James Arram

According to our database, James Arram authored at least 9 papers between 2013 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

GeDi: applying suffix arrays to increase the repertoire of detectable SNVs in tumour genomes.

Izaak Coleman, Giacomo Corleone, James Arram, Ho-Cheung Ng, Luca Magnani, Wayne Luk

BMC Bioinform., 2020

2017

FPGA acceleration of DNA sequencing analysis and storage.

James Arram

PhD thesis, 2017

Leveraging FPGAs for Accelerating Short Read Alignment.

James Arram, Thomas Kaplan, Wayne Luk, Peiyong Jiang

IEEE ACM Trans. Comput. Biol. Bioinform., 2017

dfesnippets: An Open-Source Library for Dataflow Acceleration on FPGAs.

Paul Grigoras, Pavel Burovskiy, James Arram, Xinyu Niu, Kit Cheung, Junyi Xie, Wayne Luk

Proceedings of the Applied Reconfigurable Computing - 13th International Symposium, 2017

2015

FPGA acceleration of reference-based compression for genomic data.

James Arram, Moritz Pflanzer, Thomas Kaplan, Wayne Luk

Proceedings of the 2015 International Conference on Field Programmable Technology, 2015

Ramethy: Reconfigurable Acceleration of Bisulfite Sequence Alignment.

James Arram, Wayne Luk, Peiyong Jiang

Proceedings of the 2015 ACM/SIGDA International Symposium on Field-Programmable Gate Arrays, 2015

2013

Reconfigurable filtered acceleration of short read alignment.

James Arram, Wayne Luk, Peiyong Jiang

Proceedings of the 2013 International Conference on Field-Programmable Technology, 2013

Reconfigurable Acceleration of Short Read Mapping.

James Arram, Kuen Hung Tsoi, Wayne Luk, Peiyong Jiang

Proceedings of the 21st IEEE Annual International Symposium on Field-Programmable Custom Computing Machines, 2013

Hardware Acceleration of Genetic Sequence Alignment.

James Arram, Kuen Hung Tsoi, Wayne Luk, Peiyong Jiang

Proceedings of the Reconfigurable Computing: Architectures, Tools and Applications, 2013