Huaiqiu Zhu

Orcid: 0000-0002-6376-218X

According to our database1, Huaiqiu Zhu authored at least 30 papers between 2004 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2023
Computer Simulation of Gene Knockout in Bacteria Accelerated by AI.
Proceedings of the 16th International Congress on Image and Signal Processing, 2023

2022
HoPhage: an ab initio tool for identifying hosts of phage fragments from metaviromes.
Bioinform., 2022

2021
LncADeep performance on full-length transcripts.
Nat. Mach. Intell., 2021

LightCUD: a program for diagnosing IBD based on human gut microbiome data.
BioData Min., 2021

AI-aided Data Mining in Gut Microbiome: The Road to Precision Medicine.
Proceedings of the 14th International Congress on Image and Signal Processing, 2021

2020
PlasGUN: gene prediction in plasmid metagenomic short reads using deep learning.
Bioinform., 2020

An Error Correction Method of Nanopore Sequencing Data Using Deep Learning.
Proceedings of the 13th International Congress on Image and Signal Processing, 2020

2019
How Microbes Shape Their Communities? A Microbial Community Model Based on Functional Genes.
Genom. Proteom. Bioinform., 2019

2018
LncADeep: an ab initio lncRNA identification and functional annotation tool based on deep learning.
Bioinform., 2018

Micro-Inversions In Human Cancer Genomes.
Proceedings of the 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2018

A Novel Compression Algorithm for High-Throughput DNA Sequence Based on Huffman Coding Method.
Proceedings of the 11th International Congress on Image and Signal Processing, 2018

2017
MetaComp: comprehensive analysis software for comparative meta-omics including comparative metagenomics.
BMC Bioinform., 2017

2016
Identifying micro-inversions using high-throughput sequencing reads.
BMC Genom., 2016

Examining the neural correlates of depressive and motor symptoms in Parkinson's disease using Frequency Component Analysis (FCA).
Proceedings of the Medical Imaging 2016: Biomedical Applications in Molecular, Structural, and Functional Imaging, San Diego, California, United States, 27 February, 2016

2015
InteMAP: Integrated metagenomic assembly pipeline for NGS short reads.
BMC Bioinform., 2015

2013
Gene prediction in metagenomic fragments based on the SVM algorithm.
BMC Bioinform., 2013

2012
A <i>de novo</i> metagenomic assembly program for shotgun DNA reads.
Bioinform., 2012

2011
A mutation degree model for the identification of transcriptional regulatory elements.
BMC Bioinform., 2011

Gene prediction in metagenomic fragments based on the SVM algorithm.
Proceedings of the 4th International Conference on Biomedical Engineering and Informatics, 2011

A de novo assembly method for metagenomic DNA reads with mate pairs.
Proceedings of the 4th International Conference on Biomedical Engineering and Informatics, 2011

2009
Prediction of translation initiation site for microbial genomes with TriTISA.
Bioinform., 2009

MetaTISA: Metagenomic Translation Initiation Site Annotator for improving gene start prediction.
Bioinform., 2009

2008
ProTISA: a comprehensive resource for translation initiation site annotation in prokaryotic genomes.
Nucleic Acids Res., 2008

A dynamic Bayesian network approach to protein secondary structure prediction.
BMC Bioinform., 2008

Computational evaluation of TIS annotation for prokaryotic genomes.
BMC Bioinform., 2008

2007
MED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes.
BMC Bioinform., 2007

Tree and rate estimation by local evaluation of heterochronous nucleotide data.
Bioinform., 2007

2004
Multivariate Entropy Distance Method for Prokaryotic Gene Identification.
J. Bioinform. Comput. Biol., 2004

Accuracy improvement for identifying translation initiation sites in microbial genomes.
Bioinform., 2004

Enrichment of transcriptional regulatory sites in non-coding genomic region.
Bioinform., 2004


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