Hugues Richard

According to our database, Hugues Richard authored at least 14 papers between 2002 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

CovRadar: continuously tracking and filtering SARS-CoV-2 mutations for genomic surveillance.

Alice Wittig, Fábio Miranda, Martin Hölzer, Tom Altenburg, Jakub M. Bartoszewicz, Sebastian Beyvers, Marius A. Dieckmann, Ulrich Genske, Sven H. Giese, Melania Nowicka, Hugues Richard, Henning Schiebenhoefer, Anna-Juliane Schmachtenberg, Paul Sieben, Ming Tang, Julius Tembrockhaus, Bernhard Y. Renard, Stephan Fuchs

Bioinform., 2022

Statistical methods for analysing high throughput sequencing data. (Méthodes statistiques pour l'analyse des données de séquençage à haut débit).

Hugues Richard

, 2022

2020

Targeted domain assembly for fast functional profiling of metagenomic datasets with S3A.

Laurent David, Riccardo Vicedomini, Hugues Richard, Alessandra Carbone

Bioinform., 2020

2018

Meet-U: Educating through research immersion.

Nika Abdollahi, Alexandre Albani, Éric Anthony, Agnes Baud, Mélissa Cardon, Robert Clerc, Dariusz Czernecki, Romain Conte, Laurent David, Agathe Delaune, Samia Djerroud, Pauline Fourgoux, Nadège Guiglielmoni, Jeanne Laurentie, Nathalie Lehmann, Camille Lochard, Rémi Montagne, Vasiliki Myrodia, Vaitea Opuu, Elise Parey, Lélia Polit, Sylvain Privé, Chloé Quignot, Maria Ruiz-Cuevas, Mariam Sissoko, Nicolas Sompairac, Audrey Vallerix, Violaine Verrecchia, Marc Delarue, Raphaël Guérois, Yann Ponty, Sophie Sacquin-Mora, Alessandra Carbone, Christine Froidevaux, Stéphane Le Crom, Olivier Lespinet, Martin Weigt, Samer Abboud, Juliana S. Bernardes, Guillaume Bouvier, Chloé Dequeker, Arnaud Ferré, Patrick Fuchs, Gaëlle Lelandais, Pierre Poulain, Hugues Richard, Hugo Schweke, Elodie Laine, Anne Lopes

PLoS Comput. Biol., 2018

DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data.

Chadi Saad, Laurent Noé, Hugues Richard, Julie Leclerc, Marie-Pierre Buisine, Hélène Touzet, Martin Figeac

BMC Bioinform., 2018

2017

DNA-Seq Error Correction Based on Substring Indices.

David Weese, Marcel H. Schulz, Hugues Richard

Proceedings of the Algorithms for Next-Generation Sequencing Data, Techniques, 2017

2015

Ulysses: accurate detection of low-frequency structural variations in large insert-size sequencing libraries.

Alexandre Gillet-Markowska, Hugues Richard, Gilles Fischer, Ingrid Lafontaine

Bioinform., 2015

2014

Fiona: a parallel and automatic strategy for read error correction.

Marcel H. Schulz, David Weese, Manuel Holtgrewe, Viktoria Dimitrova, Sijia Niu, Knut Reinert, Hugues Richard

Bioinform., 2014

Parseq: reconstruction of microbial transcription landscape from RNA-Seq read counts using state-space models.

Bogdan Mirauta, Pierre Nicolas, Hugues Richard

Bioinform., 2014

2013

Pardiff: Inference of Differential Expression at Base-Pair Level from RNA-Seq Experiments.

Bogdan Mirauta, Pierre Nicolas, Hugues Richard

Proceedings of the New Trends in Image Analysis and Processing - ICIAP 2013, 2013

2005

seq++: analyzing biological sequences with a range of Markov-related models.

Vincent Miele, Pierre-Yves Bourguignon, David Robelin, Grégory Nuel, Hugues Richard

Bioinform., 2005

2003

SIC: a tool to detect short inverted segments in a biological sequence.

David Robelin, Hugues Richard, Bernard Prum

Nucleic Acids Res., 2003

SPA: simple web tool to assess statistical significance of DNA patterns.

Hugues Richard, Grégory Nuel

Nucleic Acids Res., 2003

2002

Occurrence Probability of Structured Motifs in Random Sequences.

Stéphane Robin, Jean-Jacques Daudin, Hugues Richard, Marie-France Sagot, Sophie Schbath

J. Comput. Biol., 2002