Ivelin Georgiev

According to our database, Ivelin Georgiev authored at least 15 papers between 2006 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

Prediction of VRC01 neutralization sensitivity by HIV-1 gp160 sequence features.

Craig A. Magaret, David C. Benkeser, Brian D. Williamson, Bhavesh Borate, Lindsay N. Carpp, Ivelin S. Georgiev, Ian Setliff, Adam S. Dingens, Noah Simon, Marco Carone, Christopher Simpkins, David C. Montefiori, Galit Alter, Wen-Han Yu, Michal Juraska, Paul Thatcher Edlefsen, Shelly Karuna, Nyaradzo M. Mgodi, Srilatha Edugupanti, Peter B. Gilbert

PLoS Comput. Biol., 2019

NFPws: a web server for delineating broadly neutralizing antibody specificities from serum HIV-1 neutralization data.

Nagarajan Raju, Ian Setliff, Ivelin S. Georgiev

Bioinform., 2019

2017

A critical analysis of computational protein design with sparse residue interaction graphs.

Swati Jain, Jonathan D. Jou, Ivelin S. Georgiev, Bruce Randall Donald

PLoS Comput. Biol., 2017

2016

BWM*: A Novel, Provable, Ensemble-based Dynamic Programming Algorithm for Sparse Approximations of Computational Protein Design.

Jonathan D. Jou, Swati Jain, Ivelin Georgiev, Bruce Randall Donald

J. Comput. Biol., 2016

2015

: Comprehensive Sieve Analysis of Breakthrough HIV-1 Sequences in the RV144 Vaccine Efficacy Trial.

Paul Thatcher Edlefsen, Morgane Rolland, Tomer Hertz, Sodsai Tovanabutra, Andrew J. Gartland, Allan C. deCamp, Craig A. Magaret, Hasan Ahmed, Raphael Gottardo, Michal Juraska, Connor McCoy, Brendan B. Larsen, Eric Sanders-Buell, Chris Carrico, Sergey Menis, Meera Bose, Miguel A. Arroyo, Robert J. O'Connell, Sorachai Nitayaphan, Punnee Pitisuttithum, Jaranit Kaewkungwal, Supachai Rerks-Ngarm, Merlin L. Robb, Tatsiana Kirys, Ivelin Georgiev, Peter D. Kwong, Konrad Scheffler, Sergei L. Kosakovsky Pond, Jonathan M. Carlson, Nelson Michael, William R. Schief, James I. Mullins, Jerome H. Kim, Peter B. Gilbert

PLoS Comput. Biol., 2015

2014

Structure and immune recognition of trimeric pre-fusion HIV-1 Env.

Marie Pancera, Tongqing Zhou, Aliaksandr Druz, Ivelin S. Georgiev, Cinque S. Soto, Jason Gorman, Jinghe Huang, Priyamvada Acharya, Gwo-Yu Chuang, Gilad Ofek, Guillaume B. E. Stewart-Jones, Jonathan Stuckey, Robert T. Bailer, M. Gordon Joyce, Mark K. Louder, Nancy Tumba, Yongping Yang, Baoshan Zhang, Myron S. Cohen, Barton F. Haynes, John R. Mascola, Lynn Morris, James B. Munro, Scott C. Blanchard, Walther Mothes, Mark Connors, Peter D. Kwong

Nat., 2014

NEP: web server for epitope prediction based on antibody neutralization of viral strains with diverse sequences.

Gwo-Yu Chuang, David Liou, Peter D. Kwong, Ivelin Georgiev

Nucleic Acids Res., 2014

2012

The Role of Local Backrub Motions in Evolved and Designed Mutations.

Daniel A. Keedy, Ivelin Georgiev, Edward B. Triplett, Bruce Randall Donald, David C. Richardson, Jane S. Richardson

PLoS Comput. Biol., 2012

Computational prediction of N-linked glycosylation incorporating structural properties and patterns.

Gwo-Yu Chuang, Jeffrey C. Boyington, M. Gordon Joyce, Jiang Zhu, Gary J. Nabel, Peter D. Kwong, Ivelin Georgiev

Bioinform., 2012

2009

Novel Algorithms for Computational Protein Design, with Applications to Enzyme Redesign and Small-Molecule Inhibitor Design.

Ivelin S. Georgiev

PhD thesis, 2009

2008

The minimized dead-end elimination criterion and its application to protein redesign in a hybrid scoring and search algorithm for computing partition functions over molecular ensembles.

Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald

J. Comput. Chem., 2008

Algorithm for backrub motions in protein design.

Ivelin Georgiev, Daniel A. Keedy, Jane S. Richardson, David C. Richardson, Bruce Randall Donald

Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

2007

Dead-End Elimination with Backbone Flexibility.

Ivelin Georgiev, Bruce Randall Donald

Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007

2006

A Novel Minimized Dead-End Elimination Criterion and Its Application to Protein Redesign in a Hybrid Scoring and Search Algorithm for Computing Partition Functions over Molecular Ensembles.

Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald

Proceedings of the Research in Computational Molecular Biology, 2006

Improved Pruning algorithms and Divide-and-Conquer strategies for Dead-End Elimination, with application to protein design.

Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald

Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006