Hanspeter Herzel

According to our database, Hanspeter Herzel authored at least 40 papers between 1991 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

Weak coupling between intracellular feedback loops explains dissociation of clock gene dynamics.

Christoph Schmal, Daisuke Ono, Jihwan Myung, J. Patrick Pett, Sato Honma, Ken-ichi Honma, Hanspeter Herzel, Isao T. Tokuda

PLoS Comput. Biol., 2019

2018

Coherency of circadian rhythms in the SCN is governed by the interplay of two coupling factors.

Isao T. Tokuda, Daisuke Ono, Sato Honma, Ken-ichi Honma, Hanspeter Herzel

PLoS Comput. Biol., 2018

2017

Moran's I quantifies spatio-temporal pattern formation in neural imaging data.

Christoph Schmal, Jihwan Myung, Hanspeter Herzel, Grigory V. Bordyugov

Bioinform., 2017

2016

Feedback Loops of the Mammalian Circadian Clock Constitute Repressilator.

J. Patrick Pett, Anja Korencic, Felix Wesener, Achim Kramer, Hanspeter Herzel

PLoS Comput. Biol., 2016

2015

Mining for novel candidate clock genes in the circadian regulatory network.

Anuprabha Bhargava, Hanspeter Herzel, Bharath Ananthasubramaniam

BMC Syst. Biol., 2015

2014

Timing of Neuropeptide Coupling Determines Synchrony and Entrainment in the Mammalian Circadian Clock.

Bharath Ananthasubramaniam, Erik D. Herzog, Hanspeter Herzel

PLoS Comput. Biol., 2014

Elucidating the adaptation and temporal coordination of metabolic pathways using in-silico evolution.

Willi Gottstein, Stefan Müller, Hanspeter Herzel, Ralf Steuer

Biosyst., 2014

2011

Tuning the Mammalian Circadian Clock: Robust Synergy of Two Loops.

Angela Relógio, Pål O. Westermark, Thomas Wallach, Katja Schellenberg, Achim Kramer, Hanspeter Herzel

PLoS Comput. Biol., 2011

2010

Tumor Growth Rate Determines the Timing of Optimal Chronomodulated Treatment Schedules.

Samuel Bernard, Branka Cajavec Bernard, Francis Lévi, Hanspeter Herzel

PLoS Comput. Biol., 2010

2009

Quantification of Circadian Rhythms in Single Cells.

Pål O. Westermark, David K. Welsh, Hitoshi Okamura, Hanspeter Herzel

PLoS Comput. Biol., 2009

2008

Global parameter search reveals design principles of the mammalian circadian clock.

James C. W. Locke, Pål O. Westermark, Achim Kramer, Hanspeter Herzel

BMC Syst. Biol., 2008

Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis.

Matthias E. Futschik, Hanspeter Herzel

Bioinform., 2008

2007

Synchronization-Induced Rhythmicity of Circadian Oscillators in the Suprachiasmatic Nucleus.

Samuel Bernard, Didier Gonze, Branka Cajavec, Hanspeter Herzel, Achim Kramer

PLoS Comput. Biol., 2007

UniHI: an entry gate to the human protein interactome.

Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik

Nucleic Acids Res., 2007

Functional and Transcriptional Coherency of Modules in the Human Protein Interaction Network .

Matthias E. Futschik, Gautam Chaurasia, Anna Tschaut, Jenny Russ, M. Madan Babu, Hanspeter Herzel

J. Integr. Bioinform., 2007

Flexible web-based integration of distributed large-scale human protein interaction maps.

Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik

J. Integr. Bioinform., 2007

Comparison of human protein-protein interaction maps.

Matthias E. Futschik, Gautam Chaurasia, Hanspeter Herzel

Bioinform., 2007

Are we Overestimating the Number of Cell-Cycling Genes? The Impact of Background Models.

Matthias E. Futschik, Hanspeter Herzel

Proceedings of the German Conference on Bioinformatics, 2007

2006

Mathematical Modeling Identifies Inhibitors of Apoptosis as Mediators of Positive Feedback and Bistability.

Stefan Legewie, Nils Blüthgen, Hanspeter Herzel

PLoS Comput. Biol., 2006

DNA Motifs and Sequence Periodicities.

Lokesh Kumar, Matthias E. Futschik, Hanspeter Herzel

Silico Biol., 2006

Comparison of Human Protein-Protein Interaction Maps.

Matthias E. Futschik, Gautam Chaurasia, Erich E. Wanker, Hanspeter Herzel

Proceedings of the German Conference on Bioinformatics GCB 2006, 19.09. 2006, 2006

2005

Ultrasensitization: Switch-Like Regulation of Cellular Signaling by Transcriptional Induction.

Stefan Legewie, Nils Blüthgen, Reinhold Schäfer, Hanspeter Herzel

PLoS Comput. Biol., 2005

HuSiDa - the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells.

Matthias Truss, Maciej Swat, Szymon M. Kielbasa, Reinhold Schäfer, Hanspeter Herzel, Christian Hagemeier

Nucleic Acids Res., 2005

Measuring similarities between transcription factor binding sites.

Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel

BMC Bioinform., 2005

Two-mass models of the bird syrinx.

Riccardo Zaccarelli, Coen Elemans, W. Tecumseh Fitch, Hanspeter Herzel

Proceedings of the Fourth International Workshop on Models and Analysis of Vocal Emissions for Biomedical Applications, 2005

2004

Bifurcation analysis of the regulatory modules of the mammalian G1/S transition.

Maciej Swat, Alexander E. Kel, Hanspeter Herzel

Bioinform., 2004

HOMGL - comparing genelists across species and with different accession numbers.

Nils Blüthgen, Szymon M. Kielbasa, Branka Cajavec, Hanspeter Herzel

Bioinform., 2004

Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors.

Szymon M. Kielbasa, Nils Blüthgen, Hanspeter Herzel

Proceedings of the German Conference on Bioinformatics (GCB 2004), Bielefeld, 2004

2003

Optimizing Property Codes in Protein Data Reveals Structural Characteristics.

Olaf Weiss, Andreas Ziehe, Hanspeter Herzel

Proceedings of the Artificial Neural Networks and Neural Information Processing, 2003

Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules.

Maciej Swat, Alexander E. Kel, Szymon M. Kielbasa, Hanspeter Herzel

Proceedings of the German Conference on Bioinformatics, 2003

2001

Combining frequency and positional information to predict transcription factor binding sites.

Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel

Bioinform., 2001

2000

Peptide Binding Landscapes.

Johannes Schuchhardt, Liying Dong, Ulrich Hoffmüller, Achim Kramer, Jens Schneider-Mergener, Hanspeter Herzel

Proceedings of the German Conference on Bioinformatics (GCB 2000), 2000

Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search.

Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel

Proceedings of the German Conference on Bioinformatics (GCB 2000), 2000

Reliability of Microarray Data and Clustering.

Dieter Beule, Johannes Schuchhardt, Arif Malik, Holger Eickhoff, Hans Lehrach, Hanspeter Herzel

Proceedings of the German Conference on Bioinformatics (GCB 2000), 2000

1999

10-11 bp periodicities in complete genomes reflect protein structure and DNA folding.

Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov

Bioinform., 1999

Mutual Information Analysis of Surrogate Gene Expression Data.

Dirk Holste, Dieter Beule, Wolfram Liebermeister, Johannes Schuchhardt, Hanspeter Herzel

Proceedings of the German Conference on Bioinformatics, 1999

1998

Property Codes in Sets of Protein Sequences.

Olaf Weiss, Hanspeter Herzel

Proceedings of the German Conference on Bioinformatics, 1998

Sequence Periodicities in Complete Genomes Reflect Supercoiling.

Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov

Proceedings of the German Conference on Bioinformatics, 1998

1997

Modelling biphonation - The role of the vocal tract.

Patrick Mergell, Hanspeter Herzel

Speech Commun., 1997

1991

Evidence of chaos in phonatory samples.

Hanspeter Herzel, J. Wendler

Proceedings of the Second European Conference on Speech Communication and Technology, 1991