Hongjie Wu
Orcid: 0009-0007-3203-1521
According to our database1,
Hongjie Wu
authored at least 91 papers
between 2008 and 2025.
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Bibliography
2025
Neurocomputing, 2025
2024
IEEE Trans. Knowl. Data Eng., December, 2024
MultiModRLBP: A Deep Learning Approach for Multi-Modal RNA-Small Molecule Ligand Binding Sites Prediction.
IEEE J. Biomed. Health Informatics, August, 2024
GTAMP-DTA: Graph transformer combined with attention mechanism for drug-target binding affinity prediction.
Comput. Biol. Chem., February, 2024
AttentionMGT-DTA: A multi-modal drug-target affinity prediction using graph transformer and attention mechanism.
Neural Networks, January, 2024
Self-supervised Domain Adaptation with Significance-Oriented Masking for Pelvic Organ Prolapse detection.
Pattern Recognit. Lett., 2024
AMDGT: Attention aware multi-modal fusion using a dual graph transformer for drug-disease associations prediction.
Knowl. Based Syst., 2024
Drug repositioning by multi-aspect heterogeneous graph contrastive learning and positive-fusion negative sampling strategy.
Inf. Fusion, 2024
Proceedings of the 32nd ACM International Conference on Multimedia, MM 2024, Melbourne, VIC, Australia, 28 October 2024, 2024
Protein Manufacture: Protein Design Assisted by Machine Learning from Backbone to Sequence.
Proceedings of the Advanced Intelligent Computing in Bioinformatics, 2024
Feature Extraction Approach for Predicting Protein-DNA Binding Residues Using Transformer Encoder-Decoder Architecture.
Proceedings of the Advanced Intelligent Computing in Bioinformatics, 2024
2023
DeepMPSF: A Deep Learning Network for Predicting General Protein Phosphorylation Sites Based on Multiple Protein Sequence Features.
J. Chem. Inf. Model., November, 2023
Comput. Biol. Medicine, September, 2023
Extracting biomedical relation from cross-sentence text using syntactic dependency graph attention network.
J. Biomed. Informatics, August, 2023
Simultaneous Prediction of Interaction Sites on the Protein and Peptide Sides of Complexes through Multilayer Graph Convolutional Networks.
J. Chem. Inf. Model., April, 2023
Protein-DNA Binding Residues Prediction Using a Deep Learning Model With Hierarchical Feature Extraction.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023
MV-H-RKM: A Multiple View-Based Hypergraph Regularized Restricted Kernel Machine for Predicting DNA-Binding Proteins.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023
Preserving Local and Global Information: An Effective Metric-based Subspace Clustering.
Proceedings of the 31st ACM International Conference on Multimedia, 2023
ST-CA YOLOv5: Improved YOLOv5 Based on Swin Transformer and Coordinate Attention for Surface Defect Detection.
Proceedings of the International Joint Conference on Neural Networks, 2023
Proceedings of the Advanced Intelligent Computing Technology and Applications, 2023
A Transformer-Based Deep Learning Approach with Multi-layer Feature Processing for Accurate Prediction of Protein-DNA Binding Residues.
Proceedings of the Advanced Intelligent Computing Technology and Applications, 2023
Deep Learning-Based Prediction of Drug-Target Binding Affinities by Incorporating Local Structure of Protein.
Proceedings of the Advanced Intelligent Computing Technology and Applications, 2023
Proceedings of the IEEE International Conference on Data Mining, 2023
Proceedings of the Thirty-Seventh AAAI Conference on Artificial Intelligence, 2023
2022
IEEE ACM Trans. Comput. Biol. Bioinform., 2022
SemanticCAP: Chromatin Accessibility Prediction Enhanced by Features Learning from a Language Model.
CoRR, 2022
Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022
Using Deep Learning to Predict Transcription Factor Binding Sites Based on Multiple-omics Data.
Proceedings of the Intelligent Computing Theories and Application, 2022
Comprehensive Evaluation of BERT Model for DNA-Language for Prediction of DNA Sequence Binding Specificities in Fine-Tuning Phase.
Proceedings of the Intelligent Computing Theories and Application, 2022
An Effective Method for Yemeni License Plate Recognition Based on Deep Neural Networks.
Proceedings of the Intelligent Computing Methodologies - 18th International Conference, 2022
Proceedings of the Intelligent Computing Theories and Application, 2022
Proceedings of the Intelligent Computing Theories and Application, 2022
Proceedings of the Intelligent Computing Theories and Application, 2022
Drug-Target Interaction Prediction Based on Graph Neural Network and Recommendation System.
Proceedings of the Intelligent Computing Theories and Application, 2022
Proceedings of the Intelligent Computing Methodologies - 18th International Conference, 2022
2021
Empirical Potential Energy Function Toward ab Initio Folding G Protein-Coupled Receptors.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021
Flower growth status recognition method based on feature fusion convolutional neural network.
J. Comput. Methods Sci. Eng., 2021
Research on RNA secondary structure predicting via bidirectional recurrent neural network.
BMC Bioinform., 2021
Multi-zone Residential HVAC Control with Satisfying Occupants' Thermal Comfort Requirements and Saving Energy via Reinforcement Learning.
Proceedings of the Parallel and Distributed Computing, Applications and Technologies, 2021
Proceedings of the International Joint Conference on Neural Networks, 2021
Super-Large Medical Image Storage and Display Technology Based on Concentrated Points of Interest.
Proceedings of the Intelligent Computing Theories and Application, 2021
Using Deep Learning to Predict Transcription Factor Binding Sites Combining Raw DNA Sequence, Evolutionary Information and Epigenomic Data.
Proceedings of the Intelligent Computing Theories and Application, 2021
Serialized Local Feature Representation Learning for Infrared-Visible Person Re-identification.
Proceedings of the Intelligent Computing Theories and Application, 2021
Proceedings of the Intelligent Computing Theories and Application, 2021
Proceedings of the Intelligent Computing Theories and Application, 2021
Proceedings of the Intelligent Computing Theories and Application, 2021
Proceedings of the Intelligent Computing Theories and Application, 2021
A Reinforcement Learning-Based Model for Human MicroRNA-Disease Association Prediction.
Proceedings of the Intelligent Computing Theories and Application, 2021
Depth Factor Decomposition Machine Based on Multi-kernel Convolutional Neural Network for Click-Through Rate Prediction.
Proceedings of the BDE 2021: The 3rd International Conference on Big Data Engineering, Shanghai, China, May 29, 2021
2020
A Building Energy Consumption Prediction Method Based on Integration of a Deep Neural Network and Transfer Reinforcement Learning.
Int. J. Pattern Recognit. Artif. Intell., 2020
Predicting in-Vitro Transcription Factor Binding Sites with Deep Embedding Convolution Network.
Proceedings of the Intelligent Computing Theories and Application, 2020
Proceedings of the Intelligent Computing Theories and Application, 2020
Proceedings of the Intelligent Computing Theories and Application, 2020
Proceedings of the Intelligent Computing Theories and Application, 2020
A New Method Combining DNA Shape Features to Improve the Prediction Accuracy of Transcription Factor Binding Sites.
Proceedings of the Intelligent Computing Theories and Application, 2020
Proceedings of the Intelligent Computing Theories and Application, 2020
Proceedings of the Intelligent Computing Theories and Application, 2020
Three-Layer Dynamic Transfer Learning Language Model for E. Coli Promoter Classification.
Proceedings of the Intelligent Computing Theories and Application, 2020
2019
一种基于生成对抗网络的强化学习算法 (Reinforcement Learning Algorithm Based on Generative Adversarial Networks).
计算机科学, 2019
J. Comput. Methods Sci. Eng., 2019
Int. J. Pattern Recognit. Artif. Intell., 2019
Int. J. Comput. Appl. Technol., 2019
Research on predicting 2D-HP protein folding using reinforcement learning with full state space.
BMC Bioinform., 2019
BMC Bioinform., 2019
Predicting RNA secondary structure via adaptive deep recurrent neural networks with energy-based filter.
BMC Bioinform., 2019
Proceedings of the Intelligent Computing Theories and Application, 2019
Proceedings of the Intelligent Computing Theories and Application, 2019
Knowledge Based Helix Angle and Residue Distance Restraint Free Energy Terms of GPCRs.
Proceedings of the Intelligent Computing Theories and Application, 2019
2018
IEEE ACM Trans. Comput. Biol. Bioinform., 2018
A study on multi-dimension error compensation and application to the foundation pit monitoring.
J. Comput. Methods Sci. Eng., 2018
J. Comput. Methods Sci. Eng., 2018
Int. J. Pattern Recognit. Artif. Intell., 2018
Probing the functions of long non-coding RNAs by exploiting the topology of global association and interaction network.
Comput. Biol. Chem., 2018
Proceedings of the Intelligent Computing Theories and Application, 2018
Proceedings of the Intelligent Computing Theories and Application, 2018
Proceedings of the Intelligent Computing Methodologies - 14th International Conference, 2018
Proceedings of the Intelligent Computing Theories and Application, 2018
2017
Wirel. Pers. Commun., 2017
Deep Conditional Random Field Approach to Transmembrane Topology Prediction and Application to GPCR Three-Dimensional Structure Modeling.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017
Proceedings of the Intelligent Computing Methodologies - 13th International Conference, 2017
2016
Proceedings of the Intelligent Computing Theories and Application, 2016
Proceedings of the 14th International Conference on Control, 2016
2015
Proceedings of the Intelligence Science and Big Data Engineering. Big Data and Machine Learning Techniques, 2015
Predicting Helix Boundaries of α-Helix Transmembrane Protein with Feedback Conditional Random Fields.
Proceedings of the Intelligent Computing Theories and Methodologies, 2015
2014
BMC Bioinform., 2014
2013
patGPCR: A Multitemplate Approach for Improving 3D Structure Prediction of Transmembrane Helices of G-Protein-Coupled Receptors.
Comput. Math. Methods Medicine, 2013
A parallel ant colonies approach to de novo prediction of protein backbone in CASP8/9.
Sci. China Inf. Sci., 2013
2011
IEEE Trans. Veh. Technol., 2011
2008
Prognostic and Warning System for Power-Electronic Modules in Electric, Hybrid Electric, and Fuel-Cell Vehicles.
IEEE Trans. Ind. Electron., 2008