Hong-Yu Ou

Orcid: 0000-0001-9439-1660

According to our database1, Hong-Yu Ou authored at least 16 papers between 2003 and 2022.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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Links

Online presence:

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Bibliography

2022
VRprofile2: detection of antibiotic resistance-associated mobilome in bacterial pathogens.
Nucleic Acids Res., 2022

T4SEfinder: a bioinformatics tool for genome-scale prediction of bacterial type IV secreted effectors using pre-trained protein language model.
Briefings Bioinform., 2022

2019
ICEberg 2.0: an updated database of bacterial integrative and conjugative elements.
Nucleic Acids Res., 2019

OGG-Bac: Ontological Representation of Orthologous Bacterial Genes.
Proceedings of the 10th International Conference on Biomedical Ontology (ICBO 2019), Buffalo, New York, USA, July 30, 2019

ICEO: a Biological Ontology for Representing and Analyzing the Bacterial Integrative and Conjugative Element.
Proceedings of the 10th International Conference on Biomedical Ontology (ICBO 2019), Buffalo, New York, USA, July 30, 2019

2018
TADB 2.0: an updated database of bacterial type II toxin-antitoxin loci.
Nucleic Acids Res., 2018

oriTfinder: a web-based tool for the identification of origin of transfers in DNA sequences of bacterial mobile genetic elements.
Nucleic Acids Res., 2018

VRprofile: gene-cluster-detection-based profiling of virulence and antibiotic resistance traits encoded within genome sequences of pathogenic bacteria.
Briefings Bioinform., 2018

2013
SecReT4: a web-based bacterial type IV secretion system resource.
Nucleic Acids Res., 2013

2012
ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria.
Nucleic Acids Res., 2012

2011
TADB: a web-based resource for Type 2 toxin-antitoxin loci in bacteria and archaea.
Nucleic Acids Res., 2011

2010
mGenomeSubtractor: a web-based tool for parallel <i>in silico</i> subtractive hybridization analysis of multiple bacterial genomes.
Nucleic Acids Res., 2010

2007
MobilomeFINDER: web-based tools for <i>in silico</i> and experimental discovery of bacterial genomic islands.
Nucleic Acids Res., 2007

2004
EG: a database of essential genes.
Nucleic Acids Res., 2004

2003
Recognition of Translation Initiation Sites of Eukaryotic Genes Based on an EM Algorithm.
J. Comput. Biol., 2003

The Z curve database: a graphic representation of genome sequences.
Bioinform., 2003


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