Hongzhe Guo

According to our database, Hongzhe Guo authored at least 12 papers between 2016 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

SCancerRNA: Expression at the Single-cell Level and Interaction Resource of Non-coding RNA Biomarkers for Cancers.

Hongzhe Guo, Liyuan Zhang, Xinran Cui, Liang Cheng, Tianyi Zhao, Yadong Wang

Genom. Proteom. Bioinform., 2024

2023

Reply: Correspondence on NanoVar's performance outlined by Jiang T. et al. in 'Long-read sequencing settings for efficient structural variation detection based on comprehensive evaluation'.

Tao Jiang, Shiqi Liu, Hongzhe Guo

BMC Bioinform., December, 2023

MLSpatial: A machine-learning method to reconstruct the spatial distribution of cells from scRNA-seq by extracting spatial features.

Mengbo Zhu, Changjun Li, Kebo Lv, Hongzhe Guo, Rui Hou, Geng Tian, Jialiang Yang

Comput. Biol. Medicine, June, 2023

Identifying cancer driver genes using a two-stage random walk with restart on a gene interaction network.

Ping Meng, Guohua Wang, Hongzhe Guo, Tao Jiang

Comput. Biol. Medicine, May, 2023

Comprehensive evaluation of RNA-seq alignment methods based on long-read sequencing data.

Yadong Liu, Hongzhe Guo, Zhenhao Lu, Yadong Wang, Zhongyu Liu, Tao Jiang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022

New quantum codes derived from images of cyclic codes.

Shixin Zhu, Hongzhe Guo, Xiaoshan Kai, Zhonghua Sun

Quantum Inf. Process., 2022

Evaluation of classification in single cell atac-seq data with machine learning methods.

Hongzhe Guo, Zhongbo Yang, Tao Jiang, Shiqi Liu, Yadong Wang, Zhe Cui

BMC Bioinform., 2022

2021

deGSM: Memory Scalable Construction Of Large Scale de Bruijn Graph.

Hongzhe Guo, Yilei Fu, Yan Gao, Junyi Li, Yadong Wang, Bo Liu

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Long-read sequencing settings for efficient structural variation detection based on comprehensive evaluation.

Tao Jiang, Shiqi Liu, Shuqi Cao, Yadong Liu, Zhe Cui, Yadong Wang, Hongzhe Guo

BMC Bioinform., 2021

2019

Fast read alignment with incorporation of known genomic variants.

Hongzhe Guo, Bo Liu, Dengfeng Guan, Yilei Fu, Yadong Wang

BMC Medical Informatics Decis. Mak., 2019

2018

Fast variation-aware read alignment with deBGA-VARA.

Hongzhe Guo, Bo Liu, Dengfeng Guan, Yilei Fu, Yadong Wang

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2016

deBGA: read alignment with de Bruijn graph-based seed and extension.

Bo Liu, Hongzhe Guo, Michael Brudno, Yadong Wang

Bioinform., 2016