Jakub Truszkowski

According to our database, Jakub Truszkowski authored at least 18 papers between 2010 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2021

Learning partial correlation graphs and graphical models by covariance queries.

Gábor Lugosi, Jakub Truszkowski, Vasiliki Velona, Piotr Zwiernik

J. Mach. Learn. Res., 2021

A phylogenetic approach for weighting genetic sequences.

Nicola De Maio, Alexander V. Alekseyenko, William J. Coleman-Smith, Fabio Pardi, Marc A. Suchard, Asif U. Tamuri, Jakub Truszkowski, Nick Goldman

BMC Bioinform., 2021

2020

Computing the probability of gene trees concordant with the species tree in the multispecies coalescent.

Jakub Truszkowski, Céline Scornavacca, Fabio Pardi

CoRR, 2020

Unsupervised Multilingual Alignment using Wasserstein Barycenter.

Xin Lian, Kshitij Jain, Jakub Truszkowski, Pascal Poupart, Yaoliang Yu

Proceedings of the Twenty-Ninth International Joint Conference on Artificial Intelligence, 2020

2019

Structure learning in graphical models by covariance queries.

Gábor Lugosi, Jakub Truszkowski, Vasiliki Velona, Piotr Zwiernik

CoRR, 2019

Rapidly Computing the Phylogenetic Transfer Index.

Jakub Truszkowski, Olivier Gascuel, Krister M. Swenson

Proceedings of the 19th International Workshop on Algorithms in Bioinformatics, 2019

2016

Distance-Based Phylogeny Reconstruction: Safety and Edge Radius.

Olivier Gascuel, Fabio Pardi, Jakub Truszkowski

Encyclopedia of Algorithms, 2016

2013

Fast Algorithms for Large-Scale Phylogenetic Reconstruction.

Jakub Truszkowski

PhD thesis, 2013

Fast error-tolerant quartet phylogeny algorithms.

Daniel G. Brown, Jakub Truszkowski

Theor. Comput. Sci., 2013

LSHPlace: Fast Phylogenetic Placement Using Locality-Sensitive Hashing.

Daniel G. Brown, Jakub Truszkowski

Proceedings of the Biocomputing 2013: Proceedings of the Pacific Symposium, 2013

2012

PANDAseq: paired-end assembler for illumina sequences.

Andre P. Masella, Andrea K. Bartram, Jakub Truszkowski, Daniel Gregory Brown, Josh D. Neufeld

BMC Bioinform., 2012

Towards a practical O(n log n) phylogeny algorithm.

Jakub Truszkowski, Yanqi Hao, Daniel G. Brown

Algorithms Mol. Biol., 2012

Fast Phylogenetic Tree Reconstruction Using Locality-Sensitive Hashing.

Daniel Gregory Brown, Jakub Truszkowski

Proceedings of the Algorithms in Bioinformatics - 12th International Workshop, 2012

2011

Fast reconstruction of phylogenetic trees using locally-sensitive hashing

Daniel G. Brown, Jakub Truszkowski

CoRR, 2011

More accurate recombination prediction in HIV-1 using a robust decoding algorithm for HMMs.

Jakub Truszkowski, Daniel Gregory Brown

BMC Bioinform., 2011

Towards a Practical O(n logn) Phylogeny Algorithm.

Daniel G. Brown, Jakub Truszkowski

Proceedings of the Algorithms in Bioinformatics - 11th International Workshop, 2011

2010

New decoding algorithms for Hidden Markov Models using distance measures on labellings.

Daniel G. Brown, Jakub Truszkowski

BMC Bioinform., 2010

Comparative Analysis of Probabilistic Models for Activity Recognition with an Instrumented Walker.

Farheen Omar, Mathieu Sinn, Jakub Truszkowski, Pascal Poupart, James Yungjen Tung, Allen Caine

Proceedings of the UAI 2010, 2010