Haidong Yi

According to our database, Haidong Yi authored at least 19 papers between 2017 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Set-based Modeling and Applications in single-cell Bioinformatics.

Haidong Yi

PhD thesis, 2024

Conditional Similarity Triplets Enable Covariate-Informed Representations of Single-Cell Data.

Chi-Jane Chen, Haidong Yi, Natalie Stanley

CoRR, 2024

2022

Interpretable Single-Cell Set Classification with Kernel Mean Embeddings.

Siyuan Shan, Vishal Baskaran, Haidong Yi, Jolene Ranek, Natalie Stanley, Junier Oliva

CoRR, 2022

CytoEMD: detecting and visualizing between-sample variation in relation to phenotype with earth mover's distance.

Haidong Yi, Natalie Stanley

Proceedings of the BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7, 2022

Transparent single-cell set classification with kernel mean embeddings.

Siyuan Shan, Vishal Athreya Baskaran, Haidong Yi, Jolene Ranek, Natalie Stanley, Junier B. Oliva

Proceedings of the BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7, 2022

2021

AcrDB: a database of anti-CRISPR operons in prokaryotes and viruses.

Le Huang, Bowen Yang, Haidong Yi, Amina Asif, Jiawei Wang, Trevor Lithgow, Han Zhang, Fayyaz ul Amir Afsar Minhas, Yanbin Yin

Nucleic Acids Res., 2021

dbCAN-PUL: a database of experimentally characterized CAZyme gene clusters and their substrates.

Catherine Ausland, Jinfang Zheng, Haidong Yi, Bowen Yang, Tang Li, Xuehuan Feng, Bo Zheng, Yanbin Yin

Nucleic Acids Res., 2021

COBRAC: a fast implementation of convex biclustering with compression.

Haidong Yi, Le Huang, Gal Mishne, Eric C. Chi

Bioinform., 2021

CytoSet: predicting clinical outcomes via set-modeling of cytometry data.

Haidong Yi, Natalie Stanley

Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021

2020

AcrFinder: genome mining anti-CRISPR operons in prokaryotes and their viruses.

Haidong Yi, Le Huang, Bowen Yang, Javi Gomez, Han Zhang, Yanbin Yin

Nucleic Acids Res., 2020

GDASC: a GPU parallel-based web server for detecting hidden batch factors.

Xiao Wang, Haidong Yi, Jia Wang, Zhandong Liu, Yanbin Yin, Han Zhang

Bioinform., 2020

Exchangeable Neural ODE for Set Modeling.

Yang Li, Haidong Yi, Christopher M. Bender, Siyuan Shan, Junier B. Oliva

Proceedings of the Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, 2020

2019

A 0.2-V Energy-Harvesting BLE Transmitter With a Micropower Manager Achieving 25% System Efficiency at 0-dBm Output and 5.2-nW Sleep Power in 28-nm CMOS.

Shiheng Yang, Jun Yin, Haidong Yi, Wei-Han Yu, Pui-In Mak, Rui Paulo Martins

IEEE J. Solid State Circuits, 2019

2018

A 0.032-mm² 0.15-V Three-Stage Charge-Pump Scheme Using a Differential Bootstrapped Ring-VCO for Energy-Harvesting Applications.

Haidong Yi, Jun Yin, Pui-In Mak, Rui Paulo Martins

IEEE Trans. Circuits Syst. II Express Briefs, 2018

dbCAN-seq: a database of carbohydrate-active enzyme (CAZyme) sequence and annotation.

Le Huang, Han Zhang, Peizhi Wu, Sarah Entwistle, Xueqiong Li, Tanner Yohe, Haidong Yi, Zhenglu Yang, Yanbin Yin

Nucleic Acids Res., 2018

A 0.18-V 382-µW Bluetooth Low-Energy Receiver Front-End With 1.33-nW Sleep Power for Energy-Harvesting Applications in 28-nm CMOS.

Haidong Yi, Wei-Han Yu, Pui-In Mak, Jun Yin, Rui Paulo Martins

IEEE J. Solid State Circuits, 2018

Detecting hidden batch factors through data-adaptive adjustment for biological effects.

Haidong Yi, Ayush T. Raman, Han Zhang, Genevera I. Allen, Zhandong Liu

Bioinform., 2018

A 0.2V energy-harvesting BLE transmitter with a micropower manager achieving 25% system efficiency at 0dBm output and 5.2nW sleep power in 28nm CMOS.

Jun Yin, Shiheng Yang, Haidong Yi, Wei-Han Yu, Pui-In Mak, Rui Paulo Martins

Proceedings of the 2018 IEEE International Solid-State Circuits Conference, 2018

2017

24.4 A 0.18V 382µW bluetooth low-energy (BLE) receiver with 1.33nW sleep power for energy-harvesting applications in 28nm CMOS.

Wei-Han Yu, Haidong Yi, Pui-In Mak, Jun Yin, Rui Paulo Martins

Proceedings of the 2017 IEEE International Solid-State Circuits Conference, 2017