Henry C. M. Leung

According to our database, Henry C. M. Leung authored at least 54 papers between 2004 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2020

MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read Metagenomics.

Wui Wang Lui, Amy Wing-Sze Leung, Henry C. M. Leung, Yan Xin, Jade L. L. Teng, Patrick C. Y. Woo, Tak Wah Lam, Ruibang Luo

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019

A powerful conditional gene-based association approach implicated functionally important genes for schizophrenia.

Miao-Xin Li, Lin Jiang, Timothy Shin Heng Mak, Johnny S. H. Kwan, Chao Xue, Peikai Chen, Henry Chi-Ming Leung, Liqian Cui, Tao Li, Pak Chung Sham

Bioinform., 2019

RENET: A Deep Learning Approach for Extracting Gene-Disease Associations from Literature.

Ye Wu, Ruibang Luo, Henry C. M. Leung, Hing-Fung Ting, Tak Wah Lam

Proceedings of the Research in Computational Molecular Biology, 2019

2018

AC-DIAMOND v1: accelerating large-scale DNA-protein alignment.

Huijun Mai, Yifan Zhang, Dinghua Li, Henry Chi-Ming Leung, Ruibang Luo, Chi-Kwong Wong, Hing-Fung Ting, Tak Wah Lam

Bioinform., 2018

MegaPath: Low-Similarity Pathogen Detection from Metagenomic NGS Data (Extended Abstract).

Dinghua Li, Henry Chi-Ming Leung, Chi-Kwong Wong, Yifan Zhang, Wai-Chun Law, Yan Xin, Ruibang Luo, Hing-Fung Ting, Tak Wah Lam

Proceedings of the 8th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2018

2017

MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs.

Dinghua Li, Yukun Huang, Henry C. M. Leung, Ruibang Luo, Hing-Fung Ting, Tak Wah Lam

BMC Bioinform., 2017

Mixed Membership Sparse Gaussian Conditional Random Fields.

Jie Yang, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin

Proceedings of the Advanced Data Mining and Applications - 13th International Conference, 2017

2016

AC-DIAMOND: Accelerating Protein Alignment via Better SIMD Parallelization and Space-Efficient Indexing.

Huijun Mai, Dinghua Li, Yifan Zhang, Henry Chi-Ming Leung, Ruibang Luo, Hing-Fung Ting, Tak Wah Lam

Proceedings of the Bioinformatics and Biomedical Engineering, 2016

2015

IDBA-MTP: A Hybrid Metatranscriptomic Assembler Based on Protein Information.

Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin

J. Comput. Biol., 2015

misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads.

Xiao Zhu, Henry C. M. Leung, Rongjie Wang, Francis Y. L. Chin, Siu-Ming Yiu, Guangri Quan, Yajie Li, Rui Zhang, Qinghua Jiang, Bo Liu, Yucui Dong, Guohui Zhou, Yadong Wang

BMC Bioinform., 2015

2014

MetaCluster-TA: taxonomic annotation for metagenomic data based on assembly-assisted binning.

Yi Wang, Henry Chi-Ming Leung, Siu-Ming Yiu, Francis Y. L. Chin

BMC Genom., 2014

Learning Sparse Gaussian Bayesian Network Structure by Variable Grouping.

Jie Yang, Henry C. M. Leung, Siu-Ming Yiu, Yunpeng Cai, Francis Y. L. Chin

Proceedings of the 2014 IEEE International Conference on Data Mining, 2014

Predicting drug-target interaction for new drugs using enhanced similarity measures and super-target clustering¹.

Jianyu Shi, Siu-Ming Yiu, Yiming Li, Henry C. M. Leung, Francis Y. L. Chin

Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2013

Deterministic polynomial-time algorithms for designing short DNA words.

Ming-Yang Kao, Henry C. M. Leung, He Sun, Yong Zhang

Theor. Comput. Sci., 2013

Non-adaptive complex group testing with multiple positive sets.

Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu

Theor. Comput. Sci., 2013

IDBA-MT: <i>De Novo</i> Assembler for Metatranscriptomic Data Generated from Next-Generation Sequencing Technology.

Henry C. M. Leung, Siu-Ming Yiu, John Parkinson, Francis Y. L. Chin

J. Comput. Biol., 2013

IDBA-tran: a more robust de novo de Bruijn graph assembler for transcriptomes with uneven expression levels.

Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Ming-Ju Lv, Xin-Guang Zhu, Francis Y. L. Chin

Bioinform., 2013

Reconstructing <i>k</i>-Reticulated Phylogenetic Network from a Set of Gene Trees.

Hoa Vu, Francis Y. L. Chin, Wing-Kai Hon, Henry C. M. Leung, Kunihiko Sadakane, Ken Wing-Kin Sung, Siu-Ming Yiu

Proceedings of the Bioinformatics Research and Applications, 9th International Symposium, 2013

Intra- and inter-sparse multiple output regression with application on environmental microbial community study.

Jie Yang, Henry C. M. Leung, Siu-Ming Yiu, Yunpeng Cai, Francis Y. L. Chin

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

PERGA: A Paired-End Read Guided De Novo Assembler for Extending Contigs Using SVM Approach.

Xiao Zhu, Henry C. M. Leung, Francis Y. L. Chin, Siu-Ming Yiu, Guangri Quan, Bo Liu, Yadong Wang

Proceedings of the ACM Conference on Bioinformatics, 2013

2012

MetaCluster 4.0: A Novel Binning Algorithm for NGS Reads and Huge Number of Species.

Yi Wang, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin

J. Comput. Biol., 2012

MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sample.

Yi Wang, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin

Bioinform., 2012

IDBA-UD: a <i>de novo</i> assembler for single-cell and metagenomic sequencing data with highly uneven depth.

Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin

Bioinform., 2012

Phylogenetic Tree Reconstruction with Protein Linkage.

Junjie Yu, Henry Chi-Ming Leung, Siu-Ming Yiu, Yong Zhang, Francis Y. L. Chin, Nathan Hobbs, Amy Y. X. Wang

Proceedings of the Bioinformatics Research and Applications - 8th International Symposium, 2012

2011

Meta-IDBA: a <i>de Novo</i> assembler for metagenomic data.

Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin

Bioinform., 2011

A robust and accurate binning algorithm for metagenomic sequences with arbitrary species abundance ratio.

Henry C. M. Leung, Siu-Ming Yiu, Bin Yang, Yu Peng, Yi Wang, Zhihua Liu, Jing-Chi Chen, Junjie Qin, Ruiqiang Li, Francis Y. L. Chin

Bioinform., 2011

T-IDBA: A de novo Iterative de Bruijn Graph Assembler for Transcriptome - (Extended Abstract).

Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin

Proceedings of the Research in Computational Molecular Biology, 2011

Adaptive Phenotype Testing for AND/OR Items.

Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu

Proceedings of the Algorithms and Computation - 22nd International Symposium, 2011

DMPFinder - Finding Differentiating Pathways with Gaps from Two Groups of Metabolic Networks.

Henry Chi-Ming Leung, Shuen-Yi Leung, Carlos Lu Xiang, Siu-Ming Yiu, Francis Yuk-Lun Chin

Proceedings of the ISCA 3rd International Conference on Bioinformatics and Computational Biology, 2011

2010

Unsupervised binning of environmental genomic fragments based on an error robust selection of <i>l</i>-mers.

Bin Yang, Yu Peng, Henry Chi-Ming Leung, Siu-Ming Yiu, Jing-Chi Chen, Francis Yuk-Lun Chin

BMC Bioinform., 2010

IDBA - A Practical Iterative de Bruijn Graph De Novo Assembler.

Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin

Proceedings of the Research in Computational Molecular Biology, 2010

Predicting metabolic pathways from metabolic networks with limited biological knowledge.

Shuen-Yi Leung, Henry C. M. Leung, Carlos Lu Xiang, Siu-Ming Yiu, Francis Y. L. Chin

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010

MetaCluster: unsupervised binning of environmental genomic fragments and taxonomic annotation.

Bin Yang, Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Junjie Qin, Ruiqiang Li, Francis Y. L. Chin

Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2009

Predicting Protein Complexes from PPI Data: A Core-Attachment Approach.

Henry C. M. Leung, Qian Xiang, Siu-Ming Yiu, Francis Y. L. Chin

J. Comput. Biol., 2009

Clustering-Based Approach for Predicting Motif Pairs from protein Interaction Data.

Henry Chi-Ming Leung, Man-Hung Siu, Siu-Ming Yiu, Francis Yuk-Lun Chin, Ken Wing-Kin Sung

J. Bioinform. Comput. Biol., 2009

Finding optimal threshold for correction error reads in DNA assembling.

Francis Y. L. Chin, Henry C. M. Leung, Wei-Lin Li, Siu-Ming Yiu

BMC Bioinform., 2009

Unsupervised binning of environmental genomic fragments based on an error robust selection of l-mers.

Bin Yang, Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Jing-Chi Chen, Francis Y. L. Chin

Proceedings of the Proceeding of the 3rd International Workshop on Data and Text Mining in Bioinformatics, 2009

2008

DNA Motif Representation with Nucleotide Dependency.

Francis Y. L. Chin, Henry C. M. Leung

IEEE ACM Trans. Comput. Biol. Bioinform., 2008

Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency.

Francis Y. L. Chin, Henry C. M. Leung, Man-Hung Siu, Siu-Ming Yiu

Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2008

2007

The Point Placement Problem on a Line - Improved Bounds for Pairwise Distance Queries.

Francis Y. L. Chin, Henry C. M. Leung, Wing-Kin Sung, Siu-Ming Yiu

Proceedings of the Algorithms in Bioinformatics, 7th International Workshop, 2007

Discovering Motifs With Transcription Factor Domain Knowledge.

Henry C. M. Leung, Francis Y. L. Chin, Bethany Man-Yee Chan

Proceedings of the Biocomputing 2007, 2007

2006

Motif discovery for DNA sequences

Henry C. M. Leung

PhD thesis, 2006

Changes in effective connectivity during incidental and intentional perception of fearful faces.

Giovanni de Marco, Monique de Bonis, P. Vrignaud, Henry C. M. Leung, I. Peretti

NeuroImage, 2006

Algorithms for Challenging Motif Problems.

Henry C. M. Leung, Francis Y. L. Chin

J. Bioinform. Comput. Biol., 2006

An efficient motif discovery algorithm with unknown motif length and number of binding sites.

Henry C. M. Leung, Francis Y. L. Chin

Int. J. Data Min. Bioinform., 2006

Finding motifs from all sequences with and without binding sites.

Henry C. M. Leung, Francis Y. L. Chin

Bioinform., 2006

Discovering DNA Motifs with Nucleotide Dependency.

Henry C. M. Leung, Francis Y. L. Chin

Proceedings of the Sixth IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2006), 2006

An Efficient Algorithm for String Motif Discovery.

Francis Y. L. Chin, Henry C. M. Leung

Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, 2006

2005

Finding Motifs with Insufficient Number of Strong Binding Sites.

Henry C. M. Leung, Francis Y. L. Chin, Siu-Ming Yiu, Ronald Rosenfeld, Wai Wan Tsang

J. Comput. Biol., 2005

Generalized Planted (<i>l</i>, <i>d</i>)-Motif Problem with Negative Set.

Henry C. M. Leung, Francis Y. L. Chin

Proceedings of the Algorithms in Bioinformatics, 5th International Workshop, 2005

Finding exact optimal motifs in matrix representation by partitioning.

Henry C. M. Leung, Francis Y. L. Chin

Proceedings of the ECCB/JBI'05 Proceedings, Fourth European Conference on Computational Biology/Sixth Meeting of the Spanish Bioinformatics Network (Jornadas de BioInformática), Palacio de Congresos, Madrid, Spain, September 28, 2005

An Efficient Algorithm for the Extended (l, d)-Motif Problem with Unknown Number of Binding Sites.

Henry C. M. Leung, Francis Y. L. Chin

Proceedings of the Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 2005

Voting algorithms for discovering long motifs.

Francis Y. L. Chin, Henry C. M. Leung

Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005

2004

Finding motifs for insufficient number of sequences with strong binding to transcription facto.

Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu, Tak Wah Lam, Roni Rosenfeld, Wai Wan Tsang, David K. Smith, Y. Jiang

Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004