Hilal Kazan

According to our database, Hilal Kazan authored at least 15 papers between 2010 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Predator: Predicting the Impact of Cancer Somatic Mutations on Protein-Protein Interactions.

Ibrahim Berber, Cesim Erten, Hilal Kazan

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

2022

PersonaDrive: a method for the identification and prioritization of personalized cancer drivers.

Cesim Erten, Aissa Houdjedj, Hilal Kazan, Ahmed Amine Taleb Bahmed

Bioinform., 2022

2021

Sparse data embedding and prediction by tropical matrix factorization.

Amra Omanovic, Hilal Kazan, Polona Oblak, Tomaz Curk

BMC Bioinform., 2021

Ranking cancer drivers via betweenness-based outlier detection and random walks.

Cesim Erten, Aissa Houdjedj, Hilal Kazan

BMC Bioinform., 2021

2020

Data embedding and prediction by sparse tropical matrix factorization.

Amra Omanovic, Hilal Kazan, Polona Oblak, Tomaz Curk

CoRR, 2020

MEXCOwalk: mutual exclusion and coverage based random walk to identify cancer modules.

Rafsan Ahmed, Ilyes Baali, Cesim Erten, Evis Hoxha, Hilal Kazan

Bioinform., 2020

2019

RBPSponge: genome-wide identification of lncRNAs that sponge RBPs.

Saber HafezQorani, Aissa Houdjedj, Mehmet Arici, Abdesselam Said, Hilal Kazan

Bioinform., 2019

2016

A comprehensive database of high-throughput sequencing-based RNA secondary structure probing data (Structure Surfer).

Nathan D. Berkowitz, Ian M. Silverman, Daniel M. Childress, Hilal Kazan, Li-San Wang, Brian D. Gregory

BMC Bioinform., 2016

JBASE: Joint Bayesian Analysis of Subphenotypes and Epistasis.

Recep Colak, TaeHyung Kim, Hilal Kazan, Yoomi Oh, Miguel Cruz, Adan Valladares-Salgado, Jesus Peralta, Jorge Escobedo, Esteban J. Parra, Philip M. Kim, Anna Goldenberg

Bioinform., 2016

2014

Target-Independent Prediction of Drug Synergies Using Only Drug Lipophilicity.

Kaan Yilancioglu, Zohar B. Weinstein, Cem Meydan, Azat Akhmetov, Isil Toprak, Arda Durmaz, Ivan Iossifov, Hilal Kazan, Frederick P. Roth, Murat Cokol

J. Chem. Inf. Model., 2014

2013

A compendium of RNA-binding motifs for decoding gene regulation.

Debashish Ray, Hilal Kazan, Kate B. Cook, Matthew T. Weirauch, Hamed S. Najafabadi, Xiao Li, Serge Gueroussov, Mihai Albu, Hong Zheng, Ally Yang, Hong Na, Manuel Irimia, Leah H. Matzat, Ryan K. Dale, Sarah A. Smith, Christopher A. Yarosh, Seth M. Kelly, Behnam Nabet, Desirea Mecenas, Weimin Li, Rakesh S. Laishram, Mei Qiao, Howard D. Lipshitz, Fabio Piano, Anita H. Corbett, Russ P. Carstens, Brendan J. Frey, Richard A. Anderson, Kristen W. Lynch, Luiz O. F. Penalva, Elissa P. Lei, Andrew G. Fraser, Benjamin J. Blencowe, Quaid Morris, Timothy R. Hughes

Nat., 2013

RBPmotif: a web server for the discovery of sequence and structure preferences of RNA-binding proteins.

Hilal Kazan, Quaid Morris

Nucleic Acids Res., 2013

2012

Inferring the Binding Preferences of RNA-binding Proteins.

Hilal Kazan

PhD thesis, 2012

2011

RBPDB: a database of RNA-binding specificities.

Kate B. Cook, Hilal Kazan, Khalid Zuberi, Quaid Morris, Timothy R. Hughes

Nucleic Acids Res., 2011

2010

RNAcontext: A New Method for Learning the Sequence and Structure Binding Preferences of RNA-Binding Proteins.

Hilal Kazan, Debashish Ray, Esther T. Chan, Timothy R. Hughes, Quaid Morris

PLoS Comput. Biol., 2010