Irena Roterman-Konieczna
Orcid: 0000-0003-3652-9099
According to our database1,
Irena Roterman-Konieczna
authored at least 95 papers
between 1995 and 2024.
Collaborative distances:
Collaborative distances:
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Bibliography
2024
Protein intrinsic disorder prediction using Attention U-Net and ProtTrans protein language model.
CoRR, 2024
The outer-membrane componentof the multi-drug efflux system -a structural analysis based onhydrophobicity distribution.
Bio Algorithms Med Syst., 2024
2023
Ab initio protein structure prediction: the necessary presence of external force field as it is delivered by Hsp40 chaperone.
BMC Bioinform., December, 2023
2022
Lightweight ProteinUnet2 network for protein secondary structure prediction: a step towards proper evaluation.
BMC Bioinform., 2022
2021
ProteinUnet - An efficient alternative to SPIDER3-single for sequence-based prediction of protein secondary structures.
J. Comput. Chem., 2021
Divergence Entropy-Based Evaluation of Hydrophobic Core in Aggressive and Resistant Forms of Transthyretin.
Entropy, 2021
2020
Symmetry, 2020
J. Comput. Sci., 2020
Bio Algorithms Med Syst., 2020
2019
Proceedings of the Machine Learning Paradigms - Advances in Data Analytics, 2019
Symmetry and Dissymmetry in Protein Structure - System-Coding Its Biological Specificity.
Symmetry, 2019
Structural analysis of the Aβ(11-42) amyloid fibril based on hydrophobicity distribution.
J. Comput. Aided Mol. Des., 2019
Backbone dihedral angles prediction servers for protein early-stage structure prediction.
Bio Algorithms Med Syst., 2019
Bio Algorithms Med Syst., 2019
Aggregation-promoting conditions necessary to create the complexes by acylphosphatase from the hyperthermophile Sulfolobus solfataricus.
Bio Algorithms Med Syst., 2019
2018
Comparison of the structure of Aβ(1-40) amyloid with the one in complex with polyphenol ε-viniferin glucoside (EVG).
Bio Algorithms Med Syst., 2018
Bio Algorithms Med Syst., 2018
Fragment Aβ(18-41) presented within the CDR3 loop region of a shark immunoglobulin new antigen receptor single-variable domain antibody analyzed based on the fuzzy oil drop model.
Bio Algorithms Med Syst., 2018
2017
Entropy, 2017
Chain-chain complexation and heme binding in haemoglobin with respect to the hydrophobic core structure.
Bio Algorithms Med Syst., 2017
Role of the hydrophobic core in cytoskeleton protein: cardiac myosin binding protein C.
Bio Algorithms Med Syst., 2017
Bio Algorithms Med Syst., 2017
Bio Algorithms Med Syst., 2017
Bio Algorithms Med Syst., 2017
2016
Influence of the Aqueous Environment on Protein Structure - A Plausible Hypothesis Concerning the Mechanism of Amyloidogenesis.
Entropy, 2016
Role of Disulfide Bonds in Stabilizing the Conformation of Selected Enzymes - An Approach Based on Divergence Entropy Applied to the Structure of Hydrophobic Core in Proteins.
Entropy, 2016
2015
Statistical dictionaries for hypothetical in silico model of the early-stage intermediate in protein folding.
J. Comput. Aided Mol. Des., 2015
Application of Divergence Entropy to Characterize the Structure of the Hydrophobic Core in DNA Interacting Proteins.
Entropy, 2015
Hydrophobic core structure of macromomycin - the apoprotein of the antitumor antibiotic auromomycin - fuzzy oil drop model applied.
Bio Algorithms Med Syst., 2015
Bio Algorithms Med Syst., 2015
Application of divergence entropy to characterize the structure of lipid-binding proteins.
Bio Algorithms Med Syst., 2015
The use of Titan yellow dye as a metal ion binding marker for studies on the formation of specific complexes by supramolecular Congo red.
Bio Algorithms Med Syst., 2015
2014
Speaker identification based on artificial neural networks. Case study: the Polish vowel (pilot study).
Bio Algorithms Med Syst., 2014
Bio Algorithms Med Syst., 2014
Bio Algorithms Med Syst., 2014
2013
Bio Algorithms Med Syst., 2013
A serious game - a new training addressing particularly prospective memory in the elderly.
Bio Algorithms Med Syst., 2013
2012
Expert Syst. J. Knowl. Eng., 2012
Bio Algorithms Med Syst., 2012
Measurement of Hydrophobicity Distribution in Proteins - Non-redundant Protein Data Bank.
Bio Algorithms Med Syst., 2012
Measurement of Hydrophobicity Distribution in Proteins - Complete Redundant Protein Data Bank.
Bio Algorithms Med Syst., 2012
Bio Algorithms Med Syst., 2012
Bio Algorithms Med Syst., 2012
Computations of Protein Hydrophobicity Profile as Virtual Experiment in Gridspace Virtual Laboratory.
Bio Algorithms Med Syst., 2012
Examining Protein Folding Process Simulation and Searching for Common Structure Motifs in a Protein Family as Experiments in the GridSpace2 Virtual Laboratory.
Proceedings of the Building a National Distributed e-Infrastructure - PL-Grid, 2012
2011
Catalytic residues in hydrolases: analysis of methods designed for ligand-binding site prediction.
J. Comput. Aided Mol. Des., 2011
Ab initio protein structure prediction - the hydrophobicity distribution analysis.
Bio Algorithms Med Syst., 2011
2010
Editorial note.
Bio Algorithms Med Syst., 2010
Automatic Classification of Protein Structures based on Genetic Algorithm alignment of the Hydrophobicity Difference Profiles obtained from the Fuzzy Oil Drop Model.
Bio Algorithms Med Syst., 2010
In silico "Game" between the patient and his/her disease.
Bio Algorithms Med Syst., 2010
Internal force field in protein molecule.
Bio Algorithms Med Syst., 2010
Forty years of medical informatics in Medical Academy (currently) Jagiellonian University - Medical College (JU CM).
Bio Algorithms Med Syst., 2010
Identification of protein-protein complexation area.
Bio Algorithms Med Syst., 2010
An Efficient Multi-class Support Vector Machine Classifier for Protein Fold Recognition.
Proceedings of the Advances in Bioinformatics, 2010
2009
Entropy, 2009
The XV century patients (as presented on Wit Stwosz altar) diagnozed.
Bio Algorithms Med Syst., 2009
Chemical pathways - visualisation of classical analytical procedures in chemistry by the use of flow charts.
Bio Algorithms Med Syst., 2009
Unfolding simulation to verify the concept of limited conformational sub-space for early-stage intermediate.
Bio Algorithms Med Syst., 2009
Male portrait head.
Bio Algorithms Med Syst., 2009
2008
Advanced measurement of saccadic eye movements - study of invariable and significant physiological features.
Bio Algorithms Med Syst., 2008
The influence of coffee on an eyeball movement.
Bio Algorithms Med Syst., 2008
Association between the N-acetylation genetic polymorphism and aspirin-induced urticartia.
Bio Algorithms Med Syst., 2008
Ligands database.
Bio Algorithms Med Syst., 2008
2007
PLoS Comput. Biol., 2007
Int. J. Bioinform. Res. Appl., 2007
Mathematical Oncology - What is it?
Bio Algorithms Med Syst., 2007
Massive identification of similarities in DNA materials organized in Grid environment.
Bio Algorithms Med Syst., 2007
An approach to protein folding on the grid - EUChinaGrid experience.
Bio Algorithms Med Syst., 2007
2006
Comput. Biol. Chem., 2006
Application of cryptography in cardiologic teleconsultation.
Bio Algorithms Med Syst., 2006
Protein complexes with supramolecular ligands formed and revealed in two-dimensional electrophoresis. The search for computer analysis of results.
Bio Algorithms Med Syst., 2006
Grid systems and their applications to biomedical science.
Bio Algorithms Med Syst., 2006
A multi-path computer-based examination system for students of medicine.
Bio Algorithms Med Syst., 2006
E-learning as a new tool in medicine teaching on the example of an introductory statistics course.
Bio Algorithms Med Syst., 2006
Specific supramolecular ligands with proteins. Possible practical application.
Bio Algorithms Med Syst., 2006
The ligand database server.
Bio Algorithms Med Syst., 2006
2004
J. Comput. Aided Mol. Des., 2004
Bioinform., 2004
2003
2000
Why do Congo Red, Evans Blue, and Trypan Blue differ in their complexation properties?
J. Comput. Chem., 2000
Comput. Chem., 2000
1998
Congo Red Bound to -1-Proteinase Inhibitor As a Model of Supramolecular Ligand and Protein Complex.
Comput. Chem., 1998
1995
Geometrical Analysis of Structural Changes in Immunoglobulin Domains' Transition From Native to Molten State.
Comput. Chem., 1995