Henk C. den Bakker

According to our database, Henk C. den Bakker authored at least 7 papers between 2018 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of five.

2024

Mashpit: sketching out genomic epidemiology.

Tongzhou Xu, Henk C. den Bakker, Xiangyu Deng, Lee S. Katz

J. Open Source Softw., December, 2024

Fasten: a toolkit for streaming operations on fastq files.

Lee S. Katz, John Phan, Henk C. den Bakker

J. Open Source Softw., February, 2024

2021

GIS as a heuristic tool to interpret ancient historiography: A case study to reconstruct what could plausibly have happened according to the accounts in New Testament texts.

Vincent van Altena, Jan Krans, Henk C. den Bakker, Jantien E. Stoter

Trans. GIS, 2021

SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data.

Taylor Griswold, Curtis Kapsak, Jessica C. Chen, Henk C. den Bakker, Grant Williams, Alyssa Kelley, Eshaw Vidyaprakash, Lee S. Katz

J. Open Source Softw., 2021

Sepia, a taxonomy oriented read classifier in Rust.

Henk C. den Bakker, Lee S. Katz

J. Open Source Softw., 2021

2019

Mashtree: a rapid comparison of whole genome sequence files.

Lee S. Katz, Taylor Griswold, Shatavia Morrison, Jason Caravas, Shaokang Zhang, Henk C. den Bakker, Xiangyu Deng, Heather Carleton

J. Open Source Softw., 2019

2018

Advancing New Testament interpretation through spatio-temporal analysis: Demonstrated by case studies.

Vincent van Altena, Henk C. den Bakker, Jantien E. Stoter

Trans. GIS, 2018