Isabel Sá-Correia

According to our database, Isabel Sá-Correia authored at least 12 papers between 2006 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

YEASTRACT+: a portal for the exploitation of global transcription regulation and metabolic model data in yeast biotechnology and pathogenesis.

Miguel Cacho Teixeira, Romeu Viana, Margarida Palma, Jorge Oliveira, Mónica Galocha, Marta Neves Mota, Diogo Couceiro, Maria Galhardas Pereira, Miguel Antunes, Inês V. Costa, Pedro Pais, Carolina Parada, Claudine Chaouiya, Isabel Sá-Correia, Pedro Tiago Monteiro

Nucleic Acids Res., January, 2023

2021

From a genome assembly to full regulatory network prediction: the case study of Rhodotorula toruloides putative Haa1-regulon.

Jorge Oliveira, Miguel Antunes, Cláudia P. Godinho, Miguel C. Teixeira, Isabel Sá-Correia, Pedro T. Monteiro

BMC Bioinform., 2021

2020

YEASTRACT+: a portal for cross-species comparative genomics of transcription regulation in yeasts.

Pedro T. Monteiro, Jorge Oliveira, Pedro Pais, Miguel Antunes, Margarida Palma, Mafalda Cavalheiro, Mónica Galocha, Cláudia P. Godinho, Luís C. Martins, Nuno Bourbon, Marta Neves Mota, Ricardo A. Ribeiro, Romeu Viana, Isabel Sá-Correia, Miguel C. Teixeira

Nucleic Acids Res., 2020

2018

YEASTRACT: an upgraded database for the analysis of transcription regulatory networks in Saccharomyces cerevisiae.

Miguel C. Teixeira, Pedro T. Monteiro, Margarida Palma, Catarina Costa, Cláudia P. Godinho, Pedro Pais, Mafalda Cavalheiro, Miguel Antunes, Alexandre Lemos, Tiago Pedreira, Isabel Sá-Correia

Nucleic Acids Res., 2018

2017

The PathoYeastract database: an information system for the analysis of gene and genomic transcription regulation in pathogenic yeasts.

Pedro Tiago Monteiro, Pedro Pais, Catarina Costa, Sauvagya Manna, Isabel Sá-Correia, Miguel Cacho Teixeira

Nucleic Acids Res., 2017

2014

The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in <i>Saccharomyces cerevisiae</i>.

Miguel Cacho Teixeira, Pedro Tiago Monteiro, Joana Fernandes Guerreiro, Joana Pinho Gonçalves, Nuno Pereira Mira, Sandra Costa dos Santos, Tânia Rodrigues Cabrito, Margarida Palma, Catarina Costa, Alexandre Paulo Francisco, Sara Cordeiro Madeira, Arlindo Limede Oliveira, Ana Teresa Freitas, Isabel Sá-Correia

Nucleic Acids Res., 2014

2011

YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in <i>Saccharomyces cerevisiae</i> through a web services interface.

Dário Abdulrehman, Pedro T. Monteiro, Miguel C. Teixeira, Nuno P. Mira, Artur B. Lourenço, Sandra Costa dos Santos, Tânia Rodrigues Cabrito, Alexandre P. Francisco, Sara C. Madeira, Ricardo Santos Aires, Arlindo L. Oliveira, Isabel Sá-Correia, Ana T. Freitas

Nucleic Acids Res., 2011

TFRank: network-based prioritization of regulatory associations underlying transcriptional responses.

Joana P. Gonçalves, Alexandre P. Francisco, Nuno P. Mira, Miguel C. Teixeira, Isabel Sá-Correia, Arlindo L. Oliveira, Sara C. Madeira

Bioinform., 2011

2010

Identification of Regulatory Modules in Time Series Gene Expression Data Using a Linear Time Biclustering Algorithm.

Sara C. Madeira, Miguel C. Teixeira, Isabel Sá-Correia, Arlindo L. Oliveira

IEEE ACM Trans. Comput. Biol. Bioinform., 2010

2008

YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in <i>Saccharomyces cerevisiae</i>.

Pedro T. Monteiro, Nuno D. Mendes, Miguel C. Teixeira, Sofia d'Orey, Sandra Tenreiro, Nuno P. Mira, Hélio Pais, Alexandre P. Francisco, Alexandra M. Carvalho, Artur B. Lourenço, Isabel Sá-Correia, Arlindo L. Oliveira, Ana T. Freitas

Nucleic Acids Res., 2008

2006

The YEASTRACT database: a tool for the analysis of transcription regulatory associations in <i>Saccharomyces cerevisiae</i>.

Miguel C. Teixeira, Pedro T. Monteiro, Pooja Jain, Sandra Tenreiro, Alexandra R. Fernandes, Nuno P. Mira, Marta Alenquer, Ana T. Freitas, Arlindo L. Oliveira, Isabel Sá-Correia

Nucleic Acids Res., 2006

MUSA: a parameter free algorithm for the identification of biologically significant motifs.

Nuno D. Mendes, Ana C. Casimiro, Pedro M. Santos, Isabel Sá-Correia, Arlindo L. Oliveira, Ana T. Freitas

Bioinform., 2006