Igor Mandric

According to our database, Igor Mandric authored at least 9 papers between 2014 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

Pipeline for Analyzing Activity of Metabolic Pathways in Planktonic Communities Using Metatranscriptomic Data.

Filipp Rondel, Roya Hosseini, Bikram Sahoo, Sergey Knyazev, Igor Mandric, Frank Stewart, Ion I. Mandoiu, Bogdan Pasaniuc, Yuri Porozov, Alexander Zelikovsky

J. Comput. Biol., 2021

2020

Estimating Enzyme Participation in Metabolic Pathways for Microbial Communities from RNA-seq Data.

Filipp Rondel, Akram Sadat Hosseini, Bikram Sahoo, Sergey Knyazev, Igor Mandric, Frank Stewart, Ion I. Mandoiu, Bogdan Pasaniuc, Alex Zelikovsky

Proceedings of the Bioinformatics Research and Applications - 16th International Symposium, 2020

Benchmarking of computational error-correction methods for next-generation sequencing data.

Keith Mitchell, Jaqueline J. Brito, Igor Mandric, Qiaozhen Wu, Sergey Knyazev, Sei Chang, Lana S. Martin, Aaron Karlsberg, Ekaterina Gerasimov, Russell Littman, Brian L. Hill, Nicholas C. Wu, Harry (Taegyun) Yang, Kevin Hsieh, Linus Chen, Eli Littman, Taylor Shabani, German Enik, Douglas Yao, Ren Sun, Jan Schroeder, Eleazar Eskin, Alex Zelikovsky, Pavel Skums, Mihai Pop, Serghei Mangul

Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020

2018

QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data.

Pavel Skums, Alex Zelikovsky, Rahul Singh, Walker Gussler, Zoya Dimitrova, Sergey Knyazev, Igor Mandric, Sumathi Ramachandran, David S. Campo, Deeptanshu Jha, Leonid Bunimovich, Elizabeth Costenbader, Connie Sexton, Siobhán O'Connor, Guo-liang Xia, Yury Khudyakov

Bioinform., 2018

Repeat-aware evaluation of scaffolding tools.

Igor Mandric, Sergey Knyazev, Alex Zelikovsky

Bioinform., 2018

2017

Fast bootstrapping-based estimation of confidence intervals of expression levels and differential expression from RNA-Seq data.

Igor Mandric, Yvette Temate-Tiagueu, Tatiana Shcheglova, Sahar Al Seesi, Alex Zelikovsky, Ion I. Mandoiu

Bioinform., 2017

Metabolic Analysis of Metatranscriptomic Data from Planktonic Communities.

Igor Mandric, Sergey Knyazev, Cory Padilla, Frank Stewart, Ion I. Mandoiu, Alex Zelikovsky

Proceedings of the Bioinformatics Research and Applications - 13th International Symposium, 2017

2015

ScaffMatch: scaffolding algorithm based on maximum weight matching.

Igor Mandric, Alex Zelikovsky

Bioinform., 2015

2014

SILP3: Maximum likelihood approach to scaffolding.

Igor Mandric, James Lindsay, Ion I. Mandoiu, Alex Zelikovsky

Proceedings of the IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, 2014