Statistical Model of Brain Shape.
Proceedings of the Information Processing in Medical Imaging, 1997

Advances in elastic matching theory and its implementation.
Proceedings of the CVRMed-MRCAS'97, 1997

1996
Rapid coarse-to-fine matching using scale-specific priors.
Proceedings of the Medical Imaging 1996: Image Processing, 1996

1994
Matching structural images of the human brain using statistical and geometrical image features.
Proceedings of the Visualization in Biomedical Computing 1994, 1994

1993
User Interface Design for Medical Imaging Workstations: Image Display and Processing.
Interact. Comput., 1993


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