Ilya Nemenman

According to our database, Ilya Nemenman authored at least 30 papers between 2000 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

Data Efficiency, Dimensionality Reduction, and the Generalized Symmetric Information Bottleneck.

K. Michael Martini, Ilya Nemenman

Neural Comput., 2024

2023

Learning force laws in many-body systems.

Wentao Yu, Eslam Abdelaleem, Ilya Nemenman, Justin C. Burton

CoRR, 2023

Deep Variational Multivariate Information Bottleneck - A Framework for Variational Losses.

Eslam Abdelaleem, Ilya Nemenman, K. Michael Martini

CoRR, 2023

Bayesian estimation of the Kullback-Leibler divergence for categorical sytems using mixtures of Dirichlet priors.

Francesco Camaglia, Ilya Nemenman, Thierry Mora, Aleksandra M. Walczak

CoRR, 2023

Inferring Local Structure from Pairwise Correlations.

Mahajabin Rahman, Ilya Nemenman

CoRR, 2023

Intrinsic Motivation in Dynamical Control Systems.

Stas Tiomkin, Ilya Nemenman, Daniel Polani, Naftali Tishby

CoRR, 2023

2022

Constrained brain volume in an efficient coding model explains the fraction of excitatory and inhibitory neurons in sensory cortices.

Arish Alreja, Ilya Nemenman, Christopher J. Rozell

PLoS Comput. Biol., 2022

Low probability states, data statistics, and entropy estimation.

Damián G. Hernández, Ahmed Roman, Ilya Nemenman

CoRR, 2022

2021

Inferring phenomenological models of first passage processes.

Catalina Rivera, David Hofmann, Ilya Nemenman

PLoS Comput. Biol., 2021

2020

Randomly connected networks generate emergent selectivity and predict decoding properties of large populations of neurons.

Audrey J. Sederberg, Ilya Nemenman

PLoS Comput. Biol., 2020

2019

Thermodynamic Computing.

Tom Conte, Erik DeBenedictis, Natesh Ganesh, Todd Hylton, John Paul Strachan, R. Stanley Williams, Alexander A. Alemi, Lee Altenberg, Gavin E. Crooks, James P. Crutchfield, Lídia del Rio, Josh Deutsch, Michael Robert DeWeese, Khari Douglas, Massimiliano Esposito, Michael P. Frank, Robert Fry, Peter Harsha, Mark D. Hill, Christopher T. Kello, Jeff Krichmar, Suhas Kumar, Shih-Chii Liu, Seth Lloyd, Matteo Marsili, Ilya Nemenman, Alex Nugent, Norman H. Packard, Dana Randall, Peter Sadowski, Narayana Santhanam, Robert Shaw, Adam Z. Stieg, Elan Stopnitzky, Christof Teuscher, Chris Watkins, David H. Wolpert, J. Joshua Yang, Yan Yufik

CoRR, 2019

2017

Simple biochemical networks allow accurate sensing of multiple ligands with a single receptor.

Vijay Singh, Ilya Nemenman

PLoS Comput. Biol., 2017

Growth of bacteria in 3-d colonies.

Xinxian Shao, Andrew Mugler, Justin Kim, Ha Jun Jeong, Bruce R. Levin, Ilya Nemenman

PLoS Comput. Biol., 2017

2016

Stereotypical Escape Behavior in Caenorhabditis elegans Allows Quantification of Effective Heat Stimulus Level.

Kawai Leung, Aylia Mohammadi, William S. Ryu, Ilya Nemenman

PLoS Comput. Biol., 2016

2013

Continuum dynamics model of the primary visual cortex for contour detection.

Vijay Singh, Martin Tchernookov, Rebecca Butterfield, Ilya Nemenman

CoRR, 2013

2011

Model Cortical Association Fields Account for the Time Course and Dependence on Target Complexity of Human Contour Perception.

Vadas Gintautas, Michael I. Ham, Benjamin Kunsberg, Shawn Barr, Steven P. Brumby, Craig Rasmussen, John S. George, Ilya Nemenman, Luís M. A. Bettencourt, Garrett T. Kenyon

PLoS Comput. Biol., 2011

Mass Conservation and Inference of Metabolic Networks from High-Throughput Mass Spectrometry Data.

Pradeep Bandaru, Mukesh Bansal, Ilya Nemenman

J. Comput. Biol., 2011

Coincidences and Estimation of Entropies of Random Variables with Large Cardinalities.

Ilya Nemenman

Entropy, 2011

2009

Adiabatic coarse-graining and simulations of stochastic biochemical networks.

Nikolai Sinitsyn, Nicolas W. Hengartner, Ilya Nemenman

Proc. Natl. Acad. Sci. USA, 2009

2008

Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution.

Ilya Nemenman, Geoffrey D. Lewen, William Bialek, Robert R. de Ruyter van Steveninck

PLoS Comput. Biol., 2008

2006

ARACNE: An Algorithm for the Reconstruction of Gene Regulatory Networks in a Mammalian Cellular Context.

Adam A. Margolin, Ilya Nemenman, Katia Basso, Chris Wiggins, Gustavo Stolovitzky, Riccardo Dalla Favera, Andrea Califano

BMC Bioinform., 2006

Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes.

Kai Wang, Ilya Nemenman, Nilanjana Banerjee, Adam A. Margolin, Andrea Califano

Proceedings of the Research in Computational Molecular Biology, 2006

2005

Fluctuation-Dissipation Theorem and Models of Learning.

Ilya Nemenman

Neural Comput., 2005

2004

Information theory, multivariate dependence, and genetic network inference

Ilya Nemenman

CoRR, 2004

How is sensory information processed?

Ilya Nemenman

CoRR, 2004

2001

Predictability, Complexity, and Learning.

William Bialek, Ilya Nemenman, Naftali Tishby

Neural Comput., 2001

Entropy and Inference, Revisited.

Ilya Nemenman, F. Shafee, William Bialek

Proceedings of the Advances in Neural Information Processing Systems 14 [Neural Information Processing Systems: Natural and Synthetic, 2001

2000

Information theory and learning: a physical approach

Ilya Nemenman

CoRR, 2000

Occam factors and model-independent Bayesian learning of continuous distributions

Ilya Nemenman, William Bialek

CoRR, 2000

Learning Continuous Distributions: Simulations With Field Theoretic Priors.

Ilya Nemenman, William Bialek

Proceedings of the Advances in Neural Information Processing Systems 13, 2000