Isidore Rigoutsos

Rogan Magee

Aristeidis G. Telonis

Nucleic Acids Res., 2018

2017

Threshold-seq: a tool for determining the threshold in short RNA-seq datasets.

[BibT_eX]

[DOI]

Bioinform., 2017

2016

Consequential considerations when mapping tRNA fragments.

[BibT_eX]

[DOI]

Aristeidis G. Telonis

Yohei Kirino

BMC Bioinform., 2016

MINTbase: a framework for the interactive exploration of mitochondrial and nuclear tRNA fragments.

[BibT_eX]

[DOI]

Venetia Pliatsika

Aristeidis G. Telonis

Bioinform., 2016

2012

Interactive exploration of RNA22 microRNA target predictions.

[BibT_eX]

[DOI]

Bioinform., 2012

2010

Anchoring millions of distinct reads on the human genome within seconds.

[BibT_eX]

[DOI]

Tien Huynh

Michail Vlachos

Proceedings of the EDBT 2010, 2010

2009

Alu and B1 Repeats Have Been Selectively Retained in the Upstream and Intronic Regions of Genes of Specific Functional Classes.

[BibT_eX]

[DOI]

Aristotelis Tsirigos

PLoS Comput. Biol., 2009

2006

Data mining and clinical data repositories: Insights from a 667, 000 patient data set.

[BibT_eX]

[DOI]

Comput. Biol. Medicine, 2006

A generic motif discovery algorithm for sequential data.

[BibT_eX]

[DOI]

Kyle L. Jensen

Mark P. Styczynski

Gregory Stephanopoulos

Bioinform., 2006

2004

Report on BIOKDD04: workshop on data mining in Bioinformatics.

[BibT_eX]

[DOI]

Mohammed Javeed Zaki

Shinichi Morishita

SIGKDD Explor., 2004

The web server of IBM's Bioinformatics and Pattern Discovery group: 2004 update.

[BibT_eX]

[DOI]

Tien Huynh

Nucleic Acids Res., 2004

Of parts and relationships: an unending quest.

[BibT_eX]

[DOI]

Proceedings of the 2004 ACM CIKM International Conference on Information and Knowledge Management, 2004

Chung-Kwei: a Pattern-discovery-based System for the Automatic Identification of Unsolicited E-mail Messages (SPAM).

[BibT_eX]

[DOI]

Tien Huynh

Proceedings of the CEAS 2004, 2004

2003

The web server of IBM's Bioinformatics and Pattern Discovery group.

[BibT_eX]

[DOI]

Nucleic Acids Res., 2003

Evaluation of annotation strategies using an entire genome sequence.

[BibT_eX]

[DOI]

Bioinform., 2003

2002

Finding Patterns in Three-Dimensional Graphs: Algorithms and Applications to Scientific Data Mining.

[BibT_eX]

[DOI]

IEEE Trans. Knowl. Data Eng., 2002

2001

QSAR in grossly underdetermined systems: Opportunities and issues.

[BibT_eX]

[DOI]

IBM J. Res. Dev., 2001

DELPHI: A pattern-based method for detecting sequence similarity.

[BibT_eX]

[DOI]

IBM J. Res. Dev., 2001

An Output-Sensitive Flexible Pattern Discovery Algorithm.

[BibT_eX]

[DOI]

Laxmi Parida

Daniel E. Platt

Proceedings of the Combinatorial Pattern Matching, 12th Annual Symposium, 2001

2000

Pattern discovery on character sets and real-valued data: linear bound on irredundant motifs and an efficient polynomial time algorithm.

[BibT_eX]

[DOI]

Proceedings of the Eleventh Annual ACM-SIAM Symposium on Discrete Algorithms, 2000

Knowledge discovery in biological domains (tutorial AM-3).

[BibT_eX]

[DOI]

Igor Jurisica

Proceedings of the Tutorial notes of the sixth ACM SIGKDD international conference on Knowledge discovery and data mining, 2000

1999

An Approximation Algorithm for Alignment of Multiple Sequences using Motif Discovery.

[BibT_eX]

[DOI]

Laxmi Parida

J. Comb. Optim., 1999

Sequence homology detection through large scale pattern discovery.

[BibT_eX]

[DOI]

Proceedings of the Third Annual International Conference on Research in Computational Molecular Biology, 1999

Building Dictionaries of 1D and 3D Motifs by Mining the Unaligned 1D Sequences of 17 Archaeal and Bacterial Genomes.

[BibT_eX]

[DOI]

Proceedings of the Seventh International Conference on Intelligent Systems for Molecular Biology, 1999

Representation and Matching of Small Flexible Molecules in Large Databases of 3D Molecular Information.

[BibT_eX]

Proceedings of the Pattern Discovery in Biomolecular Data: Tools, 1999

1998

Managing Statistical Behavior of Large Data Sets in Shared-Nothing Architectures.

[BibT_eX]

[DOI]

Alex Delis

IEEE Trans. Parallel Distributed Syst., 1998

Combinatorial pattern discovery in biological sequences: The TEIRESIAS algorithm [published erratum appears in Bioinformatics 1998;14(2): 229].

[BibT_eX]

[DOI]

Bioinform., 1998

Motif discovery without alignment or enumeration (extended abstract).

[BibT_eX]

[DOI]

Proceedings of the Second Annual International Conference on Research in Computational Molecular Biology, 1998

Two-Dimensional Affine Invariants that Distribute Uniformly and can be Tuned to any Convex Feature Domain.

[BibT_eX]

[DOI]

Proceedings of the Sixth International Conference on Computer Vision (ICCV-98), 1998

Well-Behaved, Tunable 3D-Affine Invariants.

[BibT_eX]

[DOI]

Proceedings of the 1998 Conference on Computer Vision and Pattern Recognition (CVPR '98), 1998

1997

Automated Discovery of Active Motifs in Three Dimensional Molecules.

[BibT_eX]

[DOI]

Proceedings of the Third International Conference on Knowledge Discovery and Data Mining (KDD-97), 1997

1996

The Impact of Hashing Function Choice on the Load Balancing in Very Large Dartasets.

[BibT_eX]

Alex Delis

Proceedings of the 8th International Conference on Software Engineering and Knowledge Engineering, 1996

1995

A Bayesian Approach to Model Matching with Geometric Hashing.

[BibT_eX]

[DOI]

Robert A. Hummel

Comput. Vis. Image Underst., 1995

1993

Distributed Bayesian object recognition.

[BibT_eX]

[DOI]

Robert A. Hummel

Proceedings of the Conference on Computer Vision and Pattern Recognition, 1993

FLASH: a fast look-up algorithm for string homology.

[BibT_eX]

[DOI]

Andrea Califano

Proceedings of the Conference on Computer Vision and Pattern Recognition, 1993

1992

Massively Parallel Bayesian Object Recognition.

[BibT_eX]

[DOI]

PhD thesis, 1992

Massively Parallel Model Matching: Geometric Hashing on the Connection Machine.

[BibT_eX]

[DOI]

Robert A. Hummel

Computer, 1992

Visuo-Tactual Coarseness Estimation Tasks: Experiments and Modeling.

[BibT_eX]

[DOI]

Proceedings of the Advances in Machine Vision: Strategies and Applications, 1992

1991

An algorithm for point clustering and grid generation.

[BibT_eX]

[DOI]

Marsha J. Berger

IEEE Trans. Syst. Man Cybern., 1991

1986

Determining the 3-D Motion of a Rigid Surface Patch Without Correspondence under Perspective Projection.

[BibT_eX]

[DOI]

Yiannis Aloimonos